Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077943

Identifier: 170077943

GI number: 170077943

Start: 1383101

End: 1383736

Strand: Direct

Name: 170077943

Synonym: SYNPCC7002_A1328

Alternate gene names: NA

Gene position: 1383101-1383736 (Clockwise)

Preceding gene: 170077942

Following gene: 170077944

Centisome position: 45.98

GC content: 51.57

Gene sequence:

>636_bases
GTGGCATCCCAGCGGATTTTAGCAGTTGTAAATGGCAAAGGAGGCGTTGGTAAAACAACAACCGCCGTTAACCTTGCGGC
CATTTTTGCCGAAAAACAGCAGGTTCTCTTGGTGGATAGCGACCCCCAGGGATCGGCCTCTTGGTGGGTGGATCGTAACC
CCGATGAATGGCAACTGGATGTCAGTAGAGAACATCAACCAGATTTACTTCAAAATCTCCGACAGATTAAAGGCTATGAC
TTGATCGTGGTGGATACCCCCCCAGCCTTGCGATCGCAGGCCCTCAAGACCGTCCTCCGGATTGCGGATTATGTGATCTT
GCCGACACCACCAGCGCCGATGGACTTAAGCGCCTTAATTGAAACGGTGCAAACGGCCATTAATCCCGTTGAAATTAGTC
ACCGAGTGCTCCTGACAAAAGTCGATAGTCGCAGCCTCCGGGAGAGCATTGATGCCCAAAATACCTTGATTGAGTTGGGG
ATTCCGGTGTGCCATGCCTTTGTGCGCAGTTATAAAGCCCACGAGCAAGCTGTCCTCGCAGGCGTTCCCATGACCCAAAT
GCGTGGTAAAAAGGCTAAGGATGCGGAAACGGATTATCGTCGTGTCGCGGATGAACTGCAACGAGATTGGACTTAA

Upstream 100 bases:

>100_bases
CTGCTCCCTCAAGAAACGTTGCATTTACTAGGGAGTGGGAACAGAGCCGCTATAATGTCTCACCATAAATCAAGGCTAAT
AAGCAAAAAACAAATCTATC

Downstream 100 bases:

>100_bases
CGGTTATGGCTAGCAGCAAACAAAATTTATCGGATTTATTACGGCAGGAGGCAAAGCAGGACAAAACCAAGGCTGCTGCC
CCCGAAACGGCGGTTAATGA

Product: CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein

Products: NA

Alternate protein names: Cobyrinic Acid Ac-Diamide Synthase; ParA Family Chromosome Partitioning ATPase; Plasmid Partitioning Protein; CobQ/CobB/MinD/ParA Domain-Containing Protein; ATPases Involved In Chromosome Partitioning; Plasmid Partitioning Protein-Like; ParA Family Plasmid Partitioning Protein; Partition Protein A; ParA Family Chromosome Partitioning Protein

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MASQRILAVVNGKGGVGKTTTAVNLAAIFAEKQQVLLVDSDPQGSASWWVDRNPDEWQLDVSREHQPDLLQNLRQIKGYD
LIVVDTPPALRSQALKTVLRIADYVILPTPPAPMDLSALIETVQTAINPVEISHRVLLTKVDSRSLRESIDAQNTLIELG
IPVCHAFVRSYKAHEQAVLAGVPMTQMRGKKAKDAETDYRRVADELQRDWT

Sequences:

>Translated_211_residues
MASQRILAVVNGKGGVGKTTTAVNLAAIFAEKQQVLLVDSDPQGSASWWVDRNPDEWQLDVSREHQPDLLQNLRQIKGYD
LIVVDTPPALRSQALKTVLRIADYVILPTPPAPMDLSALIETVQTAINPVEISHRVLLTKVDSRSLRESIDAQNTLIELG
IPVCHAFVRSYKAHEQAVLAGVPMTQMRGKKAKDAETDYRRVADELQRDWT
>Mature_210_residues
ASQRILAVVNGKGGVGKTTTAVNLAAIFAEKQQVLLVDSDPQGSASWWVDRNPDEWQLDVSREHQPDLLQNLRQIKGYDL
IVVDTPPALRSQALKTVLRIADYVILPTPPAPMDLSALIETVQTAINPVEISHRVLLTKVDSRSLRESIDAQNTLIELGI
PVCHAFVRSYKAHEQAVLAGVPMTQMRGKKAKDAETDYRRVADELQRDWT

Specific function: Unknown

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23426; Mature: 23295

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQRILAVVNGKGGVGKTTTAVNLAAIFAEKQQVLLVDSDPQGSASWWVDRNPDEWQLD
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCEEEE
VSREHQPDLLQNLRQIKGYDLIVVDTPPALRSQALKTVLRIADYVILPTPPAPMDLSALI
CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHH
ETVQTAINPVEISHRVLLTKVDSRSLRESIDAQNTLIELGIPVCHAFVRSYKAHEQAVLA
HHHHHHCCCHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVPMTQMRGKKAKDAETDYRRVADELQRDWT
CCCHHHHCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASQRILAVVNGKGGVGKTTTAVNLAAIFAEKQQVLLVDSDPQGSASWWVDRNPDEWQLD
CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCEEEE
VSREHQPDLLQNLRQIKGYDLIVVDTPPALRSQALKTVLRIADYVILPTPPAPMDLSALI
CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHH
ETVQTAINPVEISHRVLLTKVDSRSLRESIDAQNTLIELGIPVCHAFVRSYKAHEQAVLA
HHHHHHCCCHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVPMTQMRGKKAKDAETDYRRVADELQRDWT
CCCHHHHCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA