| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077944
Identifier: 170077944
GI number: 170077944
Start: 1383727
End: 1384317
Strand: Direct
Name: 170077944
Synonym: SYNPCC7002_A1329
Alternate gene names: NA
Gene position: 1383727-1384317 (Clockwise)
Preceding gene: 170077943
Following gene: 170077945
Centisome position: 46.0
GC content: 50.59
Gene sequence:
>591_bases TTGGACTTAACGGTTATGGCTAGCAGCAAACAAAATTTATCGGATTTATTACGGCAGGAGGCAAAGCAGGACAAAACCAA GGCTGCTGCCCCCGAAACGGCGGTTAATGATACACCGGAGAAACCTTCACCAACAGCCCTTTCCCGGATGACGAAGGCGC AATTACTGGCCCACATTGAAACCCTCTACGCCCAACAGGAAACGGTCGCGACAGATTCTGTTGATCAAACATTGCTCACG GAGAAGGAAACCTTGGCGAGCGAAGTAAAAGCCCTGGAAGAAAAAATTGCCGCCCAACAAAAGGCGATCGCCAACGCGGA GAAAACCATTAAGACCCTCGAAGCGGATTCTTCTGAAAAGACAAAGCTCGAACAAGAGTTAGACGCACAACGGGGCCTCG TCGAAAAGTTATACGGTCAAATCCAAAGCCTCGAAGCGCAACAGACGGAAAAAGAAGCCGCCATAGAACGCACCGTTGAG GAAGACCGCGCCCTTGTACTGGCCCGCATTGCCAGTTACCAAGCAAATTTGCAATTTCCTGATCAGCCCCCCTCCAGCAT CCCCGATGAGGAAATCGGTTGGTTTGATTAG
Upstream 100 bases:
>100_bases AAGCTGTCCTCGCAGGCGTTCCCATGACCCAAATGCGTGGTAAAAAGGCTAAGGATGCGGAAACGGATTATCGTCGTGTC GCGGATGAACTGCAACGAGA
Downstream 100 bases:
>100_bases GGGAAAAACCGCCAATGCTCGGAATTCTGGGGCTTGATAGAATAGATCTCAGGATTTTTACGCAGCACATTTAACAATTC AATCATGATTAAACGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MDLTVMASSKQNLSDLLRQEAKQDKTKAAAPETAVNDTPEKPSPTALSRMTKAQLLAHIETLYAQQETVATDSVDQTLLT EKETLASEVKALEEKIAAQQKAIANAEKTIKTLEADSSEKTKLEQELDAQRGLVEKLYGQIQSLEAQQTEKEAAIERTVE EDRALVLARIASYQANLQFPDQPPSSIPDEEIGWFD
Sequences:
>Translated_196_residues MDLTVMASSKQNLSDLLRQEAKQDKTKAAAPETAVNDTPEKPSPTALSRMTKAQLLAHIETLYAQQETVATDSVDQTLLT EKETLASEVKALEEKIAAQQKAIANAEKTIKTLEADSSEKTKLEQELDAQRGLVEKLYGQIQSLEAQQTEKEAAIERTVE EDRALVLARIASYQANLQFPDQPPSSIPDEEIGWFD >Mature_196_residues MDLTVMASSKQNLSDLLRQEAKQDKTKAAAPETAVNDTPEKPSPTALSRMTKAQLLAHIETLYAQQETVATDSVDQTLLT EKETLASEVKALEEKIAAQQKAIANAEKTIKTLEADSSEKTKLEQELDAQRGLVEKLYGQIQSLEAQQTEKEAAIERTVE EDRALVLARIASYQANLQFPDQPPSSIPDEEIGWFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21655; Mature: 21655
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLTVMASSKQNLSDLLRQEAKQDKTKAAAPETAVNDTPEKPSPTALSRMTKAQLLAHIE CCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH TLYAQQETVATDSVDQTLLTEKETLASEVKALEEKIAAQQKAIANAEKTIKTLEADSSEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH TKLEQELDAQRGLVEKLYGQIQSLEAQQTEKEAAIERTVEEDRALVLARIASYQANLQFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DQPPSSIPDEEIGWFD CCCCCCCCCCCCCCCC >Mature Secondary Structure MDLTVMASSKQNLSDLLRQEAKQDKTKAAAPETAVNDTPEKPSPTALSRMTKAQLLAHIE CCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH TLYAQQETVATDSVDQTLLTEKETLASEVKALEEKIAAQQKAIANAEKTIKTLEADSSEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH TKLEQELDAQRGLVEKLYGQIQSLEAQQTEKEAAIERTVEEDRALVLARIASYQANLQFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DQPPSSIPDEEIGWFD CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA