Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077898

Identifier: 170077898

GI number: 170077898

Start: 1332873

End: 1334090

Strand: Reverse

Name: 170077898

Synonym: SYNPCC7002_A1283

Alternate gene names: NA

Gene position: 1334090-1332873 (Counterclockwise)

Preceding gene: 170077901

Following gene: 170077897

Centisome position: 44.35

GC content: 53.94

Gene sequence:

>1218_bases
ATGTCTGCTCCAGGCCCCTACCAAAGTAAACTCTTTAACTTTCTCAATCGTCAATCGATCCAGTGGGGAAGCCGACTGAC
CCAGGCCGCCCGCCGCCTTAAAATTACGGTGGAGTGGGGTAGCCAAATCGCTCTGTATCCGCTGTATCTACTGGTGCAAA
CCAGCCGCGTTGCGGTGCGTCAAATTGCCGCCGCCCAAACAGAACGCAAACGCCTTGCCCTCGCGGAGGCAGCGACCCAA
ACATCGGATTTTCCCCTCAGCATTTCTGGAGGTGACGGTACAACTCAGCCCCCCCTCCAAGGCATTGCCTGCGACCTCAA
AACCCAGGACATTTTATTTGTCGATCAAGACAATCACACCGTTGAACCTCAACAATCCCAAACAGAATTACAGCGACAAA
TCAGTTTTCACCTCGGCAGCGTTAACTATCAAAAAAGACAGCAGGATCTCGTGAGCCAAACCCCAAATCCTCGGATTCTC
CCGCCCGTGCATCACCATAATCCCCGGCTGCTAGCTCCGGTACGTTGGTTGATGCAGGGTTTAAGTTGGCTTGAACAAAG
TCCGGTGGCGATCGCCATTGATCTCTTCGGCGAATCCCATTGGCACACGGCGGTGGTTCCTCCCGAAATTTATTCGCCCC
AGCTTTTACCCCCGTTGCCCCTCGCCCCAGTGCTTAAGCCCCTAGATCAACGGCTAGCCCAGTTAGAACAGCGGGTTCTG
GCGCCCACGATGCCCGTCGAAGCCTTACCACCCCTGCAACGTTTTTTTCGCAACTGGTTTAAGATTCAACCCGCCACCAG
TACCATCACGGCCCCTGACCCCGTTGTCACCCCCAAGCCCTGGCTAACCTGGGCCGACCTCTTCCAAGCCAAAACAAAAT
CTGCCGCGGCCATTGATCAAGCTAATCTTAATTCGCTTCAGGCTCAACTGAGTCCACTGCCGCCATTGATCACAACTTTA
GACCTACCAATTTCTCGCCCTGAATCGGGGGCGATCGCCACGGTCAAATCCCAGACCCAGAGCCTCACCCAGCCGGATGC
CCCCCCCAATGCGACGGAGATTGAGGCGAAACCGGAGTGGATAGAAGCGGAGGCCCTCAGCGTTGGTTACGAGCAACATT
TTTTGGAGCGACTTTTAAAAGCGCTGGATCACCTTTTGGCTTGGGTTGAACATACGGCCAGCCAACTCTTTAAAAAACTA
AATCAGCTTAGGAAATAA

Upstream 100 bases:

>100_bases
AGTATCCGCCAAATGGATGGTTCGTCGATAAGCGTAAGCCATAAACTTCGATTCCGAAATCTCTATGGGACAATAAAAGC
GTTGTGCCGCAAAAATGACG

Downstream 100 bases:

>100_bases
ACAAAACCAGTCAACGGCACTGCGACAAGCAAATGTCATCAGGATCGGTAGCCCAGCAAGCTAAAATTGGAGTGTTGTCA
AAAACCTTAGCACTCTCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSAPGPYQSKLFNFLNRQSIQWGSRLTQAARRLKITVEWGSQIALYPLYLLVQTSRVAVRQIAAAQTERKRLALAEAATQ
TSDFPLSISGGDGTTQPPLQGIACDLKTQDILFVDQDNHTVEPQQSQTELQRQISFHLGSVNYQKRQQDLVSQTPNPRIL
PPVHHHNPRLLAPVRWLMQGLSWLEQSPVAIAIDLFGESHWHTAVVPPEIYSPQLLPPLPLAPVLKPLDQRLAQLEQRVL
APTMPVEALPPLQRFFRNWFKIQPATSTITAPDPVVTPKPWLTWADLFQAKTKSAAAIDQANLNSLQAQLSPLPPLITTL
DLPISRPESGAIATVKSQTQSLTQPDAPPNATEIEAKPEWIEAEALSVGYEQHFLERLLKALDHLLAWVEHTASQLFKKL
NQLRK

Sequences:

>Translated_405_residues
MSAPGPYQSKLFNFLNRQSIQWGSRLTQAARRLKITVEWGSQIALYPLYLLVQTSRVAVRQIAAAQTERKRLALAEAATQ
TSDFPLSISGGDGTTQPPLQGIACDLKTQDILFVDQDNHTVEPQQSQTELQRQISFHLGSVNYQKRQQDLVSQTPNPRIL
PPVHHHNPRLLAPVRWLMQGLSWLEQSPVAIAIDLFGESHWHTAVVPPEIYSPQLLPPLPLAPVLKPLDQRLAQLEQRVL
APTMPVEALPPLQRFFRNWFKIQPATSTITAPDPVVTPKPWLTWADLFQAKTKSAAAIDQANLNSLQAQLSPLPPLITTL
DLPISRPESGAIATVKSQTQSLTQPDAPPNATEIEAKPEWIEAEALSVGYEQHFLERLLKALDHLLAWVEHTASQLFKKL
NQLRK
>Mature_404_residues
SAPGPYQSKLFNFLNRQSIQWGSRLTQAARRLKITVEWGSQIALYPLYLLVQTSRVAVRQIAAAQTERKRLALAEAATQT
SDFPLSISGGDGTTQPPLQGIACDLKTQDILFVDQDNHTVEPQQSQTELQRQISFHLGSVNYQKRQQDLVSQTPNPRILP
PVHHHNPRLLAPVRWLMQGLSWLEQSPVAIAIDLFGESHWHTAVVPPEIYSPQLLPPLPLAPVLKPLDQRLAQLEQRVLA
PTMPVEALPPLQRFFRNWFKIQPATSTITAPDPVVTPKPWLTWADLFQAKTKSAAAIDQANLNSLQAQLSPLPPLITTLD
LPISRPESGAIATVKSQTQSLTQPDAPPNATEIEAKPEWIEAEALSVGYEQHFLERLLKALDHLLAWVEHTASQLFKKLN
QLRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45290; Mature: 45159

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPGPYQSKLFNFLNRQSIQWGSRLTQAARRLKITVEWGSQIALYPLYLLVQTSRVAVR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHH
QIAAAQTERKRLALAEAATQTSDFPLSISGGDGTTQPPLQGIACDLKTQDILFVDQDNHT
HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEEECCCCC
VEPQQSQTELQRQISFHLGSVNYQKRQQDLVSQTPNPRILPPVHHHNPRLLAPVRWLMQG
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LSWLEQSPVAIAIDLFGESHWHTAVVPPEIYSPQLLPPLPLAPVLKPLDQRLAQLEQRVL
HHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
APTMPVEALPPLQRFFRNWFKIQPATSTITAPDPVVTPKPWLTWADLFQAKTKSAAAIDQ
CCCCCCCCCCHHHHHHHHHHEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ANLNSLQAQLSPLPPLITTLDLPISRPESGAIATVKSQTQSLTQPDAPPNATEIEAKPEW
HHHHHHHHHHCCCCCHHHEECCCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCH
IEAEALSVGYEQHFLERLLKALDHLLAWVEHTASQLFKKLNQLRK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAPGPYQSKLFNFLNRQSIQWGSRLTQAARRLKITVEWGSQIALYPLYLLVQTSRVAVR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHH
QIAAAQTERKRLALAEAATQTSDFPLSISGGDGTTQPPLQGIACDLKTQDILFVDQDNHT
HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEEECCCCC
VEPQQSQTELQRQISFHLGSVNYQKRQQDLVSQTPNPRILPPVHHHNPRLLAPVRWLMQG
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LSWLEQSPVAIAIDLFGESHWHTAVVPPEIYSPQLLPPLPLAPVLKPLDQRLAQLEQRVL
HHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
APTMPVEALPPLQRFFRNWFKIQPATSTITAPDPVVTPKPWLTWADLFQAKTKSAAAIDQ
CCCCCCCCCCHHHHHHHHHHEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ANLNSLQAQLSPLPPLITTLDLPISRPESGAIATVKSQTQSLTQPDAPPNATEIEAKPEW
HHHHHHHHHHCCCCCHHHEECCCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCH
IEAEALSVGYEQHFLERLLKALDHLLAWVEHTASQLFKKLNQLRK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA