| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077948
Identifier: 170077948
GI number: 170077948
Start: 1388115
End: 1389263
Strand: Direct
Name: 170077948
Synonym: SYNPCC7002_A1333
Alternate gene names: NA
Gene position: 1388115-1389263 (Clockwise)
Preceding gene: 170077945
Following gene: 170077950
Centisome position: 46.15
GC content: 48.83
Gene sequence:
>1149_bases ATGTTTTGTACTGTTCCAAAGCCAATGAGTGACCAATTTGTTGAACAAAAAACAACGGGGTATTTTCAGCGCCTCGGCAA CTCGATTGTGGGAATTTTCCTAGGGGTTGTTCTCTTTTTAGCGTCCTTTGGGGTGCTCTACTGGAATGAAGGCCGGGTAG ACCTCTCGAAAATTGCGGCCACAGCCACGGAAATTCCCGCCACCGGCACCACCACGGTAAAAGCCAATAGTTTTGTATCA ATTACGGGTAACCTAAGCAGCCCAGAAACCCTCGGCGATCCCCCCTATTTAAAACCCGGTGAATACATCGCCCTCCGGCG CAAAACAGAGATGTATGCCTGGGAAGAAAATAGCCGCACTACCACCAAGAAAAATGCCGGGGGTTCAGAAACGAAAACGA CGACCTATACCTACGCCAAGGAGTGGGCCGAAAATCCCGATGATTCCTCTCGTTTTAAAAATCCAACGGGTCATAATAAT CCAGCCAAAAGCATCGAGAGTCAAGAACTGCGGGTTCCCCAGGCCCAGGTGGGTGATTATCAACTGGATGTAAATCAGTT GCAGTTTCCCATCAACCAACCCGTTAATTTAACGGCGGCCCAGATCCCGGCAGAATCAAAAAACAAACTCAACGGCAGTT ATTTATTTTTTGGAACAGGTAGCCTCGGCAGTCCGGAAATTGGCGATCTGCGCCTCAGTTATCAAGCCCTAAACAAAAAT ATTCAAGCGACGGTCTTCGGTGATTTGGGCAGCAGTAACCAACTCACGCCCCACCAAGGCAAAAAAAATGTGACTTTTTA TCGACTCTTTCCGGGTACCCGTGACCAGGCGATCGCCAACCTAGCAACCCAACATAAGTTGATCACCTGGGGCCTACGGT TTGGGGGCTTTTTGCTGATGTGGATTGGTCTGAATCTGGTGGTAGAACCCCTCGGTGTTGTTCTAGATGTCATTCCCTTT TTAGGAGATCTAGCCCGCACTGCTACAGGGTTTGCCACGTTTATTGTGGCGGCGATTTTGTCTGGGTTAACGATCATTGT GTCGATTATTCTCCACAGCCCGGTCATGATTTTTCTCGCCCTCGGTCTCTGTGGCTTCATTGTCTACCGCTGGACAAAAC GTAAAAAGACCAAGGATCAACTGGCTTAG
Upstream 100 bases:
>100_bases CACAAAGTCCAAAAAAACGAGGCCCAAGTTATATCCTGAAAGCACCTTAATTCACCGATTAACCGAAAGCTTTCCCTCGG CTGAGGTGGATATAAAGGCA
Downstream 100 bases:
>100_bases GTTCTCCCTGGTCAAGCAAGAATTTAAAAAGATTTGGGAACGGCGGTCGTTCCTTTTTTTGTGGAAATTAGCCCAAACGA CGTTTAAGAAGCGGTTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MFCTVPKPMSDQFVEQKTTGYFQRLGNSIVGIFLGVVLFLASFGVLYWNEGRVDLSKIAATATEIPATGTTTVKANSFVS ITGNLSSPETLGDPPYLKPGEYIALRRKTEMYAWEENSRTTTKKNAGGSETKTTTYTYAKEWAENPDDSSRFKNPTGHNN PAKSIESQELRVPQAQVGDYQLDVNQLQFPINQPVNLTAAQIPAESKNKLNGSYLFFGTGSLGSPEIGDLRLSYQALNKN IQATVFGDLGSSNQLTPHQGKKNVTFYRLFPGTRDQAIANLATQHKLITWGLRFGGFLLMWIGLNLVVEPLGVVLDVIPF LGDLARTATGFATFIVAAILSGLTIIVSIILHSPVMIFLALGLCGFIVYRWTKRKKTKDQLA
Sequences:
>Translated_382_residues MFCTVPKPMSDQFVEQKTTGYFQRLGNSIVGIFLGVVLFLASFGVLYWNEGRVDLSKIAATATEIPATGTTTVKANSFVS ITGNLSSPETLGDPPYLKPGEYIALRRKTEMYAWEENSRTTTKKNAGGSETKTTTYTYAKEWAENPDDSSRFKNPTGHNN PAKSIESQELRVPQAQVGDYQLDVNQLQFPINQPVNLTAAQIPAESKNKLNGSYLFFGTGSLGSPEIGDLRLSYQALNKN IQATVFGDLGSSNQLTPHQGKKNVTFYRLFPGTRDQAIANLATQHKLITWGLRFGGFLLMWIGLNLVVEPLGVVLDVIPF LGDLARTATGFATFIVAAILSGLTIIVSIILHSPVMIFLALGLCGFIVYRWTKRKKTKDQLA >Mature_382_residues MFCTVPKPMSDQFVEQKTTGYFQRLGNSIVGIFLGVVLFLASFGVLYWNEGRVDLSKIAATATEIPATGTTTVKANSFVS ITGNLSSPETLGDPPYLKPGEYIALRRKTEMYAWEENSRTTTKKNAGGSETKTTTYTYAKEWAENPDDSSRFKNPTGHNN PAKSIESQELRVPQAQVGDYQLDVNQLQFPINQPVNLTAAQIPAESKNKLNGSYLFFGTGSLGSPEIGDLRLSYQALNKN IQATVFGDLGSSNQLTPHQGKKNVTFYRLFPGTRDQAIANLATQHKLITWGLRFGGFLLMWIGLNLVVEPLGVVLDVIPF LGDLARTATGFATFIVAAILSGLTIIVSIILHSPVMIFLALGLCGFIVYRWTKRKKTKDQLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13236587, Length=385, Percent_Identity=28.051948051948, Blast_Score=125, Evalue=7e-29, Organism=Drosophila melanogaster, GI24660508, Length=361, Percent_Identity=29.6398891966759, Blast_Score=120, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41932; Mature: 41932
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCTVPKPMSDQFVEQKTTGYFQRLGNSIVGIFLGVVLFLASFGVLYWNEGRVDLSKIAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHHH TATEIPATGTTTVKANSFVSITGNLSSPETLGDPPYLKPGEYIALRRKTEMYAWEENSRT HHHCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCC TTKKNAGGSETKTTTYTYAKEWAENPDDSSRFKNPTGHNNPAKSIESQELRVPQAQVGDY CCCCCCCCCCCCCEEEHHHHHHCCCCCCHHHCCCCCCCCCHHHCCCHHHHCCCHHHCCCE QLDVNQLQFPINQPVNLTAAQIPAESKNKLNGSYLFFGTGSLGSPEIGDLRLSYQALNKN EEEHHHEECCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEHHHHCCC IQATVFGDLGSSNQLTPHQGKKNVTFYRLFPGTRDQAIANLATQHKLITWGLRFGGFLLM CEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEEHHHHHHHHHH WIGLNLVVEPLGVVLDVIPFLGDLARTATGFATFIVAAILSGLTIIVSIILHSPVMIFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLCGFIVYRWTKRKKTKDQLA HHHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure MFCTVPKPMSDQFVEQKTTGYFQRLGNSIVGIFLGVVLFLASFGVLYWNEGRVDLSKIAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHHH TATEIPATGTTTVKANSFVSITGNLSSPETLGDPPYLKPGEYIALRRKTEMYAWEENSRT HHHCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCC TTKKNAGGSETKTTTYTYAKEWAENPDDSSRFKNPTGHNNPAKSIESQELRVPQAQVGDY CCCCCCCCCCCCCEEEHHHHHHCCCCCCHHHCCCCCCCCCHHHCCCHHHHCCCHHHCCCE QLDVNQLQFPINQPVNLTAAQIPAESKNKLNGSYLFFGTGSLGSPEIGDLRLSYQALNKN EEEHHHEECCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEHHHHCCC IQATVFGDLGSSNQLTPHQGKKNVTFYRLFPGTRDQAIANLATQHKLITWGLRFGGFLLM CEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEEHHHHHHHHHH WIGLNLVVEPLGVVLDVIPFLGDLARTATGFATFIVAAILSGLTIIVSIILHSPVMIFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLCGFIVYRWTKRKKTKDQLA HHHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA