Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078307

Identifier: 170078307

GI number: 170078307

Start: 1783657

End: 1784421

Strand: Direct

Name: 170078307

Synonym: SYNPCC7002_A1700

Alternate gene names: NA

Gene position: 1783657-1784421 (Clockwise)

Preceding gene: 170078306

Following gene: 170078308

Centisome position: 59.3

GC content: 51.37

Gene sequence:

>765_bases
ATGTTTTATCTATCCCAAGCCCATCTCGAACGCTTCCAACGCTGCCCGCCAGCCTTCCAAGCCCTTTATCTAGAGCAACT
GACGGCTCCCAACAACCCAGATTATCTGGAAAATCAGCAATGGGGCATCCGATTTCACCAGGCGATGCAACAACTCCAGC
TAGGCTTGCCCCCAGCGCAAATTACCACAGACTCCAATCTCCACCAGAGTCTCCAAGCCCTGCTCACCGCCCAACCCCAA
CTCCTCGACCAACAGCAACAAACTGCCGCCGAATACCGCCGCACCCTGATGATGGGCAATTTTCTGCTCACGATTATTTG
TGATTGGATCAATTTTGGTGCTGAGACCCTCCAAATTTACGACTGGAAAACCTACCGTCAACCCCGCCAAAGCGATGATC
TAAAAGACCACTGGCAAACGAAGCTCTATCTTTATGTCATGGCCGAGACCACGGGTTATCAGCCGGAGCAACTCGTGATG
ACTTACTGGTTTATCGCCCCAGGTCAAGCGCCCCAATCCCTGACATTTCAATATGATCAGACTTGGCATCAGCACATCCA
CACTGAACTGGTCGCCCTGCTGACCCAACTGCAACGGGATTTAGAGCAATACCTTCAAGATGGTACGCCTTTGCACCATG
GCGATCGCCAAATTTGTCCCCATTGCCCACCCCATCAGCATTTTTCCGAGGTTGAAACCCTAGATTTTCTCGCCGGGAAA
AGCCTAGAGGACTTTCTGGGGGAGATTGAAGCAGTACAATTGTAG

Upstream 100 bases:

>100_bases
TGCAATCTTTTTGTTTGTCAACAGGATCCAGTCCTCGATCAATGGCTAGTTTGTTCCCATAGCGTTGTTGCAAAATTTCT
CCTAAACTTTGGCTCTGTAA

Downstream 100 bases:

>100_bases
ACGCACCATTCATCCAGAAGCACAAACCCCAGACCAGATTTATGGCGACAGAATTGCACACAGAGCTAGAAGAAGCCGTC
CGATTGCGACGGAATTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFYLSQAHLERFQRCPPAFQALYLEQLTAPNNPDYLENQQWGIRFHQAMQQLQLGLPPAQITTDSNLHQSLQALLTAQPQ
LLDQQQQTAAEYRRTLMMGNFLLTIICDWINFGAETLQIYDWKTYRQPRQSDDLKDHWQTKLYLYVMAETTGYQPEQLVM
TYWFIAPGQAPQSLTFQYDQTWHQHIHTELVALLTQLQRDLEQYLQDGTPLHHGDRQICPHCPPHQHFSEVETLDFLAGK
SLEDFLGEIEAVQL

Sequences:

>Translated_254_residues
MFYLSQAHLERFQRCPPAFQALYLEQLTAPNNPDYLENQQWGIRFHQAMQQLQLGLPPAQITTDSNLHQSLQALLTAQPQ
LLDQQQQTAAEYRRTLMMGNFLLTIICDWINFGAETLQIYDWKTYRQPRQSDDLKDHWQTKLYLYVMAETTGYQPEQLVM
TYWFIAPGQAPQSLTFQYDQTWHQHIHTELVALLTQLQRDLEQYLQDGTPLHHGDRQICPHCPPHQHFSEVETLDFLAGK
SLEDFLGEIEAVQL
>Mature_254_residues
MFYLSQAHLERFQRCPPAFQALYLEQLTAPNNPDYLENQQWGIRFHQAMQQLQLGLPPAQITTDSNLHQSLQALLTAQPQ
LLDQQQQTAAEYRRTLMMGNFLLTIICDWINFGAETLQIYDWKTYRQPRQSDDLKDHWQTKLYLYVMAETTGYQPEQLVM
TYWFIAPGQAPQSLTFQYDQTWHQHIHTELVALLTQLQRDLEQYLQDGTPLHHGDRQICPHCPPHQHFSEVETLDFLAGK
SLEDFLGEIEAVQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29788; Mature: 29788

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYLSQAHLERFQRCPPAFQALYLEQLTAPNNPDYLENQQWGIRFHQAMQQLQLGLPPAQ
CCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
ITTDSNLHQSLQALLTAQPQLLDQQQQTAAEYRRTLMMGNFLLTIICDWINFGAETLQIY
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE
DWKTYRQPRQSDDLKDHWQTKLYLYVMAETTGYQPEQLVMTYWFIAPGQAPQSLTFQYDQ
CCHHHCCCCCCCCHHHHHCCEEEEEEEECCCCCCHHHHHHHHEEECCCCCCCCCEEHHHH
TWHQHIHTELVALLTQLQRDLEQYLQDGTPLHHGDRQICPHCPPHQHFSEVETLDFLAGK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
SLEDFLGEIEAVQL
CHHHHHHHHHHHCC
>Mature Secondary Structure
MFYLSQAHLERFQRCPPAFQALYLEQLTAPNNPDYLENQQWGIRFHQAMQQLQLGLPPAQ
CCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
ITTDSNLHQSLQALLTAQPQLLDQQQQTAAEYRRTLMMGNFLLTIICDWINFGAETLQIY
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE
DWKTYRQPRQSDDLKDHWQTKLYLYVMAETTGYQPEQLVMTYWFIAPGQAPQSLTFQYDQ
CCHHHCCCCCCCCHHHHHCCEEEEEEEECCCCCCHHHHHHHHEEECCCCCCCCCEEHHHH
TWHQHIHTELVALLTQLQRDLEQYLQDGTPLHHGDRQICPHCPPHQHFSEVETLDFLAGK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
SLEDFLGEIEAVQL
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA