Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078306

Identifier: 170078306

GI number: 170078306

Start: 1781772

End: 1783505

Strand: Direct

Name: 170078306

Synonym: SYNPCC7002_A1699

Alternate gene names: NA

Gene position: 1781772-1783505 (Clockwise)

Preceding gene: 170078305

Following gene: 170078307

Centisome position: 59.23

GC content: 35.47

Gene sequence:

>1734_bases
ATGGTTTTGCCACTAATTGCGCCACTGATCGGTGGTGTTCTTTCAGGAGTTGGTCTTGCAGCGGGAAAAACATTATTTGA
CAAATTTACAAAAAAGAATAGTTCGAGTATCACACCAGCAACGCCTGTTGCCATTGAAAAAGACGATCGATATCAAAAGC
TATTACAGCAATATGTAATCCAGCAAGAAAAAAGGGAAGCTGAGTTAAAGCAATTAGTCTTTGCTTCTACAAAGATGCAA
GGTCAAATGATTTTGCAGGAGGAAAAATGGAAGGAACTAAATTATCAACAGCAGCAGCAACTCATTGATAATGCCGCTCA
ACATAATCAGCGTATTGCAGAGTTAAAAGCCCAGGAGCTAGAGCAAGTTAAAGAACTGGAGCAATTAAAGCTGTCGCTGA
TGGAGCAATGGCATCGAGAAAAATTTAGCCAGCAAAATCGCCAAATCTTACAGCAGTGGGATTTAAGCAACTGGAACTCC
AAATTAAATCGAGAGGAAACAGAAGATTTACTGCAACCAAAAGAGTTTAAGCATCGACTGCTGACTTTGGTCTCGCGCCC
AAAAATTGTAGGCAATGATCTTTTTTGTCTTGATGTTCTCCATGAGCAAATCAAAAGTAGTCTTTTTGATCTAAATGAAC
ATATTCCTAGATCAGAATTAGAAGTTTACTGCGACTATTTTAAAAGTCCAATCGAAGATACTGATATTCCTAGGGTACAA
AAAATCCTAAATAGTATTCCAACTCTAATTCTCTCAACCAAGATTATCCGTAATCGGATCTATTTTAGTGGTGTCTTTTG
GGGAATGGGAGACGAAGAAAATATAATAATTCAGCCTCCTGCTTGGGATATGTCTGAGATTTTTAAACAATCAGATGACC
AGGAAGAAGCCATTCTCCAAATTGAGGAAACAATTTCTTATATCCAAAAAATCCTCATTGTTTATATCAAAGATCTATAT
TTTTTGAGCTTTAATTTTTACTACGAGCCGACAATACTATCCAACGAATTCCAGAATATCTTTTCAGAGAGTATTGCAAC
AACATGTGAATCCTTAAAGGAATCCCTTAGATCAGCTCATGCTGAACAGATCAAACGACTCAAGGTAATGCGAGAAGAAA
ATCAGTCAAAATTTAACAAAAATACAATATCAAAATCACAAATTTACGATTTTTCTTTTGAACAAAAACATGCTTCAATA
AGTGAATTGTTTCACCCCAAAAACATTGATTATCTTGACGGTTTACGTGAGGCTCAAATAGACCAATTACTTAATGCTCT
CGTCAGCAAAAAATCAAGTGAGAACGATGCATTGTTTGTGTGTTTGGATTTGGGTCTAACACATTATGATATGGGGAAAT
ATGAGTTTGCCATAACAGACTTCAGTAAGGCTATATCGCTAGATCCCAATGATGATGTTTTTTATCGACTCAGAGGCGAT
TCGTACTATTGTTTAAAAAAATACAGTGAAGCAATAGAAGACTATGGTGAAGCAATTAGGCTAAACAAGTTAATTAAGTT
GTACTTAAATTCTGAATACCATAATTGCTCTGGATACTACAATATGCGAGGTGTTGCATGCTATCGCCTGGAGAAATACA
CAGAGGCATTACAAGATTTTGAAAATGCTCTTAGATTAAATCCCCAAAATCAAAATTCAATATATCTGGATAATAAAAAC
CAAATCAAAAAAATTGTCAACTTCGAATCTGAATCAGATGATATGTTATTTTGA

Upstream 100 bases:

>100_bases
CGGTGATGGTGTCGCGGATGTGTTTCAAGACTTCCTCGCGAGTCTCGGAAATGTTTTTGAAGATTTACTTTAACTTAATC
ACTGTTTTAGAGAATAAAAA

Downstream 100 bases:

>100_bases
CTAAGATTATTTTCGAAGTTTTTTCTGAAGTGAGTTTTTGTTTGACGATAGTGCAATCTTTTTGTTTGTCAACAGGATCC
AGTCCTCGATCAATGGCTAG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Family Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; WD40 Domain-Containing Protein; GUN4 Domain-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; Serine/Threonine Protein Kinase

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MVLPLIAPLIGGVLSGVGLAAGKTLFDKFTKKNSSSITPATPVAIEKDDRYQKLLQQYVIQQEKREAELKQLVFASTKMQ
GQMILQEEKWKELNYQQQQQLIDNAAQHNQRIAELKAQELEQVKELEQLKLSLMEQWHREKFSQQNRQILQQWDLSNWNS
KLNREETEDLLQPKEFKHRLLTLVSRPKIVGNDLFCLDVLHEQIKSSLFDLNEHIPRSELEVYCDYFKSPIEDTDIPRVQ
KILNSIPTLILSTKIIRNRIYFSGVFWGMGDEENIIIQPPAWDMSEIFKQSDDQEEAILQIEETISYIQKILIVYIKDLY
FLSFNFYYEPTILSNEFQNIFSESIATTCESLKESLRSAHAEQIKRLKVMREENQSKFNKNTISKSQIYDFSFEQKHASI
SELFHPKNIDYLDGLREAQIDQLLNALVSKKSSENDALFVCLDLGLTHYDMGKYEFAITDFSKAISLDPNDDVFYRLRGD
SYYCLKKYSEAIEDYGEAIRLNKLIKLYLNSEYHNCSGYYNMRGVACYRLEKYTEALQDFENALRLNPQNQNSIYLDNKN
QIKKIVNFESESDDMLF

Sequences:

>Translated_577_residues
MVLPLIAPLIGGVLSGVGLAAGKTLFDKFTKKNSSSITPATPVAIEKDDRYQKLLQQYVIQQEKREAELKQLVFASTKMQ
GQMILQEEKWKELNYQQQQQLIDNAAQHNQRIAELKAQELEQVKELEQLKLSLMEQWHREKFSQQNRQILQQWDLSNWNS
KLNREETEDLLQPKEFKHRLLTLVSRPKIVGNDLFCLDVLHEQIKSSLFDLNEHIPRSELEVYCDYFKSPIEDTDIPRVQ
KILNSIPTLILSTKIIRNRIYFSGVFWGMGDEENIIIQPPAWDMSEIFKQSDDQEEAILQIEETISYIQKILIVYIKDLY
FLSFNFYYEPTILSNEFQNIFSESIATTCESLKESLRSAHAEQIKRLKVMREENQSKFNKNTISKSQIYDFSFEQKHASI
SELFHPKNIDYLDGLREAQIDQLLNALVSKKSSENDALFVCLDLGLTHYDMGKYEFAITDFSKAISLDPNDDVFYRLRGD
SYYCLKKYSEAIEDYGEAIRLNKLIKLYLNSEYHNCSGYYNMRGVACYRLEKYTEALQDFENALRLNPQNQNSIYLDNKN
QIKKIVNFESESDDMLF
>Mature_577_residues
MVLPLIAPLIGGVLSGVGLAAGKTLFDKFTKKNSSSITPATPVAIEKDDRYQKLLQQYVIQQEKREAELKQLVFASTKMQ
GQMILQEEKWKELNYQQQQQLIDNAAQHNQRIAELKAQELEQVKELEQLKLSLMEQWHREKFSQQNRQILQQWDLSNWNS
KLNREETEDLLQPKEFKHRLLTLVSRPKIVGNDLFCLDVLHEQIKSSLFDLNEHIPRSELEVYCDYFKSPIEDTDIPRVQ
KILNSIPTLILSTKIIRNRIYFSGVFWGMGDEENIIIQPPAWDMSEIFKQSDDQEEAILQIEETISYIQKILIVYIKDLY
FLSFNFYYEPTILSNEFQNIFSESIATTCESLKESLRSAHAEQIKRLKVMREENQSKFNKNTISKSQIYDFSFEQKHASI
SELFHPKNIDYLDGLREAQIDQLLNALVSKKSSENDALFVCLDLGLTHYDMGKYEFAITDFSKAISLDPNDDVFYRLRGD
SYYCLKKYSEAIEDYGEAIRLNKLIKLYLNSEYHNCSGYYNMRGVACYRLEKYTEALQDFENALRLNPQNQNSIYLDNKN
QIKKIVNFESESDDMLF

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67575; Mature: 67575

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure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HHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA