| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077974
Identifier: 170077974
GI number: 170077974
Start: 1420100
End: 1420588
Strand: Reverse
Name: 170077974
Synonym: SYNPCC7002_A1360
Alternate gene names: NA
Gene position: 1420588-1420100 (Counterclockwise)
Preceding gene: 170077975
Following gene: 170077971
Centisome position: 47.23
GC content: 50.92
Gene sequence:
>489_bases ATGTTACCGAATAAATTTCGATTTGTGCATCAGTCCAAACCTATGATCAAAGAACGCCTTACTACCTGCGAAACTCTCCT CTACCGTTGGCTCCATTTCCACCAAAACCAAACGAAGCCAGAGGAGCTGAATTTACAGTATTTTCAAGTCTGGACCGCAG AATTTCTTGCGGAAAAGGCCAGTGGCGAGGATATTGATCAAGCTCTGCTGCGGTTGATGCAATTGCGCCTGATTTATCTC AACGATGGCGGAACATTGGCGATCGCCCCAGAAGAGCAACCGGGCGTACAAATGGCTCCCCTCCCCCGGAAATTTTGGCA AGCGTGGTCTTGGGAGCACCATTTGGCGGCGGGCAGTTTGGCGATCGCCTCGGTGGTTTTGATGGCCGTCTCTGCCTTTG CCCTGTGGCAAAACACCGATGCGCCCTTGGACATGACAGAATCAGCAACCGTTACGGAACAGGTGCTTGGAGAAAATGAC CCAGAATAA
Upstream 100 bases:
>100_bases GTATTGTCTCGGATTCATTACATTTCGCGGCACAAAACGTCAATAAACGTGAATTAGGTTCCCCAAAGGGAGCTTTTTTT TTCTAGAATATTTGTAGCGA
Downstream 100 bases:
>100_bases CGGCACTAGGGCAAGCACAAACTGGTGCAATCCATTAGCGGCGAAGGGAACGGGGGTTGAGATATTTTGCGGCGATCGCC CCGCCGATAAGTCCGAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLPNKFRFVHQSKPMIKERLTTCETLLYRWLHFHQNQTKPEELNLQYFQVWTAEFLAEKASGEDIDQALLRLMQLRLIYL NDGGTLAIAPEEQPGVQMAPLPRKFWQAWSWEHHLAAGSLAIASVVLMAVSAFALWQNTDAPLDMTESATVTEQVLGEND PE
Sequences:
>Translated_162_residues MLPNKFRFVHQSKPMIKERLTTCETLLYRWLHFHQNQTKPEELNLQYFQVWTAEFLAEKASGEDIDQALLRLMQLRLIYL NDGGTLAIAPEEQPGVQMAPLPRKFWQAWSWEHHLAAGSLAIASVVLMAVSAFALWQNTDAPLDMTESATVTEQVLGEND PE >Mature_162_residues MLPNKFRFVHQSKPMIKERLTTCETLLYRWLHFHQNQTKPEELNLQYFQVWTAEFLAEKASGEDIDQALLRLMQLRLIYL NDGGTLAIAPEEQPGVQMAPLPRKFWQAWSWEHHLAAGSLAIASVVLMAVSAFALWQNTDAPLDMTESATVTEQVLGEND PE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18551; Mature: 18551
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPNKFRFVHQSKPMIKERLTTCETLLYRWLHFHQNQTKPEELNLQYFQVWTAEFLAEKA CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHC SGEDIDQALLRLMQLRLIYLNDGGTLAIAPEEQPGVQMAPLPRKFWQAWSWEHHLAAGSL CCCCHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHH AIASVVLMAVSAFALWQNTDAPLDMTESATVTEQVLGENDPE HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MLPNKFRFVHQSKPMIKERLTTCETLLYRWLHFHQNQTKPEELNLQYFQVWTAEFLAEKA CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHC SGEDIDQALLRLMQLRLIYLNDGGTLAIAPEEQPGVQMAPLPRKFWQAWSWEHHLAAGSL CCCCHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHH AIASVVLMAVSAFALWQNTDAPLDMTESATVTEQVLGENDPE HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA