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The map label for this gene is arnC [H]

Identifier: 170078032

GI number: 170078032

Start: 1495372

End: 1496244

Strand: Reverse

Name: arnC [H]

Synonym: SYNPCC7002_A1423

Alternate gene names: 170078032

Gene position: 1496244-1495372 (Counterclockwise)

Preceding gene: 170078035

Following gene: 170078026

Centisome position: 49.74

GC content: 37.11

Gene sequence:

>873_bases
ATGCCACAATCTCCGTCTCCAGGGGTTTCGATTATTATCCCTGTCTATAATGAAGAAGGGGCGATCGCCGAAACATTGGA
GCAATTAAAGACAATTTTTTCCCAAGTAGAACAAGTCTACGAAATTATTGTGGTTGATGATGGTTCCATTGACAATACTG
CAAAAATTTTAGAAGAGCAACCGGGAATTCGTCTTTTAAAACATCCGATAAATCGAGGCTATGGTGCAGCCCTTAAAACA
GGCATTATCCATGCTCAATATGATTTGATTGCAATCACTGATGCTGATGGGACTTATCCGAATGAGCGATTGCTAGATCT
GATCAGTTTAGGAATGAGCGGTAGGTTTGATATGGTGGTTGGCTCTCGCACAGGGAAAAATGTTACTTACTCTAACATCC
GCAAGATTCCAAAATTCTTTTTAGTTGGTTTTGCTGAGTGGATCGCCAAACAAAAGATTCCAGATCTTAATAGTGGCATG
CGAGTCTTTCGTAAAGAAATTGCTCAGGAATTCATTCATATTTTACCTGATACTTTTAGTTTTACAACAACTATTACATT
AGCAATGCTGACCAATAATTATATTGTTCACTATGAACCAATAAACTACTTTCATCGAGTTGGAAAAAGCAAAATAAAGC
CCGTTCAAGACACGCTGCGTTTTTTTAAATTAATTCTAAGAACAGGAATTTATTTTGCGCCAATTAGAATATTTGTGCCG
ATTGCTAGTCTTTTTTTTCTGGGTTTTTTAATCTCCCTTGCTCAGGATATACTTAGAAAAGACTTGACAGAATCTACTTT
GATTCTCTTTGTTGCAGCAACTCAACTTGCGGTTTTTTCTTTACTGGCAGACATGTTAGATAAGCGCTTATAA

Upstream 100 bases:

>100_bases
AATTGACTGACTCGATCTAACAGGTTTAAACTCATTTATAATTAGCAAAATAAACAATTAACTTTAGACTTATTCTGTGA
TGGCAGTAGTACCTGAGCCC

Downstream 100 bases:

>100_bases
AATAAGTTTATGACTTTAACGCTGTTCGGAGACTGCCTTGATGGACTTTTAATAAATGCTCTGCTTCTGAGGCGTCTACA
TTTTTCCAATGCATTAATAA

Product: glycosyl transferase group 2 family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPQSPSPGVSIIIPVYNEEGAIAETLEQLKTIFSQVEQVYEIIVVDDGSIDNTAKILEEQPGIRLLKHPINRGYGAALKT
GIIHAQYDLIAITDADGTYPNERLLDLISLGMSGRFDMVVGSRTGKNVTYSNIRKIPKFFLVGFAEWIAKQKIPDLNSGM
RVFRKEIAQEFIHILPDTFSFTTTITLAMLTNNYIVHYEPINYFHRVGKSKIKPVQDTLRFFKLILRTGIYFAPIRIFVP
IASLFFLGFLISLAQDILRKDLTESTLILFVAATQLAVFSLLADMLDKRL

Sequences:

>Translated_290_residues
MPQSPSPGVSIIIPVYNEEGAIAETLEQLKTIFSQVEQVYEIIVVDDGSIDNTAKILEEQPGIRLLKHPINRGYGAALKT
GIIHAQYDLIAITDADGTYPNERLLDLISLGMSGRFDMVVGSRTGKNVTYSNIRKIPKFFLVGFAEWIAKQKIPDLNSGM
RVFRKEIAQEFIHILPDTFSFTTTITLAMLTNNYIVHYEPINYFHRVGKSKIKPVQDTLRFFKLILRTGIYFAPIRIFVP
IASLFFLGFLISLAQDILRKDLTESTLILFVAATQLAVFSLLADMLDKRL
>Mature_289_residues
PQSPSPGVSIIIPVYNEEGAIAETLEQLKTIFSQVEQVYEIIVVDDGSIDNTAKILEEQPGIRLLKHPINRGYGAALKTG
IIHAQYDLIAITDADGTYPNERLLDLISLGMSGRFDMVVGSRTGKNVTYSNIRKIPKFFLVGFAEWIAKQKIPDLNSGMR
VFRKEIAQEFIHILPDTFSFTTTITLAMLTNNYIVHYEPINYFHRVGKSKIKPVQDTLRFFKLILRTGIYFAPIRIFVPI
ASLFFLGFLISLAQDILRKDLTESTLILFVAATQLAVFSLLADMLDKRL

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=214, Percent_Identity=28.9719626168224, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1788588, Length=175, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25146207, Length=246, Percent_Identity=28.0487804878049, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71999402, Length=224, Percent_Identity=25, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6325029, Length=255, Percent_Identity=28.2352941176471, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24585265, Length=214, Percent_Identity=27.1028037383178, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 32689; Mature: 32558

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSPSPGVSIIIPVYNEEGAIAETLEQLKTIFSQVEQVYEIIVVDDGSIDNTAKILEEQ
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCC
PGIRLLKHPINRGYGAALKTGIIHAQYDLIAITDADGTYPNERLLDLISLGMSGRFDMVV
CCHHHHHHHHCCCCCHHHHHCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEE
GSRTGKNVTYSNIRKIPKFFLVGFAEWIAKQKIPDLNSGMRVFRKEIAQEFIHILPDTFS
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
FTTTITLAMLTNNYIVHYEPINYFHRVGKSKIKPVQDTLRFFKLILRTGIYFAPIRIFVP
HHHHHHHEEECCCEEEEECCHHHHHHHCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
IASLFFLGFLISLAQDILRKDLTESTLILFVAATQLAVFSLLADMLDKRL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PQSPSPGVSIIIPVYNEEGAIAETLEQLKTIFSQVEQVYEIIVVDDGSIDNTAKILEEQ
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCC
PGIRLLKHPINRGYGAALKTGIIHAQYDLIAITDADGTYPNERLLDLISLGMSGRFDMVV
CCHHHHHHHHCCCCCHHHHHCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEE
GSRTGKNVTYSNIRKIPKFFLVGFAEWIAKQKIPDLNSGMRVFRKEIAQEFIHILPDTFS
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
FTTTITLAMLTNNYIVHYEPINYFHRVGKSKIKPVQDTLRFFKLILRTGIYFAPIRIFVP
HHHHHHHEEECCCEEEEECCHHHHHHHCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
IASLFFLGFLISLAQDILRKDLTESTLILFVAATQLAVFSLLADMLDKRL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA