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The map label for this gene is gatC

Identifier: 170078174

GI number: 170078174

Start: 1650648

End: 1650941

Strand: Reverse

Name: gatC

Synonym: SYNPCC7002_A1565

Alternate gene names: 170078174

Gene position: 1650941-1650648 (Counterclockwise)

Preceding gene: 170078175

Following gene: 170078172

Centisome position: 54.88

GC content: 46.94

Gene sequence:

>294_bases
ATGATTGATCTTGAACAGGTTCGCAAGGTTGCCCATTTAGCACGTTTGGAATTGACGCCGGAAGAGGAACAGCGTCTACC
CTCCCAACTCAGCGCGATTTTAGACTATGTCGAACAACTCAGTGAACTGGACACGGACAATGTAGAACCGACTACTAGGG
CGATTGATGTGAGTAATATCACCCGTACCGATGAGCAAAAAACCTTTGGCGATTGCCAACTTTTACTTGATAATGCCCCA
GACCGCGAAGATGATTATTTCCGAGTCCCCAAGATCCTTGGCGAAAGCGAATAA

Upstream 100 bases:

>100_bases
AACTGGCTGAAAACCACCGGTCGCTCGGAAATGGACGTCTTTTTCTAAATTAGTTAGTGATCGAAACTTTAAAGTAAGCA
TTCACATTGAGAATTTAAAC

Downstream 100 bases:

>100_bases
TTAAAATTTATGTTTTTGCTCAATTCCCCTGTCAGGTGATGGGGGAATTTTTATTGGGCATAATCAGTAGATTGCACCGC
TTCCTGCAGAACTTCGGTAA

Product: glutamyl-tRNA (Gln) amidotransferase chain C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MIDLEQVRKVAHLARLELTPEEEQRLPSQLSAILDYVEQLSELDTDNVEPTTRAIDVSNITRTDEQKTFGDCQLLLDNAP
DREDDYFRVPKILGESE

Sequences:

>Translated_97_residues
MIDLEQVRKVAHLARLELTPEEEQRLPSQLSAILDYVEQLSELDTDNVEPTTRAIDVSNITRTDEQKTFGDCQLLLDNAP
DREDDYFRVPKILGESE
>Mature_97_residues
MIDLEQVRKVAHLARLELTPEEEQRLPSQLSAILDYVEQLSELDTDNVEPTTRAIDVSNITRTDEQKTFGDCQLLLDNAP
DREDDYFRVPKILGESE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_SYNP2 (B1XNN1)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734812.1
- ProteinModelPortal:   B1XNN1
- SMR:   B1XNN1
- GeneID:   6055067
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1565
- HOGENOM:   HBG586403
- OMA:   KDVAYIA
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11144; Mature: 11144

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLEQVRKVAHLARLELTPEEEQRLPSQLSAILDYVEQLSELDTDNVEPTTRAIDVSNI
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCC
TRTDEQKTFGDCQLLLDNAPDREDDYFRVPKILGESE
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MIDLEQVRKVAHLARLELTPEEEQRLPSQLSAILDYVEQLSELDTDNVEPTTRAIDVSNI
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCC
TRTDEQKTFGDCQLLLDNAPDREDDYFRVPKILGESE
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA