Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077960

Identifier: 170077960

GI number: 170077960

Start: 1401713

End: 1402657

Strand: Reverse

Name: 170077960

Synonym: SYNPCC7002_A1346

Alternate gene names: NA

Gene position: 1402657-1401713 (Counterclockwise)

Preceding gene: 170077963

Following gene: 170077959

Centisome position: 46.63

GC content: 52.8

Gene sequence:

>945_bases
ATGGTCGCTTTGCAACAGTGGTTTACCCTGATGATCGCCCAATGGCTGATCCTTTGGCCCTGGCTTTTTGTGGGGGTATG
TCTCTCGACGGTGGCTTTAATTTTTACGCCCCGTCCCTGGTGGGAAAAAGTTCTTCCCCAAAGCGCCTGGTTACAATTAC
TGGCTGGTCTTGGCCTCGGCTTTATCCTACCTGTGGGTCAAGTGGGTGGGCTGCCCCTCCTGCGACGGCTCCTATGGCAA
TCCGGCTCCTCGGCGGGGGCGATCGCCTTTTGGTTGGGGACTGTTTCCCTGAGTCCCTTTGTGCTCGCTAAATTCTGGCA
GCAGCTACCTGGTCGGGGAGGACTTGTGTTGTTCTATGGCAGCCTGAGCCTAGGGATTTTGCTTTTAATTGCCAGTATTT
TTGTGGGGGCGCGTCAACAGCGCAGTTACCAACAGGGAGATCTAGACACTTTTTTGTATCCGGCGATCGCCCGTCCCAGT
TCCCACCGCATTCCCAATACCCAACCAGAAACCCTGGCGCCACCGAGTAAATTAACCATTCTGCCCACTTCTCGCCGATT
TCGATCCCTCATGGCGAGCCAAAACCTTATGCAAGAACTGCTGGAATGGTCGGTTTGGCTCCTGATCGCCTGTGGTGTGA
TGGCTTGTGGCCAAGTCCTTTTCCCCCTAGAAACATTACTCAGCCACGGTATGACGGGTCTATTTGGCGCGGGGATCTTG
TACGCTGTTCAACCGACACAAATGGCGGCGATCGCCGATCTGATCTTGGGGAATAATAGCCCTGGTGTTGCCCTTGGCTT
TCTCCTGACTGGGACTTTCTTCAATGGCATCACCCTAATTTTGTTGATTAATGTTGTCCGCTGGCGGGCCTATTTTTATC
TCAGTCTGCTTTTGGGGTTGACCCTCCTGGCCCTGGATCTATGGCTGAATTTTTATGTTTTTTAA

Upstream 100 bases:

>100_bases
GGGGGGTGTCTGACCGGGGCGATCGCCGCTCAAAATCGAGCAAAAGACCAGGGATCGGTTAGGGTAAATGGAGCAATTTT
TCTGGAATTTAGGTGTGGTA

Downstream 100 bases:

>100_bases
TCTTTTGTAAGTGCCTACTTTTAGTGGCCCAAAGAAAAATCACGTTCCCCCAGATCTCCTAGATTGGGTGATATCGTTAG
AGGCAAGAAGCAAAGCGCTT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MVALQQWFTLMIAQWLILWPWLFVGVCLSTVALIFTPRPWWEKVLPQSAWLQLLAGLGLGFILPVGQVGGLPLLRRLLWQ
SGSSAGAIAFWLGTVSLSPFVLAKFWQQLPGRGGLVLFYGSLSLGILLLIASIFVGARQQRSYQQGDLDTFLYPAIARPS
SHRIPNTQPETLAPPSKLTILPTSRRFRSLMASQNLMQELLEWSVWLLIACGVMACGQVLFPLETLLSHGMTGLFGAGIL
YAVQPTQMAAIADLILGNNSPGVALGFLLTGTFFNGITLILLINVVRWRAYFYLSLLLGLTLLALDLWLNFYVF

Sequences:

>Translated_314_residues
MVALQQWFTLMIAQWLILWPWLFVGVCLSTVALIFTPRPWWEKVLPQSAWLQLLAGLGLGFILPVGQVGGLPLLRRLLWQ
SGSSAGAIAFWLGTVSLSPFVLAKFWQQLPGRGGLVLFYGSLSLGILLLIASIFVGARQQRSYQQGDLDTFLYPAIARPS
SHRIPNTQPETLAPPSKLTILPTSRRFRSLMASQNLMQELLEWSVWLLIACGVMACGQVLFPLETLLSHGMTGLFGAGIL
YAVQPTQMAAIADLILGNNSPGVALGFLLTGTFFNGITLILLINVVRWRAYFYLSLLLGLTLLALDLWLNFYVF
>Mature_314_residues
MVALQQWFTLMIAQWLILWPWLFVGVCLSTVALIFTPRPWWEKVLPQSAWLQLLAGLGLGFILPVGQVGGLPLLRRLLWQ
SGSSAGAIAFWLGTVSLSPFVLAKFWQQLPGRGGLVLFYGSLSLGILLLIASIFVGARQQRSYQQGDLDTFLYPAIARPS
SHRIPNTQPETLAPPSKLTILPTSRRFRSLMASQNLMQELLEWSVWLLIACGVMACGQVLFPLETLLSHGMTGLFGAGIL
YAVQPTQMAAIADLILGNNSPGVALGFLLTGTFFNGITLILLINVVRWRAYFYLSLLLGLTLLALDLWLNFYVF

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34722; Mature: 34722

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALQQWFTLMIAQWLILWPWLFVGVCLSTVALIFTPRPWWEKVLPQSAWLQLLAGLGLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCHH
FILPVGQVGGLPLLRRLLWQSGSSAGAIAFWLGTVSLSPFVLAKFWQQLPGRGGLVLFYG
HHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEC
SLSLGILLLIASIFVGARQQRSYQQGDLDTFLYPAIARPSSHRIPNTQPETLAPPSKLTI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LPTSRRFRSLMASQNLMQELLEWSVWLLIACGVMACGQVLFPLETLLSHGMTGLFGAGIL
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHH
YAVQPTQMAAIADLILGNNSPGVALGFLLTGTFFNGITLILLINVVRWRAYFYLSLLLGL
EEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLALDLWLNFYVF
HHHHHHHHHHHHCC
>Mature Secondary Structure
MVALQQWFTLMIAQWLILWPWLFVGVCLSTVALIFTPRPWWEKVLPQSAWLQLLAGLGLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCHH
FILPVGQVGGLPLLRRLLWQSGSSAGAIAFWLGTVSLSPFVLAKFWQQLPGRGGLVLFYG
HHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEC
SLSLGILLLIASIFVGARQQRSYQQGDLDTFLYPAIARPSSHRIPNTQPETLAPPSKLTI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LPTSRRFRSLMASQNLMQELLEWSVWLLIACGVMACGQVLFPLETLLSHGMTGLFGAGIL
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHH
YAVQPTQMAAIADLILGNNSPGVALGFLLTGTFFNGITLILLINVVRWRAYFYLSLLLGL
EEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLALDLWLNFYVF
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA