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The map label for this gene is rpmH

Identifier: 170077609

GI number: 170077609

Start: 1016169

End: 1016306

Strand: Direct

Name: rpmH

Synonym: SYNPCC7002_A0988

Alternate gene names: 170077609

Gene position: 1016169-1016306 (Clockwise)

Preceding gene: 170077608

Following gene: 170077610

Centisome position: 33.78

GC content: 54.35

Gene sequence:

>138_bases
ATGACTAAACGGACCCTAGGCGGCACCGTCCGCAAGCAAAAACGTACTTCTGGTTTTCGGGCTCGTATGCGCAGCCACAC
TGGCCAGAATGTTATCCGCGCCCGCAGAAAAAAAGGCCGTCATCGCCTTACTGTCTAA

Upstream 100 bases:

>100_bases
ACGGTATAATTAGAGACTGTCATTTTCTAATTTTTTCGGCAAGGCGGCGATCGCCTCCGGAGAGAGCACCTATTTTCAAA
GGAATATAAGGAGGACTTCC

Downstream 100 bases:

>100_bases
TCCAGCGCGCAAACCATTATTTTGGTGAGGGGACTTGCCGTCTACCTCACTCTCATTTTCTTTGTGGGACTGCCAAAAGA
ACACCGTCTAAAACACTGGC

Product: 50S ribosomal protein L34

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 45; Mature: 44

Protein sequence:

>45_residues
MTKRTLGGTVRKQKRTSGFRARMRSHTGQNVIRARRKKGRHRLTV

Sequences:

>Translated_45_residues
MTKRTLGGTVRKQKRTSGFRARMRSHTGQNVIRARRKKGRHRLTV
>Mature_44_residues
TKRTLGGTVRKQKRTSGFRARMRSHTGQNVIRARRKKGRHRLTV

Specific function: Unknown

COG id: COG0230

COG function: function code J; Ribosomal protein L34

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_SYNP2 (B1XJD1)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734247.1
- ProteinModelPortal:   B1XJD1
- SMR:   B1XJD1
- GeneID:   6057313
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0988
- HOGENOM:   HBG729750
- ProtClustDB:   PRK00399
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00391
- InterPro:   IPR000271
- ProDom:   PD003101
- TIGRFAMs:   TIGR01030

Pfam domain/function: PF00468 Ribosomal_L34

EC number: NA

Molecular weight: Translated: 5276; Mature: 5145

Theoretical pI: Translated: 13.51; Mature: 13.51

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRTLGGTVRKQKRTSGFRARMRSHTGQNVIRARRKKGRHRLTV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKRTLGGTVRKQKRTSGFRARMRSHTGQNVIRARRKKGRHRLTV
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA