| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077971
Identifier: 170077971
GI number: 170077971
Start: 1418086
End: 1418604
Strand: Reverse
Name: 170077971
Synonym: SYNPCC7002_A1357
Alternate gene names: NA
Gene position: 1418604-1418086 (Counterclockwise)
Preceding gene: 170077974
Following gene: 170077970
Centisome position: 47.16
GC content: 40.27
Gene sequence:
>519_bases ATGAACTTTTATCAGCGTCGCCTGTCTATTTTTGTAGATGGGAATAATATGTTTTATGCACAACAGAAAAATAATTGGTT TTTTGACCCCCGTCGTGTTTTAGATTATTTTACTTGCGATCCCACCGTGCGCCTGATTAATGCCTTTTGGTACACAGGCC TAAAGGATTCCCAAGATCAGCGGGGTTTCCGCGATGCCTTGATTAGTCTGGGTTATACAGTACGCACAAAAATCCTCAAA GAATACTATGACGATGTCTCCGGTCGCTACTCCCAGAAAGCAAATTTAGACATTGAAATTGTGGTCGATATGTTTAATAC AGTCGATCAATATGATCAAGTTATTTTGTTTAGTGGCGATGGTGATTTTGAACGGGCCATTGAACTTTTACGCTCAAAAA ATACCCACATTACCGTTGTTTCGACAGAAGGAATGATCGCCCGGGAACTGAGAAATGCCACGGATTGTTACATTGATCTA AATAATCTGCGGGCCGAAATTGAAAAAACAGAACCTTAA
Upstream 100 bases:
>100_bases TATTTTTATTGCGAGGGAACAACTTCTTCCCTTTATTTAAACCCAAACTAAAACCCTATATTTAAAAAAATCACCCTATT ATTTTAGGGCCAATTTTGCT
Downstream 100 bases:
>100_bases GCAATCACAGTAGCCATAAATGCTTTAAAAATGCCTTGAATGACGCCACTATTTTTGACTGAATTAAGGCCAAAGATTTA GTGTTGTGTTCCAATAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNFYQRRLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGLKDSQDQRGFRDALISLGYTVRTKILK EYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVILFSGDGDFERAIELLRSKNTHITVVSTEGMIARELRNATDCYIDL NNLRAEIEKTEP
Sequences:
>Translated_172_residues MNFYQRRLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGLKDSQDQRGFRDALISLGYTVRTKILK EYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVILFSGDGDFERAIELLRSKNTHITVVSTEGMIARELRNATDCYIDL NNLRAEIEKTEP >Mature_172_residues MNFYQRRLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGLKDSQDQRGFRDALISLGYTVRTKILK EYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVILFSGDGDFERAIELLRSKNTHITVVSTEGMIARELRNATDCYIDL NNLRAEIEKTEP
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20264; Mature: 20264
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFYQRRLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGLKDSQDQ CCHHHEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVILFSGD HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCEEEEECCC GDFERAIELLRSKNTHITVVSTEGMIARELRNATDCYIDLNNLRAEIEKTEP CCHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCEEEEEHHHHHEECCCCCC >Mature Secondary Structure MNFYQRRLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGLKDSQDQ CCHHHEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVILFSGD HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCEEEEECCC GDFERAIELLRSKNTHITVVSTEGMIARELRNATDCYIDLNNLRAEIEKTEP CCHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCEEEEEHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA