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The map label for this gene is ydcP [H]

Identifier: 170077807

GI number: 170077807

Start: 1232753

End: 1235254

Strand: Direct

Name: ydcP [H]

Synonym: SYNPCC7002_A1190

Alternate gene names: 170077807

Gene position: 1232753-1235254 (Clockwise)

Preceding gene: 170077806

Following gene: 170077808

Centisome position: 40.98

GC content: 47.32

Gene sequence:

>2502_bases
ATGTCTACTCCCTCTGTTACCCCTGTAGAATCTAGCACCCTAATCAAAACCCCTGAACTGCTGGCTCCGGCGGGAAATTG
GGACTGTGCGATCACCGCCGTGGAGAATGGGGCTGATGCGATTTATTTTGGGCTGGATAAATTTAATGCCCGGATGCGAT
CACAAAACTTTGTCGAGTCAGATTTGCCGGAGTTGATGGCATACTTACATCGGCGCGGCGTGAAGGGCTATGTGACGTTA
AATACGCTGATTTTCACCTCGGAATTGGCGGCAGTCGAACAATATTTGCGGTCGATTATTGCGGCGGGAGTCGATGCGGC
GATCGTCCAGGATGTGGGGCTGTGCCAATTAATTTGGCAATTGTCGCCCGATTTTCCGATCCATGGTTCGACGCAAATGA
CCGTCACCAGCGCCGCAGGGGTCGAGTTCGCGCAAAACTTGGGTTGTGATTTGGTGGTATTGGCGCGGGAATGTTCGATC
AAGGAAATCAATAAAATCCAGCAGGAATTGGGTCAACAAAAGATCTCAATGCCGCTAGAAGTGTTTGTCCACGGGGCGTT
GTGCGTCGCCTATTCTGGGCAATGTTTAACCAGTGAATCCCTCGGCGGACGGTCGGCCAATCGCGGAGAATGCGCCCAAG
CCTGCCGGATGCCCTACGAAATGATTGTCGATGGTAGGCCATTTGATCTGAGCGACAGACGTTACCTACTAAGCCCCCAA
GATTTGGCGGGATTACCTGTTTTGCCGGACTTAATTAAAGCGGGTGTCGTGTCGCTAAAAATCGAAGGACGCTTAAAACA
ACCGGAATATGTGGCCAGTGTCACCCAAGTGTATCGCCAGGCCATTGATCGGGCGGTGCAGGGCATTGAGCAGGACATTT
CAGACCAGGAAAAATATCAATTGGAAATGGCCTTTTCGCGTGGGTTGTACACGGGTTGGCTCGACGGCATCGATAATCAA
AGCCTTGTTCATGGTCGCTTTGGCAAGAAAAGAGGCGTATTTCTTGGTGAAATCAAGCAAATTCGTGATGGTCGCGACAA
ACAAGTTATTTTGCACTTAGAAGCGCCCCTAAAGGCTGGGGATGGGGTGGTCTTTGATCAGGGGAAACCCGCAGATCGTG
AACAAGGGGGGCGAGTTTACGCCGTTGAAACCCAGGGAAAAGATACGATTGTTACTTTTGGGCGGCGGGATGTGGACTTG
CGCAGGGTGCGGGTTGGTGATCGCCTCTGGAAAACCAGCGATCCAGAACTGGATAAAAAATTGCGCCAAACCTTTACCAG
TGAAAAAATTCAGTTTCAGCGGCCCATTACGATAGAAATTCACGGAGAAATTGGTGAAAAATTGACGGCGATCGCCCGCG
ATGGGCAGGGCAATATTGTCCAGGTCAGATCGGAAATTCTTCTCGACACCGCAATCAAAAAACCCCTAACAACGGAACGT
TTAACGGAACAATTTGGCCGCTTAGGGAATACCCCTTTTTATCTCCAACATTTAGAAAATAATCTGCTTGGTGAGGCCAT
TCTTCCCGTGAGCGAACTAAATCGAATACGACGGGAAATAGTCAGTCAATTAGAAACTTTACGCGCTCAACCGAAGCGTT
GGCAACTGAATAGCAATGCCTCTTATCGAAGCTTATTGCCGACTGTCGAAAAAATAGCACCACAGGCAGCACAAATTATT
GTTTTAGTGCGTAATTTAGCGCAATTAAAAGCTGTTTTAAAGACTAATATCCAAACTATTTATTGTGAATTTGAAAATCC
GATTAACTACCGTGAAGCAGTTAAACTGGCGCAACAAACTGAACAGCAACCGGAAATTTGGGTGGCACCGCCCCGAATCA
CCAAACCTAAGGAACAGTACATTCTCAATCAAGTGCTGTCTAGTCAAGCAGATGGCTATTTGATTCGCAATTATGATCAG
CTCAAATTCTTTAAGAACGAACGGATTACCGCTGATTTTTCTTTAAATATTTCCAACCCAATTAGTGCCAATTATTTTAA
ACAAACTTTTCCCCTAGAACGTCTCACGGCCTCCTATGACCTCAATATTCACCAGTTAGAATCACTCCTTAAAAAAGCAC
CACCCCACTGGTTTGAAATCACGATCCACCAACATATGCCGATGTTTCACATGGAGCATTGTGTTTTCTGCGCGTTTCTC
TCCGATGGCACTGACTTTACGAATTGTGGTCGCCCCTGCGAAAGCCATGAAGTGAAATTAGGCGATCGCACGGGTATTGA
GCATGTTTTAGTTGCCGATGCGGGCTGTCGGAATACGGTGTTTAATGGCACCGCCCAAACTGGCGCAGAATATATGCAAC
ATTTTATAGATTTGGGAGTGCAGCACTTCCGCGTTGAATTTGTGGACGAATCTCCCGCAGAGATTACCAAAACCGTTGAT
CTTTACCAAAAATTACTCACAGGAAAAATTTCTGGGGCACAGCTTTGGCAAACCCTCAAGCTCCAAAATCAATTAGGGGT
GACCCGTGGTTCGCTAGAATAA

Upstream 100 bases:

>100_bases
ATCTCACTGTTGATAATCAATTATCTGCATTGTGTGAGTGGCTAATAACGCAATAACTTTACAAAATCAAACCCGATCGC
CTCTCTATTTTGATAAATCT

Downstream 100 bases:

>100_bases
AAAGGCGATCGCCCTGCTTCATTCAATAAAAAAACTGTCACAGATCAGCGTCAGTAATGGGCTGCACCAAAATTATGGGT
CGTTAAGTAGACTTATCGTA

Product: U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 833; Mature: 832

Protein sequence:

>833_residues
MSTPSVTPVESSTLIKTPELLAPAGNWDCAITAVENGADAIYFGLDKFNARMRSQNFVESDLPELMAYLHRRGVKGYVTL
NTLIFTSELAAVEQYLRSIIAAGVDAAIVQDVGLCQLIWQLSPDFPIHGSTQMTVTSAAGVEFAQNLGCDLVVLARECSI
KEINKIQQELGQQKISMPLEVFVHGALCVAYSGQCLTSESLGGRSANRGECAQACRMPYEMIVDGRPFDLSDRRYLLSPQ
DLAGLPVLPDLIKAGVVSLKIEGRLKQPEYVASVTQVYRQAIDRAVQGIEQDISDQEKYQLEMAFSRGLYTGWLDGIDNQ
SLVHGRFGKKRGVFLGEIKQIRDGRDKQVILHLEAPLKAGDGVVFDQGKPADREQGGRVYAVETQGKDTIVTFGRRDVDL
RRVRVGDRLWKTSDPELDKKLRQTFTSEKIQFQRPITIEIHGEIGEKLTAIARDGQGNIVQVRSEILLDTAIKKPLTTER
LTEQFGRLGNTPFYLQHLENNLLGEAILPVSELNRIRREIVSQLETLRAQPKRWQLNSNASYRSLLPTVEKIAPQAAQII
VLVRNLAQLKAVLKTNIQTIYCEFENPINYREAVKLAQQTEQQPEIWVAPPRITKPKEQYILNQVLSSQADGYLIRNYDQ
LKFFKNERITADFSLNISNPISANYFKQTFPLERLTASYDLNIHQLESLLKKAPPHWFEITIHQHMPMFHMEHCVFCAFL
SDGTDFTNCGRPCESHEVKLGDRTGIEHVLVADAGCRNTVFNGTAQTGAEYMQHFIDLGVQHFRVEFVDESPAEITKTVD
LYQKLLTGKISGAQLWQTLKLQNQLGVTRGSLE

Sequences:

>Translated_833_residues
MSTPSVTPVESSTLIKTPELLAPAGNWDCAITAVENGADAIYFGLDKFNARMRSQNFVESDLPELMAYLHRRGVKGYVTL
NTLIFTSELAAVEQYLRSIIAAGVDAAIVQDVGLCQLIWQLSPDFPIHGSTQMTVTSAAGVEFAQNLGCDLVVLARECSI
KEINKIQQELGQQKISMPLEVFVHGALCVAYSGQCLTSESLGGRSANRGECAQACRMPYEMIVDGRPFDLSDRRYLLSPQ
DLAGLPVLPDLIKAGVVSLKIEGRLKQPEYVASVTQVYRQAIDRAVQGIEQDISDQEKYQLEMAFSRGLYTGWLDGIDNQ
SLVHGRFGKKRGVFLGEIKQIRDGRDKQVILHLEAPLKAGDGVVFDQGKPADREQGGRVYAVETQGKDTIVTFGRRDVDL
RRVRVGDRLWKTSDPELDKKLRQTFTSEKIQFQRPITIEIHGEIGEKLTAIARDGQGNIVQVRSEILLDTAIKKPLTTER
LTEQFGRLGNTPFYLQHLENNLLGEAILPVSELNRIRREIVSQLETLRAQPKRWQLNSNASYRSLLPTVEKIAPQAAQII
VLVRNLAQLKAVLKTNIQTIYCEFENPINYREAVKLAQQTEQQPEIWVAPPRITKPKEQYILNQVLSSQADGYLIRNYDQ
LKFFKNERITADFSLNISNPISANYFKQTFPLERLTASYDLNIHQLESLLKKAPPHWFEITIHQHMPMFHMEHCVFCAFL
SDGTDFTNCGRPCESHEVKLGDRTGIEHVLVADAGCRNTVFNGTAQTGAEYMQHFIDLGVQHFRVEFVDESPAEITKTVD
LYQKLLTGKISGAQLWQTLKLQNQLGVTRGSLE
>Mature_832_residues
STPSVTPVESSTLIKTPELLAPAGNWDCAITAVENGADAIYFGLDKFNARMRSQNFVESDLPELMAYLHRRGVKGYVTLN
TLIFTSELAAVEQYLRSIIAAGVDAAIVQDVGLCQLIWQLSPDFPIHGSTQMTVTSAAGVEFAQNLGCDLVVLARECSIK
EINKIQQELGQQKISMPLEVFVHGALCVAYSGQCLTSESLGGRSANRGECAQACRMPYEMIVDGRPFDLSDRRYLLSPQD
LAGLPVLPDLIKAGVVSLKIEGRLKQPEYVASVTQVYRQAIDRAVQGIEQDISDQEKYQLEMAFSRGLYTGWLDGIDNQS
LVHGRFGKKRGVFLGEIKQIRDGRDKQVILHLEAPLKAGDGVVFDQGKPADREQGGRVYAVETQGKDTIVTFGRRDVDLR
RVRVGDRLWKTSDPELDKKLRQTFTSEKIQFQRPITIEIHGEIGEKLTAIARDGQGNIVQVRSEILLDTAIKKPLTTERL
TEQFGRLGNTPFYLQHLENNLLGEAILPVSELNRIRREIVSQLETLRAQPKRWQLNSNASYRSLLPTVEKIAPQAAQIIV
LVRNLAQLKAVLKTNIQTIYCEFENPINYREAVKLAQQTEQQPEIWVAPPRITKPKEQYILNQVLSSQADGYLIRNYDQL
KFFKNERITADFSLNISNPISANYFKQTFPLERLTASYDLNIHQLESLLKKAPPHWFEITIHQHMPMFHMEHCVFCAFLS
DGTDFTNCGRPCESHEVKLGDRTGIEHVLVADAGCRNTVFNGTAQTGAEYMQHFIDLGVQHFRVEFVDESPAEITKTVDL
YQKLLTGKISGAQLWQTLKLQNQLGVTRGSLE

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=521, Percent_Identity=33.0134357005758, Blast_Score=218, Evalue=1e-57,
Organism=Escherichia coli, GI1788397, Length=375, Percent_Identity=33.8666666666667, Blast_Score=162, Evalue=7e-41,
Organism=Escherichia coli, GI1789548, Length=299, Percent_Identity=32.7759197324415, Blast_Score=135, Evalue=8e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020988
- InterPro:   IPR001539 [H]

Pfam domain/function: PF12392 DUF3656; PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 93532; Mature: 93401

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPSVTPVESSTLIKTPELLAPAGNWDCAITAVENGADAIYFGLDKFNARMRSQNFVES
CCCCCCCCCCCCCEECCCHHHCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHCCCHHH
DLPELMAYLHRRGVKGYVTLNTLIFTSELAAVEQYLRSIIAAGVDAAIVQDVGLCQLIWQ
HHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LSPDFPIHGSTQMTVTSAAGVEFAQNLGCDLVVLARECSIKEINKIQQELGQQKISMPLE
CCCCCCCCCCCEEEEEECCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHH
VFVHGALCVAYSGQCLTSESLGGRSANRGECAQACRMPYEMIVDGRPFDLSDRRYLLSPQ
HHHHHHHEEEECCCEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEECCC
DLAGLPVLPDLIKAGVVSLKIEGRLKQPEYVASVTQVYRQAIDRAVQGIEQDISDQEKYQ
CCCCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LEMAFSRGLYTGWLDGIDNQSLVHGRFGKKRGVFLGEIKQIRDGRDKQVILHLEAPLKAG
HHHHHHCCCHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCC
DGVVFDQGKPADREQGGRVYAVETQGKDTIVTFGRRDVDLRRVRVGDRLWKTSDPELDKK
CCEEECCCCCCCHHCCCEEEEEECCCCCEEEEECCCCCCHHHHHHCCHHCCCCCHHHHHH
LRQTFTSEKIQFQRPITIEIHGEIGEKLTAIARDGQGNIVQVRSEILLDTAIKKPLTTER
HHHHHHHCCEEECCCEEEEECCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCHHH
LTEQFGRLGNTPFYLQHLENNLLGEAILPVSELNRIRREIVSQLETLRAQPKRWQLNSNA
HHHHHHCCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
SYRSLLPTVEKIAPQAAQIIVLVRNLAQLKAVLKTNIQTIYCEFENPINYREAVKLAQQT
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHC
EQQPEIWVAPPRITKPKEQYILNQVLSSQADGYLIRNYDQLKFFKNERITADFSLNISNP
CCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCEEEEEEEECCCC
ISANYFKQTFPLERLTASYDLNIHQLESLLKKAPPHWFEITIHQHMPMFHMEHCVFCAFL
CCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHEEEE
SDGTDFTNCGRPCESHEVKLGDRTGIEHVLVADAGCRNTVFNGTAQTGAEYMQHFIDLGV
CCCCCCHHCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCH
QHFRVEFVDESPAEITKTVDLYQKLLTGKISGAQLWQTLKLQNQLGVTRGSLE
HHEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
STPSVTPVESSTLIKTPELLAPAGNWDCAITAVENGADAIYFGLDKFNARMRSQNFVES
CCCCCCCCCCCCEECCCHHHCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHCCCHHH
DLPELMAYLHRRGVKGYVTLNTLIFTSELAAVEQYLRSIIAAGVDAAIVQDVGLCQLIWQ
HHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LSPDFPIHGSTQMTVTSAAGVEFAQNLGCDLVVLARECSIKEINKIQQELGQQKISMPLE
CCCCCCCCCCCEEEEEECCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHH
VFVHGALCVAYSGQCLTSESLGGRSANRGECAQACRMPYEMIVDGRPFDLSDRRYLLSPQ
HHHHHHHEEEECCCEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCEEEECCC
DLAGLPVLPDLIKAGVVSLKIEGRLKQPEYVASVTQVYRQAIDRAVQGIEQDISDQEKYQ
CCCCCCCCHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LEMAFSRGLYTGWLDGIDNQSLVHGRFGKKRGVFLGEIKQIRDGRDKQVILHLEAPLKAG
HHHHHHCCCHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCC
DGVVFDQGKPADREQGGRVYAVETQGKDTIVTFGRRDVDLRRVRVGDRLWKTSDPELDKK
CCEEECCCCCCCHHCCCEEEEEECCCCCEEEEECCCCCCHHHHHHCCHHCCCCCHHHHHH
LRQTFTSEKIQFQRPITIEIHGEIGEKLTAIARDGQGNIVQVRSEILLDTAIKKPLTTER
HHHHHHHCCEEECCCEEEEECCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCHHH
LTEQFGRLGNTPFYLQHLENNLLGEAILPVSELNRIRREIVSQLETLRAQPKRWQLNSNA
HHHHHHCCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
SYRSLLPTVEKIAPQAAQIIVLVRNLAQLKAVLKTNIQTIYCEFENPINYREAVKLAQQT
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHC
EQQPEIWVAPPRITKPKEQYILNQVLSSQADGYLIRNYDQLKFFKNERITADFSLNISNP
CCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCEEEEEEEECCCC
ISANYFKQTFPLERLTASYDLNIHQLESLLKKAPPHWFEITIHQHMPMFHMEHCVFCAFL
CCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHEEEE
SDGTDFTNCGRPCESHEVKLGDRTGIEHVLVADAGCRNTVFNGTAQTGAEYMQHFIDLGV
CCCCCCHHCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCH
QHFRVEFVDESPAEITKTVDLYQKLLTGKISGAQLWQTLKLQNQLGVTRGSLE
HHEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]