| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078037
Identifier: 170078037
GI number: 170078037
Start: 1501158
End: 1501370
Strand: Reverse
Name: 170078037
Synonym: SYNPCC7002_A1428
Alternate gene names: NA
Gene position: 1501370-1501158 (Counterclockwise)
Preceding gene: 170078039
Following gene: 170078036
Centisome position: 49.91
GC content: 52.11
Gene sequence:
>213_bases ATGACAGTCTTAACAAAAACCCCCCAGGAAATCGCCCACATGGACGAAACGGATGTGGCTCAACTCGCCGCACGATTAGA ACAGGACGATTATGGAACTCCCTTTGAAGCCCTCCAGGATTGGCACTTGTTGCGGGCGATCGCCTTTCAACGGCAAGAGT TAGTCGAACCCTACTGGCACCTCTTGGACATCGAAGCCTACGACGAATCGTAA
Upstream 100 bases:
>100_bases AATAAGAACGGTGACAGGCCATTGTTTTGGGAATTTCTAAGAGTAGAATAAAGAATGAACAGAACCTAAAAGAACGTGCA GCGTCAGGGAGGTCTTATTT
Downstream 100 bases:
>100_bases ATGCTCAACGAAAAAAAGATTGTCGTCGGCATTAGTGGGGGCATTGCCGCCTACAAAGTTTGTGAAGTCATTTCCCAACT GTTCCAGGCTGGGGCAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MTVLTKTPQEIAHMDETDVAQLAARLEQDDYGTPFEALQDWHLLRAIAFQRQELVEPYWHLLDIEAYDES
Sequences:
>Translated_70_residues MTVLTKTPQEIAHMDETDVAQLAARLEQDDYGTPFEALQDWHLLRAIAFQRQELVEPYWHLLDIEAYDES >Mature_69_residues TVLTKTPQEIAHMDETDVAQLAARLEQDDYGTPFEALQDWHLLRAIAFQRQELVEPYWHLLDIEAYDES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019678 [H]
Pfam domain/function: PF10742 DUF2555 [H]
EC number: NA
Molecular weight: Translated: 8217; Mature: 8086
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLTKTPQEIAHMDETDVAQLAARLEQDDYGTPFEALQDWHLLRAIAFQRQELVEPYWH CCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLDIEAYDES HHHHHCCCCC >Mature Secondary Structure TVLTKTPQEIAHMDETDVAQLAARLEQDDYGTPFEALQDWHLLRAIAFQRQELVEPYWH CCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLDIEAYDES HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]