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The map label for this gene is psbY

Identifier: 170077961

GI number: 170077961

Start: 1402862

End: 1402978

Strand: Direct

Name: psbY

Synonym: SYNPCC7002_A1347

Alternate gene names: 170077961

Gene position: 1402862-1402978 (Clockwise)

Preceding gene: 170077957

Following gene: 170077962

Centisome position: 46.64

GC content: 46.15

Gene sequence:

>117_bases
ATGGATTGGCGAGTTGTTGTTGTTTTAGCTCCCGTAATCATCGCTGGCTCTTGGGCAATCTTTAACATTGCTGCGGCTGC
CCTGAACCAACTCCGCAATATGCAAACGAAGAAATAA

Upstream 100 bases:

>100_bases
GATCTTCTTGCAACCCTTGGAAAAAGGAGCTTAATGGGTTATTAGTATAGAATTGAAAAACTTTGTTTATCATCATTTTT
TAACTGAGAGGAATCAAACC

Downstream 100 bases:

>100_bases
GTCTTTATCTCTACTGCTTTTCGCGTAAATTACCCTTTGTTTTTGACAGGAGCAGCCCCTAGGGGTTGCTTTTTCATCCC
CAGCAAATCTATGACTGTGC

Product: photosystem II PsbY protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MDWRVVVVLAPVIIAGSWAIFNIAAAALNQLRNMQTKK

Sequences:

>Translated_38_residues
MDWRVVVVLAPVIIAGSWAIFNIAAAALNQLRNMQTKK
>Mature_38_residues
MDWRVVVVLAPVIIAGSWAIFNIAAAALNQLRNMQTKK

Specific function: Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbY family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBY_SYNP2 (B1XLQ0)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734599.1
- GeneID:   6056526
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1347
- HOGENOM:   HBG724915
- GO:   GO:0015979
- HAMAP:   MF_00717
- InterPro:   IPR009388

Pfam domain/function: PF06298 PsbY

EC number: NA

Molecular weight: Translated: 4210; Mature: 4210

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1b7ee4c4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRVVVVLAPVIIAGSWAIFNIAAAALNQLRNMQTKK
CCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MDWRVVVVLAPVIIAGSWAIFNIAAAALNQLRNMQTKK
CCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA