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The map label for this gene is ruvA

Identifier: 170077885

GI number: 170077885

Start: 1315644

End: 1316273

Strand: Reverse

Name: ruvA

Synonym: SYNPCC7002_A1270

Alternate gene names: 170077885

Gene position: 1316273-1315644 (Counterclockwise)

Preceding gene: 170077888

Following gene: 170077882

Centisome position: 43.76

GC content: 54.44

Gene sequence:

>630_bases
ATGTTTAGTTATCTTAAGGGAGAGGCGATCGCCATCCACCGGAATTTGCAGGGGCGTTTTTTTCTAATTCTCGAAGTAAG
GGACATTGGCTACGAGATCCAAGTGCCAGGACGCCTCGCCCAGGAGTTGGCAGCCGCAATCGGCCAACCCCAACACATTT
TTGTCCACAGTCAGCAACGAGAGGACGGCACCTACCTCTACGGCTTTGCCAGCGCTGCCGCCCGGGATTTATTTCGGCAG
CTGATCAGTGTCAGTGGCATTGGTGCCCAGGGGGCGATCGCCCTACTTGATACTCTAACCTTGCCGGAATTGGTACAGGC
CATTGTCACCGCCGATCATCGTCAGCTAGCCAAAGCGCCGGGCATTGGCAAAAAAACCGCCGAACGGCTTGCCCTCGAAC
TGCGCAGCAAACTCAGCCAATGGCGAGATCAATTTTCGCTTCCCGACACAGCCGCTCAACCCAATGCCGCTGTCCACGAA
GATTTGGAATTAACCTTGTTGGCCTTGGGATACCAAGAAACCGAAATCCGTGGGGCGATCGCCACCCTCAGTCAAGACTC
GATTCTGTTGCAAAATGACAATGCCGACGAATGGATCCGGCGGGCCATCACTCTCCTAAGCCAAACATAA

Upstream 100 bases:

>100_bases
TAAACGTACTGATTGAAAATGAAAATAGCGATCGCCACTGGGACTTGCTGGAATGTCAGAGGCAATGGGAAGATCGCAGG
CATTAGGCAGAGGGGCTTTC

Downstream 100 bases:

>100_bases
CAAGACAAAAACCCCCTGCAATGAGGAGGCCCAGGCTTACCTGTTCAACAAAAAAACGCTACTGAATTTCCCGGACGCGG
GGTTGTCCGTCAATAATTTC

Product: Holliday junction DNA helicase RuvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MFSYLKGEAIAIHRNLQGRFFLILEVRDIGYEIQVPGRLAQELAAAIGQPQHIFVHSQQREDGTYLYGFASAAARDLFRQ
LISVSGIGAQGAIALLDTLTLPELVQAIVTADHRQLAKAPGIGKKTAERLALELRSKLSQWRDQFSLPDTAAQPNAAVHE
DLELTLLALGYQETEIRGAIATLSQDSILLQNDNADEWIRRAITLLSQT

Sequences:

>Translated_209_residues
MFSYLKGEAIAIHRNLQGRFFLILEVRDIGYEIQVPGRLAQELAAAIGQPQHIFVHSQQREDGTYLYGFASAAARDLFRQ
LISVSGIGAQGAIALLDTLTLPELVQAIVTADHRQLAKAPGIGKKTAERLALELRSKLSQWRDQFSLPDTAAQPNAAVHE
DLELTLLALGYQETEIRGAIATLSQDSILLQNDNADEWIRRAITLLSQT
>Mature_209_residues
MFSYLKGEAIAIHRNLQGRFFLILEVRDIGYEIQVPGRLAQELAAAIGQPQHIFVHSQQREDGTYLYGFASAAARDLFRQ
LISVSGIGAQGAIALLDTLTLPELVQAIVTADHRQLAKAPGIGKKTAERLALELRSKLSQWRDQFSLPDTAAQPNAAVHE
DLELTLLALGYQETEIRGAIATLSQDSILLQNDNADEWIRRAITLLSQT

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family

Homologues:

Organism=Escherichia coli, GI1788168, Length=190, Percent_Identity=31.0526315789474, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVA_SYNP2 (B1XL12)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734523.1
- ProteinModelPortal:   B1XL12
- SMR:   B1XL12
- GeneID:   6055620
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1270
- HOGENOM:   HBG635309
- OMA:   IATKEVK
- HAMAP:   MF_00031
- InterPro:   IPR011114
- InterPro:   IPR013849
- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000085
- InterPro:   IPR010994
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00278
- TIGRFAMs:   TIGR00084

Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N; SSF50249 Nucleic_acid_OB; SSF47781 RuvA_2_like

EC number: =3.6.4.12

Molecular weight: Translated: 23043; Mature: 23043

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSYLKGEAIAIHRNLQGRFFLILEVRDIGYEIQVPGRLAQELAAAIGQPQHIFVHSQQR
CCCCCCCCEEEEEECCCCEEEEEEEEECCCEEEECCHHHHHHHHHHHCCCCEEEEECCCC
EDGTYLYGFASAAARDLFRQLISVSGIGAQGAIALLDTLTLPELVQAIVTADHRQLAKAP
CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
GIGKKTAERLALELRSKLSQWRDQFSLPDTAAQPNAAVHEDLELTLLALGYQETEIRGAI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEEEECCCHHHHHHHH
ATLSQDSILLQNDNADEWIRRAITLLSQT
HHCCCCCEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSYLKGEAIAIHRNLQGRFFLILEVRDIGYEIQVPGRLAQELAAAIGQPQHIFVHSQQR
CCCCCCCCEEEEEECCCCEEEEEEEEECCCEEEECCHHHHHHHHHHHCCCCEEEEECCCC
EDGTYLYGFASAAARDLFRQLISVSGIGAQGAIALLDTLTLPELVQAIVTADHRQLAKAP
CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
GIGKKTAERLALELRSKLSQWRDQFSLPDTAAQPNAAVHEDLELTLLALGYQETEIRGAI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEEEECCCHHHHHHHH
ATLSQDSILLQNDNADEWIRRAITLLSQT
HHCCCCCEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA