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The map label for this gene is 170077963

Identifier: 170077963

GI number: 170077963

Start: 1403966

End: 1405570

Strand: Reverse

Name: 170077963

Synonym: SYNPCC7002_A1349

Alternate gene names: NA

Gene position: 1405570-1403966 (Counterclockwise)

Preceding gene: 170077967

Following gene: 170077960

Centisome position: 46.73

GC content: 51.4

Gene sequence:

>1605_bases
TTGTTTGACCAAGAACGCCTCCTTTTTGATCCTGTAACACCGACGGCCAACGCGATCCCTTTGATTTTTGCCTTTCCGAA
TACCTACACCGTGGGGATTACGAGCTTGGGCTACCAATTGGTGTGGGCAAAATTTAGCCAACGGCCCGATGTGGATGTGC
GTCGTTTATTCACAGATTTAGAGGAAAAACTGCCGTCTCAGCCAGAAATTGTCGGCTTTTCTTTTTCTTGGGAACTGGAT
TATACAAATCTCTTTAGCTTGTTAGAAAAACTAAAAATTCCGCTGCGGGCAGCCGAGCGTGACGAACAGCATCCCCTTGT
GTTTGGGGGTGGGTCGGTATTGAGTGCCAACCCTGAACCCTTTGCGGACTTTTTTGACGTGATCCTCCTGGGAGACGGGG
AAAATCTCCTGGATGAATTTATCGATCAATACCAAGGAATGCGCCAAGGCGATCGCCAAACCAAATTACGCCACCTCGCC
CAAACGCCGGGGATCTATGTGCCCAGTCTGTACGAAGTAACCTACCAGGAGCCAACGGGGGCCATTGAAACCATTCGTCC
CAAATATCCTGATATTCCTGAAAGTGTTGAAAAACAAACTTACCGGGGGAATACCCTCTCGGCCTCGACGGTGGTCACAG
AACAAGCCGCCTGGGAAAATATCTACATGGTAGAAGTGGTGCGCAGTTGCCCGGAAATGTGCCGCTTTTGCCTCGCCAGC
TATGTCACCTTGCCTTTTCGGACGGCTAATTTAGAGCAGTCCTTGATCCCGGCCATTGAGCGGGGCCTTAAAGTTACGGA
TCGCCTTGGTTTGCTCGGGGCTTCTGTGACCCAACACCCGGAATTTGAGCAACTATTAGATTATCTTTCCCAACCCCAAT
ATGCCGATGTGCGCCTGAGTATTGCCTCGGTACGGACAAACACCGTCACGGAAAAACTAGCCCGGACTCTTGCGGCACGG
GATACCCGTTCGATCACAATCGCCGTAGAAAGTGGTTCGGAACGGCTCCGGGAGATTGTCAATAAAAAGCTCACCAACGA
CGAAATTATTACCGCAGCAATAAACGCAAAAGCGGGCGGCCTCAAGGGGATTAAATTCTATGGCATGGTGGGCATTCCTG
GGGAAGAAATGGCGGATGTGGAAGCAACCGTCGCAATGATGCAGGCTGTGAAAAAAGCGGCCCCAGGCTTGCGTTTAACC
CTCGGTTGCAGCACTTTTGTTCCCAAGGCCCATACGCCTTTCCAGTGGTTTGGAGTAAACCCAGCGGCCAAAAAACGGCT
GCAATTCCTCCAAAAGCATCTCCGCTCCCAGGGGATAGAGTTCCGGCCCGAAAGCTATAACTGGTCTGTGATTCAGGGGT
TGCTTTCCAGAGGCGATCGCCGTCTCTCTAGCCTTTTAGAATTAACCAGGGATTACGGTGATACCCTCGGCAGCTACAAG
CGGGCCTTTAAGGAACTGAAAGGCAAAATTCCCCCCCTAGATTTCTATGTGCATCAGGATTGGGCGACAACTCAGGTCTT
ACCCTGGCAGCATTTGAATACGGCGATCCCCAAGGTCACCATCAAAAAACACCTGGCAACGGCGGGAGTGCCCCTCCAGG
TTTAG

Upstream 100 bases:

>100_bases
AAGATCCGTCATTTTCTGTCCTCTTTGCGGCGATCGCCAATCGCTGAGGGGACTCCCTTACAATGGCAAGGGTACAAAAC
TTTTTCTGACCCTGACGACT

Downstream 100 bases:

>100_bases
CCCAATCTAAAACTGAAATAAGTCGGCGATCGCCTTCCCAGGATCCAGCTGTTTCACGAGAGATTCGCCGATTAACACTG
CCTTTGCTCCGGCTTCTTTG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MFDQERLLFDPVTPTANAIPLIFAFPNTYTVGITSLGYQLVWAKFSQRPDVDVRRLFTDLEEKLPSQPEIVGFSFSWELD
YTNLFSLLEKLKIPLRAAERDEQHPLVFGGGSVLSANPEPFADFFDVILLGDGENLLDEFIDQYQGMRQGDRQTKLRHLA
QTPGIYVPSLYEVTYQEPTGAIETIRPKYPDIPESVEKQTYRGNTLSASTVVTEQAAWENIYMVEVVRSCPEMCRFCLAS
YVTLPFRTANLEQSLIPAIERGLKVTDRLGLLGASVTQHPEFEQLLDYLSQPQYADVRLSIASVRTNTVTEKLARTLAAR
DTRSITIAVESGSERLREIVNKKLTNDEIITAAINAKAGGLKGIKFYGMVGIPGEEMADVEATVAMMQAVKKAAPGLRLT
LGCSTFVPKAHTPFQWFGVNPAAKKRLQFLQKHLRSQGIEFRPESYNWSVIQGLLSRGDRRLSSLLELTRDYGDTLGSYK
RAFKELKGKIPPLDFYVHQDWATTQVLPWQHLNTAIPKVTIKKHLATAGVPLQV

Sequences:

>Translated_534_residues
MFDQERLLFDPVTPTANAIPLIFAFPNTYTVGITSLGYQLVWAKFSQRPDVDVRRLFTDLEEKLPSQPEIVGFSFSWELD
YTNLFSLLEKLKIPLRAAERDEQHPLVFGGGSVLSANPEPFADFFDVILLGDGENLLDEFIDQYQGMRQGDRQTKLRHLA
QTPGIYVPSLYEVTYQEPTGAIETIRPKYPDIPESVEKQTYRGNTLSASTVVTEQAAWENIYMVEVVRSCPEMCRFCLAS
YVTLPFRTANLEQSLIPAIERGLKVTDRLGLLGASVTQHPEFEQLLDYLSQPQYADVRLSIASVRTNTVTEKLARTLAAR
DTRSITIAVESGSERLREIVNKKLTNDEIITAAINAKAGGLKGIKFYGMVGIPGEEMADVEATVAMMQAVKKAAPGLRLT
LGCSTFVPKAHTPFQWFGVNPAAKKRLQFLQKHLRSQGIEFRPESYNWSVIQGLLSRGDRRLSSLLELTRDYGDTLGSYK
RAFKELKGKIPPLDFYVHQDWATTQVLPWQHLNTAIPKVTIKKHLATAGVPLQV
>Mature_534_residues
MFDQERLLFDPVTPTANAIPLIFAFPNTYTVGITSLGYQLVWAKFSQRPDVDVRRLFTDLEEKLPSQPEIVGFSFSWELD
YTNLFSLLEKLKIPLRAAERDEQHPLVFGGGSVLSANPEPFADFFDVILLGDGENLLDEFIDQYQGMRQGDRQTKLRHLA
QTPGIYVPSLYEVTYQEPTGAIETIRPKYPDIPESVEKQTYRGNTLSASTVVTEQAAWENIYMVEVVRSCPEMCRFCLAS
YVTLPFRTANLEQSLIPAIERGLKVTDRLGLLGASVTQHPEFEQLLDYLSQPQYADVRLSIASVRTNTVTEKLARTLAAR
DTRSITIAVESGSERLREIVNKKLTNDEIITAAINAKAGGLKGIKFYGMVGIPGEEMADVEATVAMMQAVKKAAPGLRLT
LGCSTFVPKAHTPFQWFGVNPAAKKRLQFLQKHLRSQGIEFRPESYNWSVIQGLLSRGDRRLSSLLELTRDYGDTLGSYK
RAFKELKGKIPPLDFYVHQDWATTQVLPWQHLNTAIPKVTIKKHLATAGVPLQV

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 59964; Mature: 59964

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDQERLLFDPVTPTANAIPLIFAFPNTYTVGITSLGYQLVWAKFSQRPDVDVRRLFTDL
CCCCCCCEECCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EEKLPSQPEIVGFSFSWELDYTNLFSLLEKLKIPLRAAERDEQHPLVFGGGSVLSANPEP
HHHCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCHHHCCCCCCCCEEEECCCEECCCCCC
FADFFDVILLGDGENLLDEFIDQYQGMRQGDRQTKLRHLAQTPGIYVPSLYEVTYQEPTG
HHHHEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
AIETIRPKYPDIPESVEKQTYRGNTLSASTVVTEQAAWENIYMVEVVRSCPEMCRFCLAS
CHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
YVTLPFRTANLEQSLIPAIERGLKVTDRLGLLGASVTQHPEFEQLLDYLSQPQYADVRLS
HHHCCCEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEE
IASVRTNTVTEKLARTLAARDTRSITIAVESGSERLREIVNKKLTNDEIITAAINAKAGG
EEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCC
LKGIKFYGMVGIPGEEMADVEATVAMMQAVKKAAPGLRLTLGCSTFVPKAHTPFQWFGVN
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCC
PAAKKRLQFLQKHLRSQGIEFRPESYNWSVIQGLLSRGDRRLSSLLELTRDYGDTLGSYK
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAFKELKGKIPPLDFYVHQDWATTQVLPWQHLNTAIPKVTIKKHLATAGVPLQV
HHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFDQERLLFDPVTPTANAIPLIFAFPNTYTVGITSLGYQLVWAKFSQRPDVDVRRLFTDL
CCCCCCCEECCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EEKLPSQPEIVGFSFSWELDYTNLFSLLEKLKIPLRAAERDEQHPLVFGGGSVLSANPEP
HHHCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCHHHCCCCCCCCEEEECCCEECCCCCC
FADFFDVILLGDGENLLDEFIDQYQGMRQGDRQTKLRHLAQTPGIYVPSLYEVTYQEPTG
HHHHEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCC
AIETIRPKYPDIPESVEKQTYRGNTLSASTVVTEQAAWENIYMVEVVRSCPEMCRFCLAS
CHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
YVTLPFRTANLEQSLIPAIERGLKVTDRLGLLGASVTQHPEFEQLLDYLSQPQYADVRLS
HHHCCCEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEE
IASVRTNTVTEKLARTLAARDTRSITIAVESGSERLREIVNKKLTNDEIITAAINAKAGG
EEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCC
LKGIKFYGMVGIPGEEMADVEATVAMMQAVKKAAPGLRLTLGCSTFVPKAHTPFQWFGVN
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCC
PAAKKRLQFLQKHLRSQGIEFRPESYNWSVIQGLLSRGDRRLSSLLELTRDYGDTLGSYK
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAFKELKGKIPPLDFYVHQDWATTQVLPWQHLNTAIPKVTIKKHLATAGVPLQV
HHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]