| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078039
Identifier: 170078039
GI number: 170078039
Start: 1501801
End: 1502295
Strand: Reverse
Name: 170078039
Synonym: SYNPCC7002_A1430
Alternate gene names: NA
Gene position: 1502295-1501801 (Counterclockwise)
Preceding gene: 170078040
Following gene: 170078037
Centisome position: 49.94
GC content: 53.74
Gene sequence:
>495_bases ATGGAGTTAAGTATCTCACTCCGAAATTGCGCCATGTCCTCCGCCCCATCCTGGAAAGTCAAATTGCTCTATGACGGTCA ATGTCCCCTTTGTCTGCGGGAGGTTAACTTTCTGCGGCGCAAGGATAATGGCCGTGGGTTAATTTGCTTTGTGGATGTGG CAGCCGATGATTACGACCCCAGTCGCCATGGTGGTGTGACTTTCCGGGCAGCGATGGAGCGGATCCATGGCGTACTACCC GACGGGACAGTGCTCCAAAATGTGGCGGTTTTTCGGTATGTTTACGAAGTCCTGGGGATGGGCTGGGTCTATGGCATCAC CAAACTTCCTGGCATTGGGCAACTGGCCGATTGGGTTTATGGCATCTGGGCGAAATATCGTCTGCAACTAACGGGCCGTC CCGATTTAATCACTCTGATCCAAAACCGGGAAGAACGACAAGCCTGTGGTGCTGGCGATCGCTGTCGTCTCGAAACGTCC GGAACGGACACCTAA
Upstream 100 bases:
>100_bases TGGTAATTGGAGAGTGAAAGACTGGGGCGATCGCCAAAAGAACACAGCCTTAAAAACGCCCTTTTGGTGATTCCCCAGGT ACTCGCAAAAAATCTTTACA
Downstream 100 bases:
>100_bases AATTTTTTTTTCTGAGAACGATCCGCCGAGGAAATGCTCAGTTTTTAACGTCAGACATCGTAGCTCATCAGCTGTTCGAC AGGTACGAAAACTTCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MELSISLRNCAMSSAPSWKVKLLYDGQCPLCLREVNFLRRKDNGRGLICFVDVAADDYDPSRHGGVTFRAAMERIHGVLP DGTVLQNVAVFRYVYEVLGMGWVYGITKLPGIGQLADWVYGIWAKYRLQLTGRPDLITLIQNREERQACGAGDRCRLETS GTDT
Sequences:
>Translated_164_residues MELSISLRNCAMSSAPSWKVKLLYDGQCPLCLREVNFLRRKDNGRGLICFVDVAADDYDPSRHGGVTFRAAMERIHGVLP DGTVLQNVAVFRYVYEVLGMGWVYGITKLPGIGQLADWVYGIWAKYRLQLTGRPDLITLIQNREERQACGAGDRCRLETS GTDT >Mature_164_residues MELSISLRNCAMSSAPSWKVKLLYDGQCPLCLREVNFLRRKDNGRGLICFVDVAADDYDPSRHGGVTFRAAMERIHGVLP DGTVLQNVAVFRYVYEVLGMGWVYGITKLPGIGQLADWVYGIWAKYRLQLTGRPDLITLIQNREERQACGAGDRCRLETS GTDT
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18388; Mature: 18388
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSISLRNCAMSSAPSWKVKLLYDGQCPLCLREVNFLRRKDNGRGLICFVDVAADDYDP CCEEEEHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCC SRHGGVTFRAAMERIHGVLPDGTVLQNVAVFRYVYEVLGMGWVYGITKLPGIGQLADWVY CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHH GIWAKYRLQLTGRPDLITLIQNREERQACGAGDRCRLETSGTDT HHHHEEEEEECCCCCEEEEECCCHHHHHCCCCCEEEEECCCCCC >Mature Secondary Structure MELSISLRNCAMSSAPSWKVKLLYDGQCPLCLREVNFLRRKDNGRGLICFVDVAADDYDP CCEEEEHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCC SRHGGVTFRAAMERIHGVLPDGTVLQNVAVFRYVYEVLGMGWVYGITKLPGIGQLADWVY CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHH GIWAKYRLQLTGRPDLITLIQNREERQACGAGDRCRLETSGTDT HHHHEEEEEECCCCCEEEEECCCHHHHHCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA