Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078035

Identifier: 170078035

GI number: 170078035

Start: 1499614

End: 1499925

Strand: Reverse

Name: 170078035

Synonym: SYNPCC7002_A1426

Alternate gene names: NA

Gene position: 1499925-1499614 (Counterclockwise)

Preceding gene: 170078036

Following gene: 170078032

Centisome position: 49.86

GC content: 55.13

Gene sequence:

>312_bases
ATGAACGCCCTTTCCTTTCCCACTTGGATTGTCCACATCTCTAGCGTTTTGGAGTGGATTTTGGCTATTTGGCTGATCCA
AACCTACGGCAATCTGACCCAAGACAAAAGCTGGTCGGCCCTCGCCTGGGGAATGTTGCCGTCCCTCGTTAGCGCGATGT
GTGCCTGCACTTGGCACTTTTTCGACAATGCACCCAGCCTCGAATGGCTCGTCACGATCCAAGCCGCCCTCACTCTCCTG
GGTAACTGCACCCTGTGTTTAGGGGCCTGGTGGATTTGGCGATCGCCTGACCCCAAAGAATCGGTCGACTAG

Upstream 100 bases:

>100_bases
AAGGCCGCAAGGCGACAATTCCCCAGGCCAGCAAGGGGGCGATCGCCCATCATCTACTAGACTTTATCAAGCAACTTTAA
ACAAAATTTCTGCCCCTGCG

Downstream 100 bases:

>100_bases
AAATTCACAAACACTTCCGGCGTCCAACTACCATGCAGGCCATAGGGAATATGCTGCTTTAAATGTAGGGTTGCCAAAGG
TTGAGCAAAATTTTGCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MNALSFPTWIVHISSVLEWILAIWLIQTYGNLTQDKSWSALAWGMLPSLVSAMCACTWHFFDNAPSLEWLVTIQAALTLL
GNCTLCLGAWWIWRSPDPKESVD

Sequences:

>Translated_103_residues
MNALSFPTWIVHISSVLEWILAIWLIQTYGNLTQDKSWSALAWGMLPSLVSAMCACTWHFFDNAPSLEWLVTIQAALTLL
GNCTLCLGAWWIWRSPDPKESVD
>Mature_103_residues
MNALSFPTWIVHISSVLEWILAIWLIQTYGNLTQDKSWSALAWGMLPSLVSAMCACTWHFFDNAPSLEWLVTIQAALTLL
GNCTLCLGAWWIWRSPDPKESVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf49 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019634 [H]

Pfam domain/function: PF10693 DUF2499 [H]

EC number: NA

Molecular weight: Translated: 11655; Mature: 11655

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALSFPTWIVHISSVLEWILAIWLIQTYGNLTQDKSWSALAWGMLPSLVSAMCACTWHF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FDNAPSLEWLVTIQAALTLLGNCTLCLGAWWIWRSPDPKESVD
HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNALSFPTWIVHISSVLEWILAIWLIQTYGNLTQDKSWSALAWGMLPSLVSAMCACTWHF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FDNAPSLEWLVTIQAALTLLGNCTLCLGAWWIWRSPDPKESVD
HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]