| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077897
Identifier: 170077897
GI number: 170077897
Start: 1331931
End: 1332770
Strand: Reverse
Name: 170077897
Synonym: SYNPCC7002_A1282
Alternate gene names: NA
Gene position: 1332770-1331931 (Counterclockwise)
Preceding gene: 170077898
Following gene: 170077894
Centisome position: 44.31
GC content: 51.55
Gene sequence:
>840_bases ATGGTGGCGATCGCACTTGTGGGTAAAGGACTAAAAAGTCTAGGGCTAGGCGCGTTAGCATTGGCTTCTGGAGCCGCAAT TATTACCCTGCAACAGTTCCGTCTCAATAATTTGAAGCAAGCCACCGACTTAACCCCAGAAATTGTCGAGCGTCAGGCAC AAACGGAAGCGGCCAGTTTAGACCTGTGGCAACAACTGCCCACCTACGGTTACGACAATTTAGTTTCCGACTGGATTTTT CTGCGATTTTTACAATACTTTGGGGATGATGAGGCGCGAAAATTGGGGGATTATCGCCTCAGTACGGATTATTTTGAGGT CATCGTCGATTTAGACCCTTGGTTTAAGGAAGGCTATTACTATCTATCGGGGAGTAGTTCCCTCTACGCTGGTACCCCAG ACCGCACCGTCGAGTTGTTAAATCGTGGCCTGGCCGAGATGACCCCCACTGTCCCGGATCAAAGTTTTTATCTCTGGCGC ATGAAAGCCATTGACGAGCATCTTTTCCTGGGTGATATCCCCGCCGCCATTCAATCCTATAAAACGGCGGCGGCCTGGGC GGCCTACTATGATGACCCCGAAAGTCAAAATGCCCAACAACGCTCTGAGGCCAGTGTTGCCTTTTTGGAACGGGATCCCC GTAGTATTATGGCGCGGGTAACGGCTTGGTCGTCGATTTTGGGGCAGGCGCGGGATGTGGAAACCCAGAGACGGGCGATC GCCGAGCTAGAGGCGATGGGAGTCATTGTTCGCATTGATGAAAATGGCAGACCCCGCTTTCAGGTGCCGCCGGAGATCCT AGAGGCGGAAAAAGAGGCTTTCCAAATTGAGGAAAATTAA
Upstream 100 bases:
>100_bases AAAACCAGTCAACGGCACTGCGACAAGCAAATGTCATCAGGATCGGTAGCCCAGCAAGCTAAAATTGGAGTGTTGTCAAA AACCTTAGCACTCTCGGATT
Downstream 100 bases:
>100_bases AGATTCGATGACCCAGAAAATTCCGCAAAGCACCGCTGGAATATTTCGATAAATCCTTGGATCTGTTGGGGGCTATGGGT CGCCATCACCGACACGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MVAIALVGKGLKSLGLGALALASGAAIITLQQFRLNNLKQATDLTPEIVERQAQTEAASLDLWQQLPTYGYDNLVSDWIF LRFLQYFGDDEARKLGDYRLSTDYFEVIVDLDPWFKEGYYYLSGSSSLYAGTPDRTVELLNRGLAEMTPTVPDQSFYLWR MKAIDEHLFLGDIPAAIQSYKTAAAWAAYYDDPESQNAQQRSEASVAFLERDPRSIMARVTAWSSILGQARDVETQRRAI AELEAMGVIVRIDENGRPRFQVPPEILEAEKEAFQIEEN
Sequences:
>Translated_279_residues MVAIALVGKGLKSLGLGALALASGAAIITLQQFRLNNLKQATDLTPEIVERQAQTEAASLDLWQQLPTYGYDNLVSDWIF LRFLQYFGDDEARKLGDYRLSTDYFEVIVDLDPWFKEGYYYLSGSSSLYAGTPDRTVELLNRGLAEMTPTVPDQSFYLWR MKAIDEHLFLGDIPAAIQSYKTAAAWAAYYDDPESQNAQQRSEASVAFLERDPRSIMARVTAWSSILGQARDVETQRRAI AELEAMGVIVRIDENGRPRFQVPPEILEAEKEAFQIEEN >Mature_279_residues MVAIALVGKGLKSLGLGALALASGAAIITLQQFRLNNLKQATDLTPEIVERQAQTEAASLDLWQQLPTYGYDNLVSDWIF LRFLQYFGDDEARKLGDYRLSTDYFEVIVDLDPWFKEGYYYLSGSSSLYAGTPDRTVELLNRGLAEMTPTVPDQSFYLWR MKAIDEHLFLGDIPAAIQSYKTAAAWAAYYDDPESQNAQQRSEASVAFLERDPRSIMARVTAWSSILGQARDVETQRRAI AELEAMGVIVRIDENGRPRFQVPPEILEAEKEAFQIEEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31435; Mature: 31435
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAIALVGKGLKSLGLGALALASGAAIITLQQFRLNNLKQATDLTPEIVERQAQTEAASL CEEEEEECCCHHHHCCHHHHHHCCCEEEEEHHHHHCCHHHHHCCCHHHHHHHHHHHHHHH DLWQQLPTYGYDNLVSDWIFLRFLQYFGDDEARKLGDYRLSTDYFEVIVDLDPWFKEGYY HHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEECCCHHHHCCEE YLSGSSSLYAGTPDRTVELLNRGLAEMTPTVPDQSFYLWRMKAIDEHLFLGDIPAAIQSY EEECCCEEECCCCHHHHHHHHCCHHHCCCCCCCCCEEEEEHHHHHHHHEECCHHHHHHHH KTAAAWAAYYDDPESQNAQQRSEASVAFLERDPRSIMARVTAWSSILGQARDVETQRRAI HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELEAMGVIVRIDENGRPRFQVPPEILEAEKEAFQIEEN HHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MVAIALVGKGLKSLGLGALALASGAAIITLQQFRLNNLKQATDLTPEIVERQAQTEAASL CEEEEEECCCHHHHCCHHHHHHCCCEEEEEHHHHHCCHHHHHCCCHHHHHHHHHHHHHHH DLWQQLPTYGYDNLVSDWIFLRFLQYFGDDEARKLGDYRLSTDYFEVIVDLDPWFKEGYY HHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEECCCHHHHCCEE YLSGSSSLYAGTPDRTVELLNRGLAEMTPTVPDQSFYLWRMKAIDEHLFLGDIPAAIQSY EEECCCEEECCCCHHHHHHHHCCHHHCCCCCCCCCEEEEEHHHHHHHHEECCHHHHHHHH KTAAAWAAYYDDPESQNAQQRSEASVAFLERDPRSIMARVTAWSSILGQARDVETQRRAI HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELEAMGVIVRIDENGRPRFQVPPEILEAEKEAFQIEEN HHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA