Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078040

Identifier: 170078040

GI number: 170078040

Start: 1502390

End: 1503730

Strand: Reverse

Name: 170078040

Synonym: SYNPCC7002_A1431

Alternate gene names: NA

Gene position: 1503730-1502390 (Counterclockwise)

Preceding gene: 170078041

Following gene: 170078039

Centisome position: 49.99

GC content: 50.78

Gene sequence:

>1341_bases
ATGTTTAAAACGATCCTGCAATATTTGCGCGGCTTGGCCATAACCTGTATTGGTTTACTACTACTGACCCAACCCGCCTG
GGCCTTCTGTGGTTTCTATGTCGCCAAGGCCGATACCGATCTCTATAACCAGGCATCCCAGGTGATTATTGCCCGGGATG
GCGATCGCACCGTACTAACCATGGCCAACGACTATGAAGGAGAAGTCTCAGATTTTGCCCTGGTGGTGCCTGTCCCAGTT
ATTCTCAAAGAAGAACAGGTTCACATTGGGGAAGCGAGTATCATCAAACGCCTGAATGACTTTAGCGCCCCCCGCCTCGT
GGAATATTTTGACGAAAATCCCTGTGCTGTAAGGAGATTTGATGATGGTTTTGGGCTCCTGCAAAATGCGGCGCCACCAA
TGCCCATGGCCGCAGAATCCATGCGCGAAACAGCAGCCGATCTCGGCGTCACCATCGAGGAACAATTTAGCGTCGGCGAA
TACGACATCCTCATTCTCAGTGCCAAAGAATCCGATGGCCTCGAAACTTGGTTACGCCAAAACGATTATCAACTACCCCA
GGGGGCCAGTGAGTTACTGCGGCCCTATATCCGCAACAAACTGAAATTCTTTGTGGCCAAGGTCAACCTCGAAGAATTTG
ACCGGAGCGGCGTAAACCAATTGCGTCCCCTGATGATGGCCTTCGAGTCACCGAAATATATGCTGCCGATTCGCTTGGGA
ATGATGAACGCCCAACAAGCCCAGGATCTGATTGTCTATATCCTTTCCCCCAAGGGCCAGGCGGAAGTAACTAACTATCG
CACCGTAAAAATTCCCTCGAATGTGGAAATTCCCGAATTTGTGGAAGCGGAGTTTGGCGATTTTTATACCACCATGTTTG
AGCAAGACTACCAACGCCAAGGCCGGGATGATATTTTCCTAGAATACGCCTGGGACATGAGCAGTTGTGATCCCTGTTCT
GCCCCCAATCTAACGAAAGCAGAGCTAAAACAGGCGGGGGTCTTTTGGGATGAAGATCAATATCTCCCCAGGGTGTTTAT
CACGAGGCTCCATGTGCGTTATGGCCGCGACAAGTTTCCGGAAGATCTCCGTTTCCAAGAAACGACCAATCGTCAGTTTT
TCCAAGGGCGCTATGTGATTCGTCATCCCTATCGGGGGGAAATGACCTGTAGTGCAGCCCAAGCCTATCGAGAACGTACC
TACCAACGCCAGGAAGCGGCGGTACAAACCCTGGCGAAGTTAACGGGTTGGGAGCCAGCAGACATTCGCCGCAAGGTTGA
CTTTATCGAAACCAATGGCCCAACGCCAACAGATGAGGCTTGGTGGGATTCTATTTGGTAA

Upstream 100 bases:

>100_bases
GATCGCCCCGGTTCCAGTGGCAAGAAAAAGCTCAGGTGAAAGCCCCTATTGGCGATTCTTCTTTGACCCTACAAACTCGC
CCCGTTATCTAAGGAAAATC

Downstream 100 bases:

>100_bases
TTGGAGAGTGAAAGACTGGGGCGATCGCCAAAAGAACACAGCCTTAAAAACGCCCTTTTGGTGATTCCCCAGGTACTCGC
AAAAAATCTTTACAATGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MFKTILQYLRGLAITCIGLLLLTQPAWAFCGFYVAKADTDLYNQASQVIIARDGDRTVLTMANDYEGEVSDFALVVPVPV
ILKEEQVHIGEASIIKRLNDFSAPRLVEYFDENPCAVRRFDDGFGLLQNAAPPMPMAAESMRETAADLGVTIEEQFSVGE
YDILILSAKESDGLETWLRQNDYQLPQGASELLRPYIRNKLKFFVAKVNLEEFDRSGVNQLRPLMMAFESPKYMLPIRLG
MMNAQQAQDLIVYILSPKGQAEVTNYRTVKIPSNVEIPEFVEAEFGDFYTTMFEQDYQRQGRDDIFLEYAWDMSSCDPCS
APNLTKAELKQAGVFWDEDQYLPRVFITRLHVRYGRDKFPEDLRFQETTNRQFFQGRYVIRHPYRGEMTCSAAQAYRERT
YQRQEAAVQTLAKLTGWEPADIRRKVDFIETNGPTPTDEAWWDSIW

Sequences:

>Translated_446_residues
MFKTILQYLRGLAITCIGLLLLTQPAWAFCGFYVAKADTDLYNQASQVIIARDGDRTVLTMANDYEGEVSDFALVVPVPV
ILKEEQVHIGEASIIKRLNDFSAPRLVEYFDENPCAVRRFDDGFGLLQNAAPPMPMAAESMRETAADLGVTIEEQFSVGE
YDILILSAKESDGLETWLRQNDYQLPQGASELLRPYIRNKLKFFVAKVNLEEFDRSGVNQLRPLMMAFESPKYMLPIRLG
MMNAQQAQDLIVYILSPKGQAEVTNYRTVKIPSNVEIPEFVEAEFGDFYTTMFEQDYQRQGRDDIFLEYAWDMSSCDPCS
APNLTKAELKQAGVFWDEDQYLPRVFITRLHVRYGRDKFPEDLRFQETTNRQFFQGRYVIRHPYRGEMTCSAAQAYRERT
YQRQEAAVQTLAKLTGWEPADIRRKVDFIETNGPTPTDEAWWDSIW
>Mature_446_residues
MFKTILQYLRGLAITCIGLLLLTQPAWAFCGFYVAKADTDLYNQASQVIIARDGDRTVLTMANDYEGEVSDFALVVPVPV
ILKEEQVHIGEASIIKRLNDFSAPRLVEYFDENPCAVRRFDDGFGLLQNAAPPMPMAAESMRETAADLGVTIEEQFSVGE
YDILILSAKESDGLETWLRQNDYQLPQGASELLRPYIRNKLKFFVAKVNLEEFDRSGVNQLRPLMMAFESPKYMLPIRLG
MMNAQQAQDLIVYILSPKGQAEVTNYRTVKIPSNVEIPEFVEAEFGDFYTTMFEQDYQRQGRDDIFLEYAWDMSSCDPCS
APNLTKAELKQAGVFWDEDQYLPRVFITRLHVRYGRDKFPEDLRFQETTNRQFFQGRYVIRHPYRGEMTCSAAQAYRERT
YQRQEAAVQTLAKLTGWEPADIRRKVDFIETNGPTPTDEAWWDSIW

Specific function: Unknown

COG id: COG4402

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51366; Mature: 51366

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTILQYLRGLAITCIGLLLLTQPAWAFCGFYVAKADTDLYNQASQVIIARDGDRTVLT
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCEEEE
MANDYEGEVSDFALVVPVPVILKEEQVHIGEASIIKRLNDFSAPRLVEYFDENPCAVRRF
EECCCCCCHHCEEEEECCCEEEECCCEECCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEE
DDGFGLLQNAAPPMPMAAESMRETAADLGVTIEEQFSVGEYDILILSAKESDGLETWLRQ
CCCHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCCCCCHHHHHHC
NDYQLPQGASELLRPYIRNKLKFFVAKVNLEEFDRSGVNQLRPLMMAFESPKYMLPIRLG
CCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEC
MMNAQQAQDLIVYILSPKGQAEVTNYRTVKIPSNVEIPEFVEAEFGDFYTTMFEQDYQRQ
CCCHHCCCCEEEEEECCCCCCEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GRDDIFLEYAWDMSSCDPCSAPNLTKAELKQAGVFWDEDQYLPRVFITRLHVRYGRDKFP
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
EDLRFQETTNRQFFQGRYVIRHPYRGEMTCSAAQAYRERTYQRQEAAVQTLAKLTGWEPA
CCCCCHHCCCCHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DIRRKVDFIETNGPTPTDEAWWDSIW
HHHHHHHEEECCCCCCCCCCHHCCCC
>Mature Secondary Structure
MFKTILQYLRGLAITCIGLLLLTQPAWAFCGFYVAKADTDLYNQASQVIIARDGDRTVLT
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCEEEE
MANDYEGEVSDFALVVPVPVILKEEQVHIGEASIIKRLNDFSAPRLVEYFDENPCAVRRF
EECCCCCCHHCEEEEECCCEEEECCCEECCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEE
DDGFGLLQNAAPPMPMAAESMRETAADLGVTIEEQFSVGEYDILILSAKESDGLETWLRQ
CCCHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCCCCCHHHHHHC
NDYQLPQGASELLRPYIRNKLKFFVAKVNLEEFDRSGVNQLRPLMMAFESPKYMLPIRLG
CCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEC
MMNAQQAQDLIVYILSPKGQAEVTNYRTVKIPSNVEIPEFVEAEFGDFYTTMFEQDYQRQ
CCCHHCCCCEEEEEECCCCCCEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
GRDDIFLEYAWDMSSCDPCSAPNLTKAELKQAGVFWDEDQYLPRVFITRLHVRYGRDKFP
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
EDLRFQETTNRQFFQGRYVIRHPYRGEMTCSAAQAYRERTYQRQEAAVQTLAKLTGWEPA
CCCCCHHCCCCHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DIRRKVDFIETNGPTPTDEAWWDSIW
HHHHHHHEEECCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA