Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077608

Identifier: 170077608

GI number: 170077608

Start: 1015205

End: 1015984

Strand: Direct

Name: 170077608

Synonym: SYNPCC7002_A0987

Alternate gene names: NA

Gene position: 1015205-1015984 (Clockwise)

Preceding gene: 170077603

Following gene: 170077609

Centisome position: 33.75

GC content: 54.1

Gene sequence:

>780_bases
ATGCAACTCTTCCGTTCTCCCCTTTCCCGTTTGGCGATCGCCACCACCCTGTTAAGCAGTAGCCTGACTTTCATGCCCCA
AATGGCTGAAGCCCGCCAACCCTGTGGGTCTTTTACGATCAACTGGGGGGGGACGATTCCCCAAGGGGACATTCTCAAGT
GTGCCGTTGAATATAATTCCGGTGCCCGCCGCCGCGATCGCTACTACTTAGAAATCAAAAAAAGTAAAATTGTTGACCGC
TTCCAGACTTTTGAACTGAGCTTCCCGGAAGACTTTGACGGTCGGGTCGATGACGCAAAAATTCGGGTCCGAGTCAATGG
CCGAGAAGTTGCCCTCAACGAAGCCGCTACCGCCTGGGATCCCGATAGCTTACCCACCGATCCAGCCCAACAGAGCCAAA
CCATCCTCGGTAACATTGCCGCCAGTACAACCACACCGGATCGTGGGGGCGAATTAGTCCTGGTCAACGGCGAATTGGTG
TTCCTCGATTCAGAAACCCTCGCCGCCCAACAAGCCAGCCAAAGTAACAACACCAACAACAATAATCCTGCTCCGGAACC
AGAGATTGCCGAAGAGCCAGAAGATGAAGGCCCCCGTAGTCGTTCCCTGGTGATTACCCTCGCTGAACCCCTCAGCCCCG
AAAGCGACGTTGAGATCATCCTCGATAGTGTCAACAATCCTTCTCGGGGGGGAATGTATTTGATAACGGCCTTTGCCCGT
AGCCAAGGGGCGCCTCTCCCCAGCCGTTTGGGCTCTTGGTTATTGGATGTGGATTTTTAG

Upstream 100 bases:

>100_bases
TGTTGCGTTGGCACTTCTTCGTCAGGATTTCGTCAGGGGAGTTGCTGAAAACGCAAACTTTAGTCACAATCGGTTACAGA
CTTTGAAGGCGCCTGTGAAT

Downstream 100 bases:

>100_bases
GGATTGCCAGTTTCTTTATTTCCTGGGTACTGACCGGGGTAAATGCGATCAATTTCGCCGGAGCCCTTGGTTAACTTGAC
GGACACGGTATAATTAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQLFRSPLSRLAIATTLLSSSLTFMPQMAEARQPCGSFTINWGGTIPQGDILKCAVEYNSGARRRDRYYLEIKKSKIVDR
FQTFELSFPEDFDGRVDDAKIRVRVNGREVALNEAATAWDPDSLPTDPAQQSQTILGNIAASTTTPDRGGELVLVNGELV
FLDSETLAAQQASQSNNTNNNNPAPEPEIAEEPEDEGPRSRSLVITLAEPLSPESDVEIILDSVNNPSRGGMYLITAFAR
SQGAPLPSRLGSWLLDVDF

Sequences:

>Translated_259_residues
MQLFRSPLSRLAIATTLLSSSLTFMPQMAEARQPCGSFTINWGGTIPQGDILKCAVEYNSGARRRDRYYLEIKKSKIVDR
FQTFELSFPEDFDGRVDDAKIRVRVNGREVALNEAATAWDPDSLPTDPAQQSQTILGNIAASTTTPDRGGELVLVNGELV
FLDSETLAAQQASQSNNTNNNNPAPEPEIAEEPEDEGPRSRSLVITLAEPLSPESDVEIILDSVNNPSRGGMYLITAFAR
SQGAPLPSRLGSWLLDVDF
>Mature_259_residues
MQLFRSPLSRLAIATTLLSSSLTFMPQMAEARQPCGSFTINWGGTIPQGDILKCAVEYNSGARRRDRYYLEIKKSKIVDR
FQTFELSFPEDFDGRVDDAKIRVRVNGREVALNEAATAWDPDSLPTDPAQQSQTILGNIAASTTTPDRGGELVLVNGELV
FLDSETLAAQQASQSNNTNNNNPAPEPEIAEEPEDEGPRSRSLVITLAEPLSPESDVEIILDSVNNPSRGGMYLITAFAR
SQGAPLPSRLGSWLLDVDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28345; Mature: 28345

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLFRSPLSRLAIATTLLSSSLTFMPQMAEARQPCGSFTINWGGTIPQGDILKCAVEYNS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCC
GARRRDRYYLEIKKSKIVDRFQTFELSFPEDFDGRVDDAKIRVRVNGREVALNEAATAWD
CCCCCCEEEEEEEHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCC
PDSLPTDPAQQSQTILGNIAASTTTPDRGGELVLVNGELVFLDSETLAAQQASQSNNTNN
CCCCCCCCCHHHHHHHHEEEECCCCCCCCCEEEEECCEEEEEECHHHHHHHHHCCCCCCC
NNPAPEPEIAEEPEDEGPRSRSLVITLAEPLSPESDVEIILDSVNNPSRGGMYLITAFAR
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEEC
SQGAPLPSRLGSWLLDVDF
CCCCCCHHHHCCEEEEECC
>Mature Secondary Structure
MQLFRSPLSRLAIATTLLSSSLTFMPQMAEARQPCGSFTINWGGTIPQGDILKCAVEYNS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCC
GARRRDRYYLEIKKSKIVDRFQTFELSFPEDFDGRVDDAKIRVRVNGREVALNEAATAWD
CCCCCCEEEEEEEHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCC
PDSLPTDPAQQSQTILGNIAASTTTPDRGGELVLVNGELVFLDSETLAAQQASQSNNTNN
CCCCCCCCCHHHHHHHHEEEECCCCCCCCCEEEEECCEEEEEECHHHHHHHHHCCCCCCC
NNPAPEPEIAEEPEDEGPRSRSLVITLAEPLSPESDVEIILDSVNNPSRGGMYLITAFAR
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEEC
SQGAPLPSRLGSWLLDVDF
CCCCCCHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA