| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077943
Identifier: 170077943
GI number: 170077943
Start: 1383101
End: 1383736
Strand: Direct
Name: 170077943
Synonym: SYNPCC7002_A1328
Alternate gene names: NA
Gene position: 1383101-1383736 (Clockwise)
Preceding gene: 170077942
Following gene: 170077944
Centisome position: 45.98
GC content: 51.57
Gene sequence:
>636_bases GTGGCATCCCAGCGGATTTTAGCAGTTGTAAATGGCAAAGGAGGCGTTGGTAAAACAACAACCGCCGTTAACCTTGCGGC CATTTTTGCCGAAAAACAGCAGGTTCTCTTGGTGGATAGCGACCCCCAGGGATCGGCCTCTTGGTGGGTGGATCGTAACC CCGATGAATGGCAACTGGATGTCAGTAGAGAACATCAACCAGATTTACTTCAAAATCTCCGACAGATTAAAGGCTATGAC TTGATCGTGGTGGATACCCCCCCAGCCTTGCGATCGCAGGCCCTCAAGACCGTCCTCCGGATTGCGGATTATGTGATCTT GCCGACACCACCAGCGCCGATGGACTTAAGCGCCTTAATTGAAACGGTGCAAACGGCCATTAATCCCGTTGAAATTAGTC ACCGAGTGCTCCTGACAAAAGTCGATAGTCGCAGCCTCCGGGAGAGCATTGATGCCCAAAATACCTTGATTGAGTTGGGG ATTCCGGTGTGCCATGCCTTTGTGCGCAGTTATAAAGCCCACGAGCAAGCTGTCCTCGCAGGCGTTCCCATGACCCAAAT GCGTGGTAAAAAGGCTAAGGATGCGGAAACGGATTATCGTCGTGTCGCGGATGAACTGCAACGAGATTGGACTTAA
Upstream 100 bases:
>100_bases CTGCTCCCTCAAGAAACGTTGCATTTACTAGGGAGTGGGAACAGAGCCGCTATAATGTCTCACCATAAATCAAGGCTAAT AAGCAAAAAACAAATCTATC
Downstream 100 bases:
>100_bases CGGTTATGGCTAGCAGCAAACAAAATTTATCGGATTTATTACGGCAGGAGGCAAAGCAGGACAAAACCAAGGCTGCTGCC CCCGAAACGGCGGTTAATGA
Product: CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein
Products: NA
Alternate protein names: Cobyrinic Acid Ac-Diamide Synthase; ParA Family Chromosome Partitioning ATPase; Plasmid Partitioning Protein; CobQ/CobB/MinD/ParA Domain-Containing Protein; ATPases Involved In Chromosome Partitioning; Plasmid Partitioning Protein-Like; ParA Family Plasmid Partitioning Protein; Partition Protein A; ParA Family Chromosome Partitioning Protein
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MASQRILAVVNGKGGVGKTTTAVNLAAIFAEKQQVLLVDSDPQGSASWWVDRNPDEWQLDVSREHQPDLLQNLRQIKGYD LIVVDTPPALRSQALKTVLRIADYVILPTPPAPMDLSALIETVQTAINPVEISHRVLLTKVDSRSLRESIDAQNTLIELG IPVCHAFVRSYKAHEQAVLAGVPMTQMRGKKAKDAETDYRRVADELQRDWT
Sequences:
>Translated_211_residues MASQRILAVVNGKGGVGKTTTAVNLAAIFAEKQQVLLVDSDPQGSASWWVDRNPDEWQLDVSREHQPDLLQNLRQIKGYD LIVVDTPPALRSQALKTVLRIADYVILPTPPAPMDLSALIETVQTAINPVEISHRVLLTKVDSRSLRESIDAQNTLIELG IPVCHAFVRSYKAHEQAVLAGVPMTQMRGKKAKDAETDYRRVADELQRDWT >Mature_210_residues ASQRILAVVNGKGGVGKTTTAVNLAAIFAEKQQVLLVDSDPQGSASWWVDRNPDEWQLDVSREHQPDLLQNLRQIKGYDL IVVDTPPALRSQALKTVLRIADYVILPTPPAPMDLSALIETVQTAINPVEISHRVLLTKVDSRSLRESIDAQNTLIELGI PVCHAFVRSYKAHEQAVLAGVPMTQMRGKKAKDAETDYRRVADELQRDWT
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23426; Mature: 23295
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQRILAVVNGKGGVGKTTTAVNLAAIFAEKQQVLLVDSDPQGSASWWVDRNPDEWQLD CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCEEEE VSREHQPDLLQNLRQIKGYDLIVVDTPPALRSQALKTVLRIADYVILPTPPAPMDLSALI CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHH ETVQTAINPVEISHRVLLTKVDSRSLRESIDAQNTLIELGIPVCHAFVRSYKAHEQAVLA HHHHHHCCCHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVPMTQMRGKKAKDAETDYRRVADELQRDWT CCCHHHHCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ASQRILAVVNGKGGVGKTTTAVNLAAIFAEKQQVLLVDSDPQGSASWWVDRNPDEWQLD CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCEEEE VSREHQPDLLQNLRQIKGYDLIVVDTPPALRSQALKTVLRIADYVILPTPPAPMDLSALI CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHH ETVQTAINPVEISHRVLLTKVDSRSLRESIDAQNTLIELGIPVCHAFVRSYKAHEQAVLA HHHHHHCCCHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVPMTQMRGKKAKDAETDYRRVADELQRDWT CCCHHHHCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA