| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170078305
Identifier: 170078305
GI number: 170078305
Start: 1781448
End: 1781744
Strand: Direct
Name: 170078305
Synonym: SYNPCC7002_A1698
Alternate gene names: NA
Gene position: 1781448-1781744 (Clockwise)
Preceding gene: 170078304
Following gene: 170078306
Centisome position: 59.22
GC content: 45.12
Gene sequence:
>297_bases ATGACGGATTTCATTAACGAGCCTATTTACGAAGGTAAGCCTGATCTGCAATGGATAGAATCCTATGTTCGTGGCAATGG CACTGTCGTTGATGGTCATTGGAGAACAGACCCCAATGGAACCATTGCAGATAATCTCGATACGGATGTAGATGGCGATG GCATTCCAGGCTTTTTTGATGCGGATGCCGATGGTGATGGATGGTTAGAAGCAGTTGATACTGACGGTGATGGTGTCGCG GATGTGTTTCAAGACTTCCTCGCGAGTCTCGGAAATGTTTTTGAAGATTTACTTTAA
Upstream 100 bases:
>100_bases GTAAATATTGCCTAACTTTTCTGCTGGTTTAGTGTATGACCTAAATTAACTGGTTATAATTGGAAAATCTACACCTACTT TCCTTAGTTCTGGTGCCATT
Downstream 100 bases:
>100_bases CTTAATCACTGTTTTAGAGAATAAAAAATGGTTTTGCCACTAATTGCGCCACTGATCGGTGGTGTTCTTTCAGGAGTTGG TCTTGCAGCGGGAAAAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTDFINEPIYEGKPDLQWIESYVRGNGTVVDGHWRTDPNGTIADNLDTDVDGDGIPGFFDADADGDGWLEAVDTDGDGVA DVFQDFLASLGNVFEDLL
Sequences:
>Translated_98_residues MTDFINEPIYEGKPDLQWIESYVRGNGTVVDGHWRTDPNGTIADNLDTDVDGDGIPGFFDADADGDGWLEAVDTDGDGVA DVFQDFLASLGNVFEDLL >Mature_97_residues TDFINEPIYEGKPDLQWIESYVRGNGTVVDGHWRTDPNGTIADNLDTDVDGDGIPGFFDADADGDGWLEAVDTDGDGVAD VFQDFLASLGNVFEDLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10642; Mature: 10511
Theoretical pI: Translated: 3.32; Mature: 3.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFINEPIYEGKPDLQWIESYVRGNGTVVDGHWRTDPNGTIADNLDTDVDGDGIPGFFD CCCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADADGDGWLEAVDTDGDGVADVFQDFLASLGNVFEDLL CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TDFINEPIYEGKPDLQWIESYVRGNGTVVDGHWRTDPNGTIADNLDTDVDGDGIPGFFD CCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADADGDGWLEAVDTDGDGVADVFQDFLASLGNVFEDLL CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA