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The map label for this gene is nrdR

Identifier: 170077577

GI number: 170077577

Start: 986451

End: 986996

Strand: Reverse

Name: nrdR

Synonym: SYNPCC7002_A0956

Alternate gene names: 170077577

Gene position: 986996-986451 (Counterclockwise)

Preceding gene: 170077578

Following gene: 170077576

Centisome position: 32.81

GC content: 49.82

Gene sequence:

>546_bases
ATGCAATGCCCCTATTGTCAACATACTGATAGTCGCGTTTTAGAGTCAAGATCCACTGGCGCTGGACGAAGTATTCGTCG
TCGTCGGGAATGCCTCAGTTGCAAACACCGTTTCACCACCTACGAGCGGATCGAATTTGTGCCCATCTCTGTGATCAAGC
GCAATGGTCAAAGTGAAGCCTTTGATCGCTCTAAAATTTTGCGGGGTATGGTGCGGGCTTGCGAAAAAACAACTGTTTTA
CCCTCGACCCTAGAGGCGATCGCCGAAGAAATCGAAGCCCAACTCCAACAGAAACCCAAGCGCAGCATTACCACAGCCCA
AATTGGGGATTTGGTATTGCATCGGCTCCGCCAAGAAAGTGAAGTCGCTTACGTGCGTTTTGCTTCCGTGTACCGTCAGT
TCCAAGGAGTCGATGACTTTATCGAAACCCTCAGTCATCTCCAGGACAACGCCGAGCAAGCCAACCTCTGGATTCAAACC
CTCAATGAAGACGAAGAATCAGAAGATTTGACTTCTCCCTCAGTCCTAACGCCCTCTGCAAACTAG

Upstream 100 bases:

>100_bases
GGTTCAGGCTTTCTCCATTTTCCCCCAATCATTAGGATGCACCGATCAGCGGCTGCCATATTTCGCTCAGATCGGCCAAC
TTTTTTCTGTTCCAATCGTT

Downstream 100 bases:

>100_bases
ATTAAACGAGATTTAGTTTGTTGATCCCGTTCCCCTGCAGTGACAGCCGAAAAAATAAGCCTGGGAACTTATGGATCTGC
GCCATTTTTTGAGATACTAT

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MQCPYCQHTDSRVLESRSTGAGRSIRRRRECLSCKHRFTTYERIEFVPISVIKRNGQSEAFDRSKILRGMVRACEKTTVL
PSTLEAIAEEIEAQLQQKPKRSITTAQIGDLVLHRLRQESEVAYVRFASVYRQFQGVDDFIETLSHLQDNAEQANLWIQT
LNEDEESEDLTSPSVLTPSAN

Sequences:

>Translated_181_residues
MQCPYCQHTDSRVLESRSTGAGRSIRRRRECLSCKHRFTTYERIEFVPISVIKRNGQSEAFDRSKILRGMVRACEKTTVL
PSTLEAIAEEIEAQLQQKPKRSITTAQIGDLVLHRLRQESEVAYVRFASVYRQFQGVDDFIETLSHLQDNAEQANLWIQT
LNEDEESEDLTSPSVLTPSAN
>Mature_181_residues
MQCPYCQHTDSRVLESRSTGAGRSIRRRRECLSCKHRFTTYERIEFVPISVIKRNGQSEAFDRSKILRGMVRACEKTTVL
PSTLEAIAEEIEAQLQQKPKRSITTAQIGDLVLHRLRQESEVAYVRFASVYRQFQGVDDFIETLSHLQDNAEQANLWIQT
LNEDEESEDLTSPSVLTPSAN

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=149, Percent_Identity=42.2818791946309, Blast_Score=133, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_SYNP2 (B1XJ17)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734215.1
- GeneID:   6056955
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0956
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- ProtClustDB:   PRK00464
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 20734; Mature: 20734

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCPYCQHTDSRVLESRSTGAGRSIRRRRECLSCKHRFTTYERIEFVPISVIKRNGQSEA
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH
FDRSKILRGMVRACEKTTVLPSTLEAIAEEIEAQLQQKPKRSITTAQIGDLVLHRLRQES
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
EVAYVRFASVYRQFQGVDDFIETLSHLQDNAEQANLWIQTLNEDEESEDLTSPSVLTPSA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
N
C
>Mature Secondary Structure
MQCPYCQHTDSRVLESRSTGAGRSIRRRRECLSCKHRFTTYERIEFVPISVIKRNGQSEA
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH
FDRSKILRGMVRACEKTTVLPSTLEAIAEEIEAQLQQKPKRSITTAQIGDLVLHRLRQES
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
EVAYVRFASVYRQFQGVDDFIETLSHLQDNAEQANLWIQTLNEDEESEDLTSPSVLTPSA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA