| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077580
Identifier: 170077580
GI number: 170077580
Start: 988390
End: 989802
Strand: Reverse
Name: 170077580
Synonym: SYNPCC7002_A0959
Alternate gene names: NA
Gene position: 989802-988390 (Counterclockwise)
Preceding gene: 170077584
Following gene: 170077578
Centisome position: 32.91
GC content: 54.56
Gene sequence:
>1413_bases ATGAAGTGGCACCATTGGGTGGGAATTGGCAGCGTTGTGGTCGGGATAATTATGGTCGGGGCGATCGCCCCTGGGGTTTC CCAGCATTATCCCTATTACAACAACTCCTTCTCGTGGGGACAGACGGGGCGCGATGGTCGTCCTGGCCGCGATGGTCGCT CCGGCGGCAGTGCCCAAAATCAAACGATCATTACCGATGGCACCGCCCGCACGTTTGACCTCAAAGGTGGCGACGGCGAA CCAGGCACCGACGGCGAATATGGCGAAGCAGCCCGCTGTTCTAGCTATTGGCGACGACCAGAACACAATATTCGGGGCGC TGATGGGGGCGATGGCGGTCGAGGCGGCAACGGTGGTAATGGAGGCGATGGCGCGGATGTGACAATTTTCTATCAACAAC CCCAGGATCTCCGCCTAATTTTTATTGATAATCGCGGTGGCGAAGGTGGACTAGAAGGACGAGGCGGTTACGGGGGGCGC GGCTGTGGTTGCCCCTATTCCTCTTGGGTCGTCGAAACTTGCCGTTTGGAAGAAGTGGCCAGCAATAATCCCGAAGAAAA ACCTAGAAAAGAAGAGCGATGTACTCAACAACGCTATTACTGTACCCCCGGTCGCAATGGTCGTAACGCTCCCGATGGTA ACCCTGGCAGAAATGGAACTCCTGGCACCGTGACCCTCATTCAAAATTTAACCGCTATCCCCACCGACAATCCCAACACC ACCATTTCTCTCGCCGCATTGGAACGATCGGGGACGACCCTCAGCAAAAATATTTGGCGATCGCCTACAGGATTACGCAG CAAATTAGCCAGCGGTTCCCAAATCCCCGATACCTATCGCGAATATGTCGAACTTTTCACTGCGCCGATCCAACTGGTTT GGGCCGCTGATCAACTCCAAACTGCTTTTAACCAAGCACAATTTAGCCTCAGCCTGGGAGACAGTCGGCAGTTAGCAGTA CAACAATCGGGGGAAGCTTGGTTAGATTACACCGTTCAACCCCAGGGTAACGGTTTCCAAATCCAAGTTAACCGGGCAAT GGAAGCAGATGAGGCCACCCAATTGATCCGCCAGGGTTTGCGGGGAACTGGCCGCGATCTAACTTTCAGTATCCTCGATC TCGGGCCTCGGAGCGATTGGTTAGACACACAATTTATGGTCACCTACCGCACCCGTAATCCCACACCCCAATTTCGGGAG GGCTACACCTACGAAACCCGTTATAGCGGACGCCTCTCCCCAGAAGCAGTGCAGCAAATTGGTTCAGAATATCAACTACG CCTGGGAGATCTCCCCTTGGCTCAAGAGTATTTCCAGAGCGGAATGGTGGTGGATTTAGAAATTACAGCCGAGCGGCGTT TCGGAGAACATCAGACCCAACAGGTGATCCAATGGCGGGGGGCGCTGCCCTAG
Upstream 100 bases:
>100_bases CGCCTTTTGCCTGGTGGACTGCTGGGTACACTAGAAACTAGAGAGGTGTCTAGCCCGTCACGGAGTAATATCCGGGCGGA TAAATCAGGGGTCAAACGCG
Downstream 100 bases:
>100_bases GCCCGCTGCCGCAAAAATTGCAGTAACTTTTCAAATTCTGTAGGTAAAGGGGCGATCGCCTCGATCGTTTCTCCGGTCAC TGGATGTTTGACGATTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MKWHHWVGIGSVVVGIIMVGAIAPGVSQHYPYYNNSFSWGQTGRDGRPGRDGRSGGSAQNQTIITDGTARTFDLKGGDGE PGTDGEYGEAARCSSYWRRPEHNIRGADGGDGGRGGNGGNGGDGADVTIFYQQPQDLRLIFIDNRGGEGGLEGRGGYGGR GCGCPYSSWVVETCRLEEVASNNPEEKPRKEERCTQQRYYCTPGRNGRNAPDGNPGRNGTPGTVTLIQNLTAIPTDNPNT TISLAALERSGTTLSKNIWRSPTGLRSKLASGSQIPDTYREYVELFTAPIQLVWAADQLQTAFNQAQFSLSLGDSRQLAV QQSGEAWLDYTVQPQGNGFQIQVNRAMEADEATQLIRQGLRGTGRDLTFSILDLGPRSDWLDTQFMVTYRTRNPTPQFRE GYTYETRYSGRLSPEAVQQIGSEYQLRLGDLPLAQEYFQSGMVVDLEITAERRFGEHQTQQVIQWRGALP
Sequences:
>Translated_470_residues MKWHHWVGIGSVVVGIIMVGAIAPGVSQHYPYYNNSFSWGQTGRDGRPGRDGRSGGSAQNQTIITDGTARTFDLKGGDGE PGTDGEYGEAARCSSYWRRPEHNIRGADGGDGGRGGNGGNGGDGADVTIFYQQPQDLRLIFIDNRGGEGGLEGRGGYGGR GCGCPYSSWVVETCRLEEVASNNPEEKPRKEERCTQQRYYCTPGRNGRNAPDGNPGRNGTPGTVTLIQNLTAIPTDNPNT TISLAALERSGTTLSKNIWRSPTGLRSKLASGSQIPDTYREYVELFTAPIQLVWAADQLQTAFNQAQFSLSLGDSRQLAV QQSGEAWLDYTVQPQGNGFQIQVNRAMEADEATQLIRQGLRGTGRDLTFSILDLGPRSDWLDTQFMVTYRTRNPTPQFRE GYTYETRYSGRLSPEAVQQIGSEYQLRLGDLPLAQEYFQSGMVVDLEITAERRFGEHQTQQVIQWRGALP >Mature_470_residues MKWHHWVGIGSVVVGIIMVGAIAPGVSQHYPYYNNSFSWGQTGRDGRPGRDGRSGGSAQNQTIITDGTARTFDLKGGDGE PGTDGEYGEAARCSSYWRRPEHNIRGADGGDGGRGGNGGNGGDGADVTIFYQQPQDLRLIFIDNRGGEGGLEGRGGYGGR GCGCPYSSWVVETCRLEEVASNNPEEKPRKEERCTQQRYYCTPGRNGRNAPDGNPGRNGTPGTVTLIQNLTAIPTDNPNT TISLAALERSGTTLSKNIWRSPTGLRSKLASGSQIPDTYREYVELFTAPIQLVWAADQLQTAFNQAQFSLSLGDSRQLAV QQSGEAWLDYTVQPQGNGFQIQVNRAMEADEATQLIRQGLRGTGRDLTFSILDLGPRSDWLDTQFMVTYRTRNPTPQFRE GYTYETRYSGRLSPEAVQQIGSEYQLRLGDLPLAQEYFQSGMVVDLEITAERRFGEHQTQQVIQWRGALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51596; Mature: 51596
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWHHWVGIGSVVVGIIMVGAIAPGVSQHYPYYNNSFSWGQTGRDGRPGRDGRSGGSAQN CCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QTIITDGTARTFDLKGGDGEPGTDGEYGEAARCSSYWRRPEHNIRGADGGDGGRGGNGGN CEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GGDGADVTIFYQQPQDLRLIFIDNRGGEGGLEGRGGYGGRGCGCPYSSWVVETCRLEEVA CCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SNNPEEKPRKEERCTQQRYYCTPGRNGRNAPDGNPGRNGTPGTVTLIQNLTAIPTDNPNT CCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCC TISLAALERSGTTLSKNIWRSPTGLRSKLASGSQIPDTYREYVELFTAPIQLVWAADQLQ EEEEEEEECCCCCHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHH TAFNQAQFSLSLGDSRQLAVQQSGEAWLDYTVQPQGNGFQIQVNRAMEADEATQLIRQGL HHHHHHEEEEECCCCCEEEEECCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHC RGTGRDLTFSILDLGPRSDWLDTQFMVTYRTRNPTPQFREGYTYETRYSGRLSPEAVQQI CCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHCCCCEEEECCCCCCHHHHHHC GSEYQLRLGDLPLAQEYFQSGMVVDLEITAERRFGEHQTQQVIQWRGALP CCCEEEEECCCCHHHHHHHCCCEEEEEEECCHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKWHHWVGIGSVVVGIIMVGAIAPGVSQHYPYYNNSFSWGQTGRDGRPGRDGRSGGSAQN CCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QTIITDGTARTFDLKGGDGEPGTDGEYGEAARCSSYWRRPEHNIRGADGGDGGRGGNGGN CEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GGDGADVTIFYQQPQDLRLIFIDNRGGEGGLEGRGGYGGRGCGCPYSSWVVETCRLEEVA CCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SNNPEEKPRKEERCTQQRYYCTPGRNGRNAPDGNPGRNGTPGTVTLIQNLTAIPTDNPNT CCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCC TISLAALERSGTTLSKNIWRSPTGLRSKLASGSQIPDTYREYVELFTAPIQLVWAADQLQ EEEEEEEECCCCCHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHH TAFNQAQFSLSLGDSRQLAVQQSGEAWLDYTVQPQGNGFQIQVNRAMEADEATQLIRQGL HHHHHHEEEEECCCCCEEEEECCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHC RGTGRDLTFSILDLGPRSDWLDTQFMVTYRTRNPTPQFREGYTYETRYSGRLSPEAVQQI CCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHCCCCEEEECCCCCCHHHHHHC GSEYQLRLGDLPLAQEYFQSGMVVDLEITAERRFGEHQTQQVIQWRGALP CCCEEEEECCCCHHHHHHHCCCEEEEEEECCHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA