| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is queF [H]
Identifier: 170078172
GI number: 170078172
Start: 1649365
End: 1649766
Strand: Reverse
Name: queF [H]
Synonym: SYNPCC7002_A1563
Alternate gene names: 170078172
Gene position: 1649766-1649365 (Counterclockwise)
Preceding gene: 170078174
Following gene: 170078171
Centisome position: 54.85
GC content: 48.26
Gene sequence:
>402_bases ATGGGCCAGACCACAGAAGCACAGTCCCTAAAGTACGGGGAGCGCGAAATTGAAAACGGTGAGCTGATTACCTTCCCGAA TCCCCGCCCCGGACGTCGCTATACCATTAACATCACCCTGCCGGAATACACTTGTAAATGTCCTTTTTCTGGCTATCCGG ACTTCGCAACGATTTACATTACCTATGTACCGGATCAGAAAGTGGTGGAGTTAAAAGCGATCAAGCTTTACATCAACAGT TACCGCGATCGCTATATTTCCCACGAAGAAGCAGTTAATCAAATTCTCGATGACCTGGTCGCGGCCTGTGATCCCCTCGA AATGACGATCAAAGGAGACTACCAGCCCCGTGGTAATGTGCATACTGTCATTGAAGTTACCCACACCAAAGAACAAGCAT GA
Upstream 100 bases:
>100_bases TGGCTAAGTGATTTCAAAGAAATTGCCTAGAGGCCCAAGACTTCAGCAAAGATTTGTACAATACAATACGGTTTCTTTAA AAAATATTAAGGTTTTATCC
Downstream 100 bases:
>100_bases TGATCTTCGCTTGGCAGTTCCAATCCCCTGGCCCCATTTTGTTTGAGGTGGGTAATTTTGCAATCCGTTGGTATGGTCTT TTAATCGCGATCGCCGTGTT
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MGQTTEAQSLKYGEREIENGELITFPNPRPGRRYTINITLPEYTCKCPFSGYPDFATIYITYVPDQKVVELKAIKLYINS YRDRYISHEEAVNQILDDLVAACDPLEMTIKGDYQPRGNVHTVIEVTHTKEQA
Sequences:
>Translated_133_residues MGQTTEAQSLKYGEREIENGELITFPNPRPGRRYTINITLPEYTCKCPFSGYPDFATIYITYVPDQKVVELKAIKLYINS YRDRYISHEEAVNQILDDLVAACDPLEMTIKGDYQPRGNVHTVIEVTHTKEQA >Mature_132_residues GQTTEAQSLKYGEREIENGELITFPNPRPGRRYTINITLPEYTCKCPFSGYPDFATIYITYVPDQKVVELKAIKLYINSY RDRYISHEEAVNQILDDLVAACDPLEMTIKGDYQPRGNVHTVIEVTHTKEQA
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016856 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 15262; Mature: 15131
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQTTEAQSLKYGEREIENGELITFPNPRPGRRYTINITLPEYTCKCPFSGYPDFATIYI CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEECCCCCCCCCEEEEE TYVPDQKVVELKAIKLYINSYRDRYISHEEAVNQILDDLVAACDPLEMTIKGDYQPRGNV EECCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCE HTVIEVTHTKEQA EEEEEEECCCCCC >Mature Secondary Structure GQTTEAQSLKYGEREIENGELITFPNPRPGRRYTINITLPEYTCKCPFSGYPDFATIYI CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCEEEECCCCCCCCCEEEEE TYVPDQKVVELKAIKLYINSYRDRYISHEEAVNQILDDLVAACDPLEMTIKGDYQPRGNV EECCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCE HTVIEVTHTKEQA EEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA