Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078332

Identifier: 170078332

GI number: 170078332

Start: 1812429

End: 1812812

Strand: Direct

Name: 170078332

Synonym: SYNPCC7002_A1725

Alternate gene names: NA

Gene position: 1812429-1812812 (Clockwise)

Preceding gene: 170078331

Following gene: 170078333

Centisome position: 60.25

GC content: 48.18

Gene sequence:

>384_bases
ATGACAACGCTGAAAACGCCCATTACGCTACATCTTGACCGTGATGCAGTGAGTTTGGGAGAGAGATTATCGGGTGATTT
TGTCTGGCAGCCAGAAGATACGGAACGTTGCCCGAAAAAAGCGACGGTTTCTATTCTGTGGTCAACGGAAGGCCGAGGCA
AAGGCGATCGCCACAGGGTCAGTTCCCAAATCCTTGACCCAAATATGGTGCTGAATCTCATGGAACGAAACCATCCTTTT
ACGTTTGAGATTCCGTTGGATGCGCCTATTTCCTACGATGGCTTTTTATTTCGGTTGATGTGGTCTGTGGAAGTGCGGAT
CACGTTTCCAGGCTTGTTTAGCGACAAAGATACAGCGGTAGCTCCTTTTCAGGTATTGGCTTAG

Upstream 100 bases:

>100_bases
CGCCCCACAATCAACTGCGCTGGGAACTTCAGGTGCGTTGTCATTTGCCCCAGGTTGTGCGGGATACATCTTTTTTTAAG
TTAAGGGTGGTGAGGAGACC

Downstream 100 bases:

>100_bases
GCATGGCGACAAATCCTTACCAGGCCATCGGTTTACGGCACAATCCCTTTATCGGCACGGAACAACTGGCGCAGACGGTC
ACTTTTTGGCTGGATCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTTLKTPITLHLDRDAVSLGERLSGDFVWQPEDTERCPKKATVSILWSTEGRGKGDRHRVSSQILDPNMVLNLMERNHPF
TFEIPLDAPISYDGFLFRLMWSVEVRITFPGLFSDKDTAVAPFQVLA

Sequences:

>Translated_127_residues
MTTLKTPITLHLDRDAVSLGERLSGDFVWQPEDTERCPKKATVSILWSTEGRGKGDRHRVSSQILDPNMVLNLMERNHPF
TFEIPLDAPISYDGFLFRLMWSVEVRITFPGLFSDKDTAVAPFQVLA
>Mature_126_residues
TTLKTPITLHLDRDAVSLGERLSGDFVWQPEDTERCPKKATVSILWSTEGRGKGDRHRVSSQILDPNMVLNLMERNHPFT
FEIPLDAPISYDGFLFRLMWSVEVRITFPGLFSDKDTAVAPFQVLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14435; Mature: 14304

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLKTPITLHLDRDAVSLGERLSGDFVWQPEDTERCPKKATVSILWSTEGRGKGDRHRV
CCCCCCCEEEEECCCHHHHHHHCCCCEEECCCCHHHCCCCCEEEEEEECCCCCCCCHHHH
SSQILDPNMVLNLMERNHPFTFEIPLDAPISYDGFLFRLMWSVEVRITFPGLFSDKDTAV
HHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCC
APFQVLA
CCEEECC
>Mature Secondary Structure 
TTLKTPITLHLDRDAVSLGERLSGDFVWQPEDTERCPKKATVSILWSTEGRGKGDRHRV
CCCCCCEEEEECCCHHHHHHHCCCCEEECCCCHHHCCCCCEEEEEEECCCCCCCCHHHH
SSQILDPNMVLNLMERNHPFTFEIPLDAPISYDGFLFRLMWSVEVRITFPGLFSDKDTAV
HHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCC
APFQVLA
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA