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The map label for this gene is 170077888

Identifier: 170077888

GI number: 170077888

Start: 1318770

End: 1320596

Strand: Reverse

Name: 170077888

Synonym: SYNPCC7002_A1273

Alternate gene names: NA

Gene position: 1320596-1318770 (Counterclockwise)

Preceding gene: 170077889

Following gene: 170077885

Centisome position: 43.9

GC content: 50.63

Gene sequence:

>1827_bases
ATGAACAAGAGCAAACCCCAACCCACAACCCGTAGAAGAACCCGCACCAGCCAAAAACAAACGACAAAGCCAGAAAATCT
CAACCCCCAGGACAGTATTAAAATTATTCCCCTGGGTGGTCTCCATGAAATTGGTAAAAACACCTGTGTTTTTGAGTATG
ACGATGAAATCGTGCTGCTCGATGCGGGCCTAGCCTTTCCGACGGATGGGATGCATGGGGTCAATATTGTTCTGCCAGAC
ACAACCTATCTCCGGGAAAACCGCCACAAAATTAAGGGGATGATTGTCACCCACGGCCACGAAGATCACATTGGTGGTAT
TTCCCATCACCTCAAGCAGTTTGATATTCCCGTCATCTATGGCCCCCGCCTAGCTATGTCTCTGTTGTCCGACAAACTAG
ATGAAGCAGGCGTAAGCGATCGCACCAAACTCCACAGCGTCATGCCACGGGACATGGTGCGTATTGGTAAAAATTTCCTC
GTAGAATACATCCGCAATACTCACTCCATTGCCGATAGCTTTACCGTGGCGATCCACACGCCCATTGGGGTGATCATTCA
CACAGGGGACTTCAAAGTAGACTTTACCCCTGTTGACGGTGAACAGTTTGATTTTCAGCGGCTCGCTGAGCATGGCGAAA
AAGGTGTTCTCTGTCTTTTAAGTGATTCGACGAACGCCGAAGTTCCCGGTCGCACCCCTTCGGAAGCCTCAGTGAAGCCG
AATTTAGACAGAATCTTTGGTCAGGCCCAAGGACGACTCTTTGTGACGACCTTTGCCTCTTCTGTCCACCGGGTCAGCAT
TATTTTAGAACTGGCGCAAAAACACAATCGTAAGGTGGCTGTGGTGGGCCGTTCCATGCTAAACGTCATTTCCCATGCCC
GCAATTTAGGCTACATGAAATGTTTGGATGAGCTGTTTATTCCCCTGCGGCAGCTGAAAAGCATGAAGGATGAGGATGTT
TTGATCCTGACAACGGGCTCCCAAGGTGAGACCTTATCGGCCATGACACGGATCTCCCACGATGCCCACCGCCACATCAA
AATTAAGGAAGGGGATACGGTGGTCTTTTCGGCCAATCCGATCCCTGGGAATACGATCGCCGTGGTCAATACCATTGATC
GTCTGATGATGCGCGGCGCGAAAGTCATCTACGGTAAAGGGGAAGGAATCCACGTTTCTGGTCACGGCGCCCAAGATGAT
CACAAGTTGATGTTGGCCTTGACGAAGCCGAAGTTCTTTATTCCGTTCCACGGGGAACACCGGATGTTGGTGAAGCACGC
CCAAACGGCCCAATCGATGGGGGTACCGGAAGAAAATATTGTGATTATCGATAACGGTGACATTGTGGAACTCACAGAAA
ATTCCATTGGTGTTACCGGGAAAGTGCCTTCGGGAATTGAATTAGTAGACCGTTCTGGTATTGTCCATGATTCGGTACTC
CAGGAACGGCAACAGTTGGCCGAGGAAGGGGTGATTACGGTGGCCGTGGCGATCGCCCAAGACGGTAATCTAATTGCGCC
ACCAGAAATTCATCTCCGGGGTGTGGTTACCGCAGCGAACAATAAGTTACTCCACCAGTTAATCCAGCGGAATGTCGAAA
ATGTGTTGGAAGACCGCCTCGCAGAGTACAAAGAACATGGCAAGCGCAGCAACGAAGACATTGACTGGACTGACATTCGC
CTAGAGATTGAAGCATCCCTACAACGCCTTGCCCGTCGAGAATTACAAGGGGAACCCCTCGTGGTCTTTTTGATGCAGGT
CAGCGAACAGACTGCCGTTAGAACCCAGCGCCGTCGTCGTCGTCCCACAGCATCCCTTGCTTCCTAA

Upstream 100 bases:

>100_bases
CGCTGGTCATATCTAGCCGTTGGTCTTCAAATACCAGCCTAAAAGTTTTCTATTTCAACCTTTTCTCTAGTTTTAACCAC
AAGCAAATCTAAGGAGTTTT

Downstream 100 bases:

>100_bases
TGTAGGAAAAGGATTTGGGATCTACTCTAAGTCTCTTGTAAGCATTTGAATTCAGAGAAATACACGAAAGGGAGCCATAA
TGACTCCCTTTTTTGTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MNKSKPQPTTRRRTRTSQKQTTKPENLNPQDSIKIIPLGGLHEIGKNTCVFEYDDEIVLLDAGLAFPTDGMHGVNIVLPD
TTYLRENRHKIKGMIVTHGHEDHIGGISHHLKQFDIPVIYGPRLAMSLLSDKLDEAGVSDRTKLHSVMPRDMVRIGKNFL
VEYIRNTHSIADSFTVAIHTPIGVIIHTGDFKVDFTPVDGEQFDFQRLAEHGEKGVLCLLSDSTNAEVPGRTPSEASVKP
NLDRIFGQAQGRLFVTTFASSVHRVSIILELAQKHNRKVAVVGRSMLNVISHARNLGYMKCLDELFIPLRQLKSMKDEDV
LILTTGSQGETLSAMTRISHDAHRHIKIKEGDTVVFSANPIPGNTIAVVNTIDRLMMRGAKVIYGKGEGIHVSGHGAQDD
HKLMLALTKPKFFIPFHGEHRMLVKHAQTAQSMGVPEENIVIIDNGDIVELTENSIGVTGKVPSGIELVDRSGIVHDSVL
QERQQLAEEGVITVAVAIAQDGNLIAPPEIHLRGVVTAANNKLLHQLIQRNVENVLEDRLAEYKEHGKRSNEDIDWTDIR
LEIEASLQRLARRELQGEPLVVFLMQVSEQTAVRTQRRRRRPTASLAS

Sequences:

>Translated_608_residues
MNKSKPQPTTRRRTRTSQKQTTKPENLNPQDSIKIIPLGGLHEIGKNTCVFEYDDEIVLLDAGLAFPTDGMHGVNIVLPD
TTYLRENRHKIKGMIVTHGHEDHIGGISHHLKQFDIPVIYGPRLAMSLLSDKLDEAGVSDRTKLHSVMPRDMVRIGKNFL
VEYIRNTHSIADSFTVAIHTPIGVIIHTGDFKVDFTPVDGEQFDFQRLAEHGEKGVLCLLSDSTNAEVPGRTPSEASVKP
NLDRIFGQAQGRLFVTTFASSVHRVSIILELAQKHNRKVAVVGRSMLNVISHARNLGYMKCLDELFIPLRQLKSMKDEDV
LILTTGSQGETLSAMTRISHDAHRHIKIKEGDTVVFSANPIPGNTIAVVNTIDRLMMRGAKVIYGKGEGIHVSGHGAQDD
HKLMLALTKPKFFIPFHGEHRMLVKHAQTAQSMGVPEENIVIIDNGDIVELTENSIGVTGKVPSGIELVDRSGIVHDSVL
QERQQLAEEGVITVAVAIAQDGNLIAPPEIHLRGVVTAANNKLLHQLIQRNVENVLEDRLAEYKEHGKRSNEDIDWTDIR
LEIEASLQRLARRELQGEPLVVFLMQVSEQTAVRTQRRRRRPTASLAS
>Mature_608_residues
MNKSKPQPTTRRRTRTSQKQTTKPENLNPQDSIKIIPLGGLHEIGKNTCVFEYDDEIVLLDAGLAFPTDGMHGVNIVLPD
TTYLRENRHKIKGMIVTHGHEDHIGGISHHLKQFDIPVIYGPRLAMSLLSDKLDEAGVSDRTKLHSVMPRDMVRIGKNFL
VEYIRNTHSIADSFTVAIHTPIGVIIHTGDFKVDFTPVDGEQFDFQRLAEHGEKGVLCLLSDSTNAEVPGRTPSEASVKP
NLDRIFGQAQGRLFVTTFASSVHRVSIILELAQKHNRKVAVVGRSMLNVISHARNLGYMKCLDELFIPLRQLKSMKDEDV
LILTTGSQGETLSAMTRISHDAHRHIKIKEGDTVVFSANPIPGNTIAVVNTIDRLMMRGAKVIYGKGEGIHVSGHGAQDD
HKLMLALTKPKFFIPFHGEHRMLVKHAQTAQSMGVPEENIVIIDNGDIVELTENSIGVTGKVPSGIELVDRSGIVHDSVL
QERQQLAEEGVITVAVAIAQDGNLIAPPEIHLRGVVTAANNKLLHQLIQRNVENVLEDRLAEYKEHGKRSNEDIDWTDIR
LEIEASLQRLARRELQGEPLVVFLMQVSEQTAVRTQRRRRRPTASLAS

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 67616; Mature: 67616

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS01292 UPF0036

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSKPQPTTRRRTRTSQKQTTKPENLNPQDSIKIIPLGGLHEIGKNTCVFEYDDEIVLL
CCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCEEEEECCCHHHHCCCCEEEEECCCEEEE
DAGLAFPTDGMHGVNIVLPDTTYLRENRHKIKGMIVTHGHEDHIGGISHHLKQFDIPVIY
ECCCCCCCCCCCCCEEEECCCHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEE
GPRLAMSLLSDKLDEAGVSDRTKLHSVMPRDMVRIGKNFLVEYIRNTHSIADSFTVAIHT
CHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
PIGVIIHTGDFKVDFTPVDGEQFDFQRLAEHGEKGVLCLLSDSTNAEVPGRTPSEASVKP
CEEEEEECCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
NLDRIFGQAQGRLFVTTFASSVHRVSIILELAQKHNRKVAVVGRSMLNVISHARNLGYMK
CHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCHHH
CLDELFIPLRQLKSMKDEDVLILTTGSQGETLSAMTRISHDAHRHIKIKEGDTVVFSANP
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCEEEEECCC
IPGNTIAVVNTIDRLMMRGAKVIYGKGEGIHVSGHGAQDDHKLMLALTKPKFFIPFHGEH
CCCCCEEHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCEEEEEEECCEEEEEECCCC
RMLVKHAQTAQSMGVPEENIVIIDNGDIVELTENSIGVTGKVPSGIELVDRSGIVHDSVL
HHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCCEECCCCCCCEEECCCCCCHHHHH
QERQQLAEEGVITVAVAIAQDGNLIAPPEIHLRGVVTAANNKLLHQLIQRNVENVLEDRL
HHHHHHHHCCEEEEEEEEECCCCEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
AEYKEHGKRSNEDIDWTDIRLEIEASLQRLARRELQGEPLVVFLMQVSEQTAVRTQRRRR
HHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHC
RPTASLAS
CCCCCCCC
>Mature Secondary Structure
MNKSKPQPTTRRRTRTSQKQTTKPENLNPQDSIKIIPLGGLHEIGKNTCVFEYDDEIVLL
CCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCEEEEECCCHHHHCCCCEEEEECCCEEEE
DAGLAFPTDGMHGVNIVLPDTTYLRENRHKIKGMIVTHGHEDHIGGISHHLKQFDIPVIY
ECCCCCCCCCCCCCEEEECCCHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEE
GPRLAMSLLSDKLDEAGVSDRTKLHSVMPRDMVRIGKNFLVEYIRNTHSIADSFTVAIHT
CHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
PIGVIIHTGDFKVDFTPVDGEQFDFQRLAEHGEKGVLCLLSDSTNAEVPGRTPSEASVKP
CEEEEEECCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
NLDRIFGQAQGRLFVTTFASSVHRVSIILELAQKHNRKVAVVGRSMLNVISHARNLGYMK
CHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCHHH
CLDELFIPLRQLKSMKDEDVLILTTGSQGETLSAMTRISHDAHRHIKIKEGDTVVFSANP
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCEEEEECCC
IPGNTIAVVNTIDRLMMRGAKVIYGKGEGIHVSGHGAQDDHKLMLALTKPKFFIPFHGEH
CCCCCEEHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCEEEEEEECCEEEEEECCCC
RMLVKHAQTAQSMGVPEENIVIIDNGDIVELTENSIGVTGKVPSGIELVDRSGIVHDSVL
HHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCCCEECCCCCCCEEECCCCCCHHHHH
QERQQLAEEGVITVAVAIAQDGNLIAPPEIHLRGVVTAANNKLLHQLIQRNVENVLEDRL
HHHHHHHHCCEEEEEEEEECCCCEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
AEYKEHGKRSNEDIDWTDIRLEIEASLQRLARRELQGEPLVVFLMQVSEQTAVRTQRRRR
HHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHC
RPTASLAS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]