| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078040
Identifier: 170078040
GI number: 170078040
Start: 1502390
End: 1503730
Strand: Reverse
Name: 170078040
Synonym: SYNPCC7002_A1431
Alternate gene names: NA
Gene position: 1503730-1502390 (Counterclockwise)
Preceding gene: 170078041
Following gene: 170078039
Centisome position: 49.99
GC content: 50.78
Gene sequence:
>1341_bases ATGTTTAAAACGATCCTGCAATATTTGCGCGGCTTGGCCATAACCTGTATTGGTTTACTACTACTGACCCAACCCGCCTG GGCCTTCTGTGGTTTCTATGTCGCCAAGGCCGATACCGATCTCTATAACCAGGCATCCCAGGTGATTATTGCCCGGGATG GCGATCGCACCGTACTAACCATGGCCAACGACTATGAAGGAGAAGTCTCAGATTTTGCCCTGGTGGTGCCTGTCCCAGTT ATTCTCAAAGAAGAACAGGTTCACATTGGGGAAGCGAGTATCATCAAACGCCTGAATGACTTTAGCGCCCCCCGCCTCGT GGAATATTTTGACGAAAATCCCTGTGCTGTAAGGAGATTTGATGATGGTTTTGGGCTCCTGCAAAATGCGGCGCCACCAA TGCCCATGGCCGCAGAATCCATGCGCGAAACAGCAGCCGATCTCGGCGTCACCATCGAGGAACAATTTAGCGTCGGCGAA TACGACATCCTCATTCTCAGTGCCAAAGAATCCGATGGCCTCGAAACTTGGTTACGCCAAAACGATTATCAACTACCCCA GGGGGCCAGTGAGTTACTGCGGCCCTATATCCGCAACAAACTGAAATTCTTTGTGGCCAAGGTCAACCTCGAAGAATTTG ACCGGAGCGGCGTAAACCAATTGCGTCCCCTGATGATGGCCTTCGAGTCACCGAAATATATGCTGCCGATTCGCTTGGGA ATGATGAACGCCCAACAAGCCCAGGATCTGATTGTCTATATCCTTTCCCCCAAGGGCCAGGCGGAAGTAACTAACTATCG CACCGTAAAAATTCCCTCGAATGTGGAAATTCCCGAATTTGTGGAAGCGGAGTTTGGCGATTTTTATACCACCATGTTTG AGCAAGACTACCAACGCCAAGGCCGGGATGATATTTTCCTAGAATACGCCTGGGACATGAGCAGTTGTGATCCCTGTTCT GCCCCCAATCTAACGAAAGCAGAGCTAAAACAGGCGGGGGTCTTTTGGGATGAAGATCAATATCTCCCCAGGGTGTTTAT CACGAGGCTCCATGTGCGTTATGGCCGCGACAAGTTTCCGGAAGATCTCCGTTTCCAAGAAACGACCAATCGTCAGTTTT TCCAAGGGCGCTATGTGATTCGTCATCCCTATCGGGGGGAAATGACCTGTAGTGCAGCCCAAGCCTATCGAGAACGTACC TACCAACGCCAGGAAGCGGCGGTACAAACCCTGGCGAAGTTAACGGGTTGGGAGCCAGCAGACATTCGCCGCAAGGTTGA CTTTATCGAAACCAATGGCCCAACGCCAACAGATGAGGCTTGGTGGGATTCTATTTGGTAA
Upstream 100 bases:
>100_bases GATCGCCCCGGTTCCAGTGGCAAGAAAAAGCTCAGGTGAAAGCCCCTATTGGCGATTCTTCTTTGACCCTACAAACTCGC CCCGTTATCTAAGGAAAATC
Downstream 100 bases:
>100_bases TTGGAGAGTGAAAGACTGGGGCGATCGCCAAAAGAACACAGCCTTAAAAACGCCCTTTTGGTGATTCCCCAGGTACTCGC AAAAAATCTTTACAATGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MFKTILQYLRGLAITCIGLLLLTQPAWAFCGFYVAKADTDLYNQASQVIIARDGDRTVLTMANDYEGEVSDFALVVPVPV ILKEEQVHIGEASIIKRLNDFSAPRLVEYFDENPCAVRRFDDGFGLLQNAAPPMPMAAESMRETAADLGVTIEEQFSVGE YDILILSAKESDGLETWLRQNDYQLPQGASELLRPYIRNKLKFFVAKVNLEEFDRSGVNQLRPLMMAFESPKYMLPIRLG MMNAQQAQDLIVYILSPKGQAEVTNYRTVKIPSNVEIPEFVEAEFGDFYTTMFEQDYQRQGRDDIFLEYAWDMSSCDPCS APNLTKAELKQAGVFWDEDQYLPRVFITRLHVRYGRDKFPEDLRFQETTNRQFFQGRYVIRHPYRGEMTCSAAQAYRERT YQRQEAAVQTLAKLTGWEPADIRRKVDFIETNGPTPTDEAWWDSIW
Sequences:
>Translated_446_residues MFKTILQYLRGLAITCIGLLLLTQPAWAFCGFYVAKADTDLYNQASQVIIARDGDRTVLTMANDYEGEVSDFALVVPVPV ILKEEQVHIGEASIIKRLNDFSAPRLVEYFDENPCAVRRFDDGFGLLQNAAPPMPMAAESMRETAADLGVTIEEQFSVGE YDILILSAKESDGLETWLRQNDYQLPQGASELLRPYIRNKLKFFVAKVNLEEFDRSGVNQLRPLMMAFESPKYMLPIRLG MMNAQQAQDLIVYILSPKGQAEVTNYRTVKIPSNVEIPEFVEAEFGDFYTTMFEQDYQRQGRDDIFLEYAWDMSSCDPCS APNLTKAELKQAGVFWDEDQYLPRVFITRLHVRYGRDKFPEDLRFQETTNRQFFQGRYVIRHPYRGEMTCSAAQAYRERT YQRQEAAVQTLAKLTGWEPADIRRKVDFIETNGPTPTDEAWWDSIW >Mature_446_residues MFKTILQYLRGLAITCIGLLLLTQPAWAFCGFYVAKADTDLYNQASQVIIARDGDRTVLTMANDYEGEVSDFALVVPVPV ILKEEQVHIGEASIIKRLNDFSAPRLVEYFDENPCAVRRFDDGFGLLQNAAPPMPMAAESMRETAADLGVTIEEQFSVGE YDILILSAKESDGLETWLRQNDYQLPQGASELLRPYIRNKLKFFVAKVNLEEFDRSGVNQLRPLMMAFESPKYMLPIRLG MMNAQQAQDLIVYILSPKGQAEVTNYRTVKIPSNVEIPEFVEAEFGDFYTTMFEQDYQRQGRDDIFLEYAWDMSSCDPCS APNLTKAELKQAGVFWDEDQYLPRVFITRLHVRYGRDKFPEDLRFQETTNRQFFQGRYVIRHPYRGEMTCSAAQAYRERT YQRQEAAVQTLAKLTGWEPADIRRKVDFIETNGPTPTDEAWWDSIW
Specific function: Unknown
COG id: COG4402
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51366; Mature: 51366
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKTILQYLRGLAITCIGLLLLTQPAWAFCGFYVAKADTDLYNQASQVIIARDGDRTVLT CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCEEEE MANDYEGEVSDFALVVPVPVILKEEQVHIGEASIIKRLNDFSAPRLVEYFDENPCAVRRF EECCCCCCHHCEEEEECCCEEEECCCEECCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEE DDGFGLLQNAAPPMPMAAESMRETAADLGVTIEEQFSVGEYDILILSAKESDGLETWLRQ CCCHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCCCCCHHHHHHC NDYQLPQGASELLRPYIRNKLKFFVAKVNLEEFDRSGVNQLRPLMMAFESPKYMLPIRLG CCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEC MMNAQQAQDLIVYILSPKGQAEVTNYRTVKIPSNVEIPEFVEAEFGDFYTTMFEQDYQRQ CCCHHCCCCEEEEEECCCCCCEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GRDDIFLEYAWDMSSCDPCSAPNLTKAELKQAGVFWDEDQYLPRVFITRLHVRYGRDKFP CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC EDLRFQETTNRQFFQGRYVIRHPYRGEMTCSAAQAYRERTYQRQEAAVQTLAKLTGWEPA CCCCCHHCCCCHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH DIRRKVDFIETNGPTPTDEAWWDSIW HHHHHHHEEECCCCCCCCCCHHCCCC >Mature Secondary Structure MFKTILQYLRGLAITCIGLLLLTQPAWAFCGFYVAKADTDLYNQASQVIIARDGDRTVLT CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCEEEE MANDYEGEVSDFALVVPVPVILKEEQVHIGEASIIKRLNDFSAPRLVEYFDENPCAVRRF EECCCCCCHHCEEEEECCCEEEECCCEECCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEE DDGFGLLQNAAPPMPMAAESMRETAADLGVTIEEQFSVGEYDILILSAKESDGLETWLRQ CCCHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCCCCCHHHHHHC NDYQLPQGASELLRPYIRNKLKFFVAKVNLEEFDRSGVNQLRPLMMAFESPKYMLPIRLG CCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEC MMNAQQAQDLIVYILSPKGQAEVTNYRTVKIPSNVEIPEFVEAEFGDFYTTMFEQDYQRQ CCCHHCCCCEEEEEECCCCCCEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC GRDDIFLEYAWDMSSCDPCSAPNLTKAELKQAGVFWDEDQYLPRVFITRLHVRYGRDKFP CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC EDLRFQETTNRQFFQGRYVIRHPYRGEMTCSAAQAYRERTYQRQEAAVQTLAKLTGWEPA CCCCCHHCCCCHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH DIRRKVDFIETNGPTPTDEAWWDSIW HHHHHHHEEECCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA