| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077901
Identifier: 170077901
GI number: 170077901
Start: 1335137
End: 1335601
Strand: Reverse
Name: 170077901
Synonym: SYNPCC7002_A1286
Alternate gene names: NA
Gene position: 1335601-1335137 (Counterclockwise)
Preceding gene: 170077902
Following gene: 170077898
Centisome position: 44.4
GC content: 50.54
Gene sequence:
>465_bases ATGGTATTTCATAAATACTTCATCCATGGCTGTAGAGCGCTGGTGTTACTCGGATTAATCTGGTTTTGTCTGACCCCAGC GGCGATCGCCTTACCCGTTCCTGCCCAACAGCCCCTCCAGGAAATGCAGATCCATCTGGGTACAACCAGTGGCGCCCTAC GATTTGTCCCTGACCAGTTGGAATTTGTCGCTGGCCAACGCTACAAATTACTCCTCGATAATCCCAGCAATCAAAAACAC TACTTCACGGCCAAGGATTTTGCCGATACCAGTTGGACTCAAAAAGTCGAAGCGGGCAAGGTGGAAGTAAAAGGGGCGAT CCACGAACTCGAACTCAAGCCAGGGGCGATCGCCGAATGGATTTTGATTCCCCAAAAGACAGGCAAATTTGAACTGCATT GTTCTGTCCCTGGCCATGCCGCAGCGGGGATGGTTGGCACCATTCAAGTCATTGCTGATTCGTAA
Upstream 100 bases:
>100_bases TATCGAGTGGCTCGGCAGAATGCAGGGGGTGTTAGAGGAAGCCAGGGTATAACGGAACTATCAAAGAAAGCTAAATTTTC AAGCGCAATGGAGAAAATCA
Downstream 100 bases:
>100_bases AAAAAACTCCCTCAAATCAAGAGGGAGCTGTGGGGGATAGTTGTGGACAATTTTAAAAAAACTTAACTGAGCACCAGGGG CGATTTTAGACAGCTTCGAG
Product: blue-copper-protein-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MVFHKYFIHGCRALVLLGLIWFCLTPAAIALPVPAQQPLQEMQIHLGTTSGALRFVPDQLEFVAGQRYKLLLDNPSNQKH YFTAKDFADTSWTQKVEAGKVEVKGAIHELELKPGAIAEWILIPQKTGKFELHCSVPGHAAAGMVGTIQVIADS
Sequences:
>Translated_154_residues MVFHKYFIHGCRALVLLGLIWFCLTPAAIALPVPAQQPLQEMQIHLGTTSGALRFVPDQLEFVAGQRYKLLLDNPSNQKH YFTAKDFADTSWTQKVEAGKVEVKGAIHELELKPGAIAEWILIPQKTGKFELHCSVPGHAAAGMVGTIQVIADS >Mature_154_residues MVFHKYFIHGCRALVLLGLIWFCLTPAAIALPVPAQQPLQEMQIHLGTTSGALRFVPDQLEFVAGQRYKLLLDNPSNQKH YFTAKDFADTSWTQKVEAGKVEVKGAIHELELKPGAIAEWILIPQKTGKFELHCSVPGHAAAGMVGTIQVIADS
Specific function: Unknown
COG id: COG4454
COG function: function code P; Uncharacterized copper-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16932; Mature: 16932
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFHKYFIHGCRALVLLGLIWFCLTPAAIALPVPAQQPLQEMQIHLGTTSGALRFVPDQL CCCHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCHHHHHEEECCCCCCEEECCHHH EFVAGQRYKLLLDNPSNQKHYFTAKDFADTSWTQKVEAGKVEVKGAIHELELKPGAIAEW HHHCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHCCCEEEEEECEEEEECCCCCEEEE ILIPQKTGKFELHCSVPGHAAAGMVGTIQVIADS EEEECCCCCEEEEECCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MVFHKYFIHGCRALVLLGLIWFCLTPAAIALPVPAQQPLQEMQIHLGTTSGALRFVPDQL CCCHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCHHHHHEEECCCCCCEEECCHHH EFVAGQRYKLLLDNPSNQKHYFTAKDFADTSWTQKVEAGKVEVKGAIHELELKPGAIAEW HHHCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHCCCEEEEEECEEEEECCCCCEEEE ILIPQKTGKFELHCSVPGHAAAGMVGTIQVIADS EEEECCCCCEEEEECCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA