| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is psbT
Identifier: 170077578
GI number: 170077578
Start: 987179
End: 987274
Strand: Reverse
Name: psbT
Synonym: SYNPCC7002_A0957
Alternate gene names: NA
Gene position: 987274-987179 (Counterclockwise)
Preceding gene: 170077580
Following gene: 170077577
Centisome position: 32.82
GC content: 46.88
Gene sequence:
>96_bases ATGGATAGTGTTGCTTACATTATTGTGCTAGCGATGGCGTTATCGGTTCTCTTTTTCGCGATCGCCTTCCGCGAACCCCC CCGTATCGAAAAATAA
Upstream 100 bases:
>100_bases AACTTAAAATCTCAATTATCAACAAAACCCCAACTGAGGATCCGAACAAAAAAATGTTAAAGTGAAGCAAAAGTTCAAAA CCCAAGGATTTTTTAAAAAC
Downstream 100 bases:
>100_bases ACTTTGATTTTCTCATACCAACCTTTGAAGATCATCCCTGAACTAAAGCGAAAAGTTTGTCTTTTGGGGCAGATTTTTTC TTGGTTCAGGCTTTCTCCAT
Product: photosystem II reaction center protein T
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 31; Mature: 31
Protein sequence:
>31_residues MDSVAYIIVLAMALSVLFFAIAFREPPRIEK
Sequences:
>Translated_31_residues MDSVAYIIVLAMALSVLFFAIAFREPPRIEK >Mature_31_residues MDSVAYIIVLAMALSVLFFAIAFREPPRIEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3512; Mature: 3512
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSVAYIIVLAMALSVLFFAIAFREPPRIEK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDSVAYIIVLAMALSVLFFAIAFREPPRIEK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA