| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077808
Identifier: 170077808
GI number: 170077808
Start: 1235410
End: 1236477
Strand: Direct
Name: 170077808
Synonym: SYNPCC7002_A1191
Alternate gene names: NA
Gene position: 1235410-1236477 (Clockwise)
Preceding gene: 170077807
Following gene: 170077810
Centisome position: 41.07
GC content: 51.4
Gene sequence:
>1068_bases ATGACTTTACCCTTTAATGCGGCCCCCACCGAAGCACGGGTTAAACAATTTTGGCAACTCGCCGCCAGTTTTGGGATGGA GCGTAATGCCTACCATAATTACCTTAATGAAATCGTCAGCGATCGCTATGCCCTGATCAGCGGCCTCCAGATTTTGCGGG ATGAATTGCAATTTGTTGCCTCCGATTCAACGGATATTAAAGCTTGTGGGGCCGATATGAGTTTGCCCAGTGTGGTGACG ACCCTCGCCTACACCAACTGCGGCGATCGCATTCACCAGGGGGAAGCCACAAAACGTTATCGAGATGTCGTTGCCTCCCG TTTTGCCACCCTCTCGGAAATTGGCGAATTAAAATTAGAGGCCTTTTTCCCGGCAGGCGGAGGCACCGATGACGGCGAAA CCTTAGCTCATGTGACCGTAGCCCACGAGCTAGATGAATCTTTAAAGCGGCGTGTGTACGCAGGCAATCCCCAGTCCATT TCCCTCGTGGCCATTGATCTCAAAACCCATGTGGGCCGACTGCGTCAGGATGGCAAACAGGTTTATGGCAAAACCCGTGA ATCGCCGTGGCGCGAACCCCGCAACGCCTGTGGTGCAATTGTCGGTACTTTGAAAAATTACAACGCCCATAATCCGATCC ATCGCCGCATTCGCAATGATTTAGGGGAAGAAAATTTCCATTTTTTAGCCCACAATGCCGTCCTGACGGATACAAAAAAA ATTGACATTACGATGGCGGTGGCGGCCAATATTGTGGCGATTCGCGGCATTCGTAATACAGCGGTGGCGATCGCCCAAGA ATTAGACGAACGGGGTTTAGCACACCTCACCGCTAGCACCACGGTCAATCGCCCTTCCCGCGACGATTTGGTGATTTATC TCGCCCGGGCCACGGTCTTTAACGGCAGCATCAAAATCCAAAGTATCGGTACCGATGCCCGTTTATATGGCGGCAAAATC GTTGAATATGCGGGCGAAAAACGCCTCCAATTGCATTACGCCGACTGGAATTTAGACAATCTCCCCATCGAAGAAATCCC CTATCAAGTCCGCTCTTCGGGATTGTGA
Upstream 100 bases:
>100_bases AATGGGCTGCACCAAAATTATGGGTCGTTAAGTAGACTTATCGTAGTCGCCAAGCCTAAGACGCCACAACACATCACATC AACGTTCCAGATAAACTTCT
Downstream 100 bases:
>100_bases ACTATACGCAATTGTCCAGAATGACATCCCGTAAGCCTTCTAGGGTGTAGACCTCGGCTTCGAGATCAACCCGCTGGAAA AGGTTTAAACAAGTCTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTLPFNAAPTEARVKQFWQLAASFGMERNAYHNYLNEIVSDRYALISGLQILRDELQFVASDSTDIKACGADMSLPSVVT TLAYTNCGDRIHQGEATKRYRDVVASRFATLSEIGELKLEAFFPAGGGTDDGETLAHVTVAHELDESLKRRVYAGNPQSI SLVAIDLKTHVGRLRQDGKQVYGKTRESPWREPRNACGAIVGTLKNYNAHNPIHRRIRNDLGEENFHFLAHNAVLTDTKK IDITMAVAANIVAIRGIRNTAVAIAQELDERGLAHLTASTTVNRPSRDDLVIYLARATVFNGSIKIQSIGTDARLYGGKI VEYAGEKRLQLHYADWNLDNLPIEEIPYQVRSSGL
Sequences:
>Translated_355_residues MTLPFNAAPTEARVKQFWQLAASFGMERNAYHNYLNEIVSDRYALISGLQILRDELQFVASDSTDIKACGADMSLPSVVT TLAYTNCGDRIHQGEATKRYRDVVASRFATLSEIGELKLEAFFPAGGGTDDGETLAHVTVAHELDESLKRRVYAGNPQSI SLVAIDLKTHVGRLRQDGKQVYGKTRESPWREPRNACGAIVGTLKNYNAHNPIHRRIRNDLGEENFHFLAHNAVLTDTKK IDITMAVAANIVAIRGIRNTAVAIAQELDERGLAHLTASTTVNRPSRDDLVIYLARATVFNGSIKIQSIGTDARLYGGKI VEYAGEKRLQLHYADWNLDNLPIEEIPYQVRSSGL >Mature_354_residues TLPFNAAPTEARVKQFWQLAASFGMERNAYHNYLNEIVSDRYALISGLQILRDELQFVASDSTDIKACGADMSLPSVVTT LAYTNCGDRIHQGEATKRYRDVVASRFATLSEIGELKLEAFFPAGGGTDDGETLAHVTVAHELDESLKRRVYAGNPQSIS LVAIDLKTHVGRLRQDGKQVYGKTRESPWREPRNACGAIVGTLKNYNAHNPIHRRIRNDLGEENFHFLAHNAVLTDTKKI DITMAVAANIVAIRGIRNTAVAIAQELDERGLAHLTASTTVNRPSRDDLVIYLARATVFNGSIKIQSIGTDARLYGGKIV EYAGEKRLQLHYADWNLDNLPIEEIPYQVRSSGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39335; Mature: 39204
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPFNAAPTEARVKQFWQLAASFGMERNAYHNYLNEIVSDRYALISGLQILRDELQFVA CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDSTDIKACGADMSLPSVVTTLAYTNCGDRIHQGEATKRYRDVVASRFATLSEIGELKLE CCCCCCEECCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCEEEE AFFPAGGGTDDGETLAHVTVAHELDESLKRRVYAGNPQSISLVAIDLKTHVGRLRQDGKQ EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEHHHHHHHHHHHHHH VYGKTRESPWREPRNACGAIVGTLKNYNAHNPIHRRIRNDLGEENFHFLAHNAVLTDTKK HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECEEEECCCE IDITMAVAANIVAIRGIRNTAVAIAQELDERGLAHLTASTTVNRPSRDDLVIYLARATVF EEEEHHHHHCCHHEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEHEEE NGSIKIQSIGTDARLYGGKIVEYAGEKRLQLHYADWNLDNLPIEEIPYQVRSSGL CCEEEEEEECCCCHHHCCCCEEECCCCEEEEEEECCCCCCCCHHHCCHHHHCCCC >Mature Secondary Structure TLPFNAAPTEARVKQFWQLAASFGMERNAYHNYLNEIVSDRYALISGLQILRDELQFVA CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDSTDIKACGADMSLPSVVTTLAYTNCGDRIHQGEATKRYRDVVASRFATLSEIGELKLE CCCCCCEECCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCEEEE AFFPAGGGTDDGETLAHVTVAHELDESLKRRVYAGNPQSISLVAIDLKTHVGRLRQDGKQ EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEHHHHHHHHHHHHHH VYGKTRESPWREPRNACGAIVGTLKNYNAHNPIHRRIRNDLGEENFHFLAHNAVLTDTKK HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECEEEECCCE IDITMAVAANIVAIRGIRNTAVAIAQELDERGLAHLTASTTVNRPSRDDLVIYLARATVF EEEEHHHHHCCHHEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEHEEE NGSIKIQSIGTDARLYGGKIVEYAGEKRLQLHYADWNLDNLPIEEIPYQVRSSGL CCEEEEEEECCCCHHHCCCCEEECCCCEEEEEEECCCCCCCCHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA