Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077945

Identifier: 170077945

GI number: 170077945

Start: 1384402

End: 1385343

Strand: Direct

Name: 170077945

Synonym: SYNPCC7002_A1330

Alternate gene names: NA

Gene position: 1384402-1385343 (Clockwise)

Preceding gene: 170077944

Following gene: 170077948

Centisome position: 46.02

GC content: 54.35

Gene sequence:

>942_bases
ATGATTAAACGGTTTTTTTATGGGGCGATCGCCATTGTCTTGGCCTTTACCCTGATCTTTACCCCAGCGGATAATGCTTG
GGCGGCCCGCAGTGGAGGACGCATTGGTGGCGGTTCCTTCCGCAGTGCCCCTAGTCGCAGTTTTTCCCCTGGCCCAGCAC
GACGGGCTCCCGTTGGGGGTGGCTATGGTTACGGATTTGGGGGTGGATTTGGGTTCCCCTTCCTGCTGCCTTTCTTCGGA
TTCGGTGGTTTTAGCGGCATTTTCGGTCTTTTCATTATGTTGGCGATCGCCGGCTTCCTTGTCCGCACCTTCCAGAACGT
GATGGGGGGTGGCATGAACGAGGGCGACAGTCTCGGTTACTCTGCCCCCAGTAGCAAAATTTCTGTGGCGAAGGTACAGG
TGGGGCTGTTGGCCCAAGCACGGGATCTCCAGCAGGATCTAAATCGCCTGGCGAGCACCGCTGATACTGGCACCCCGGCT
GGACGCGCTAAGGTTCTTCAAGAATCGACTCTGGCCCTGTTGCGCCACCCAGAATATTGGGTCTATGGTGCGAGCGAATC
CCTCGAAGCTGGGGTTGATGCTGCCGAAGCCAAGTTTAATCAATTGGCCCTGAACGAGCGGAGTAAATTTACCGCCGAGA
CCCTTAGTAACGTTGACAACGAACGGGATGTGGCTGGGAAAAGTGGGAGTGCTGATTTGGTAAAAAGCGACGATACACCG
AACGAATACATCATGGTGACAATCATCGCTGGGGCCATGGGGAAAGTTGAGTTACCGAAAGTGACCGATTCCCAATCCCT
CGAACAAGCGATCCGTCAAATTGGTGCCCTTGGTGGCGATCGCCTTTTGGCCCTCGAAGTTTTATGGACGCCCCAAGCGA
TTGGTGACACCCTCAGCACTGACGATATTTTGACCTATTACCCCGACATTAATCTCGTATAA

Upstream 100 bases:

>100_bases
CGGTTGGTTTGATTAGGGGAAAAACCGCCAATGCTCGGAATTCTGGGGCTTGATAGAATAGATCTCAGGATTTTTACGCA
GCACATTTAACAATTCAATC

Downstream 100 bases:

>100_bases
CTAGGCCAAAATCTAAAACAATTCAACGCAAATCATGGCGATTTAAAGAATCCCCTCAATACAGGGGATTTTTTTTGATT
TCTATAGAAATTTGCCCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MIKRFFYGAIAIVLAFTLIFTPADNAWAARSGGRIGGGSFRSAPSRSFSPGPARRAPVGGGYGYGFGGGFGFPFLLPFFG
FGGFSGIFGLFIMLAIAGFLVRTFQNVMGGGMNEGDSLGYSAPSSKISVAKVQVGLLAQARDLQQDLNRLASTADTGTPA
GRAKVLQESTLALLRHPEYWVYGASESLEAGVDAAEAKFNQLALNERSKFTAETLSNVDNERDVAGKSGSADLVKSDDTP
NEYIMVTIIAGAMGKVELPKVTDSQSLEQAIRQIGALGGDRLLALEVLWTPQAIGDTLSTDDILTYYPDINLV

Sequences:

>Translated_313_residues
MIKRFFYGAIAIVLAFTLIFTPADNAWAARSGGRIGGGSFRSAPSRSFSPGPARRAPVGGGYGYGFGGGFGFPFLLPFFG
FGGFSGIFGLFIMLAIAGFLVRTFQNVMGGGMNEGDSLGYSAPSSKISVAKVQVGLLAQARDLQQDLNRLASTADTGTPA
GRAKVLQESTLALLRHPEYWVYGASESLEAGVDAAEAKFNQLALNERSKFTAETLSNVDNERDVAGKSGSADLVKSDDTP
NEYIMVTIIAGAMGKVELPKVTDSQSLEQAIRQIGALGGDRLLALEVLWTPQAIGDTLSTDDILTYYPDINLV
>Mature_313_residues
MIKRFFYGAIAIVLAFTLIFTPADNAWAARSGGRIGGGSFRSAPSRSFSPGPARRAPVGGGYGYGFGGGFGFPFLLPFFG
FGGFSGIFGLFIMLAIAGFLVRTFQNVMGGGMNEGDSLGYSAPSSKISVAKVQVGLLAQARDLQQDLNRLASTADTGTPA
GRAKVLQESTLALLRHPEYWVYGASESLEAGVDAAEAKFNQLALNERSKFTAETLSNVDNERDVAGKSGSADLVKSDDTP
NEYIMVTIIAGAMGKVELPKVTDSQSLEQAIRQIGALGGDRLLALEVLWTPQAIGDTLSTDDILTYYPDINLV

Specific function: Unknown

COG id: COG4371

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33117; Mature: 33117

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRFFYGAIAIVLAFTLIFTPADNAWAARSGGRIGGGSFRSAPSRSFSPGPARRAPVGG
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYGYGFGGGFGFPFLLPFFGFGGFSGIFGLFIMLAIAGFLVRTFQNVMGGGMNEGDSLGY
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SAPSSKISVAKVQVGLLAQARDLQQDLNRLASTADTGTPAGRAKVLQESTLALLRHPEYW
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
VYGASESLEAGVDAAEAKFNQLALNERSKFTAETLSNVDNERDVAGKSGSADLVKSDDTP
EEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEECCCCC
NEYIMVTIIAGAMGKVELPKVTDSQSLEQAIRQIGALGGDRLLALEVLWTPQAIGDTLST
CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCCC
DDILTYYPDINLV
CCEEEECCCCCCC
>Mature Secondary Structure
MIKRFFYGAIAIVLAFTLIFTPADNAWAARSGGRIGGGSFRSAPSRSFSPGPARRAPVGG
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYGYGFGGGFGFPFLLPFFGFGGFSGIFGLFIMLAIAGFLVRTFQNVMGGGMNEGDSLGY
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SAPSSKISVAKVQVGLLAQARDLQQDLNRLASTADTGTPAGRAKVLQESTLALLRHPEYW
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
VYGASESLEAGVDAAEAKFNQLALNERSKFTAETLSNVDNERDVAGKSGSADLVKSDDTP
EEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEECCCCC
NEYIMVTIIAGAMGKVELPKVTDSQSLEQAIRQIGALGGDRLLALEVLWTPQAIGDTLST
CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCCC
DDILTYYPDINLV
CCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA