Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077580

Identifier: 170077580

GI number: 170077580

Start: 988390

End: 989802

Strand: Reverse

Name: 170077580

Synonym: SYNPCC7002_A0959

Alternate gene names: NA

Gene position: 989802-988390 (Counterclockwise)

Preceding gene: 170077584

Following gene: 170077578

Centisome position: 32.91

GC content: 54.56

Gene sequence:

>1413_bases
ATGAAGTGGCACCATTGGGTGGGAATTGGCAGCGTTGTGGTCGGGATAATTATGGTCGGGGCGATCGCCCCTGGGGTTTC
CCAGCATTATCCCTATTACAACAACTCCTTCTCGTGGGGACAGACGGGGCGCGATGGTCGTCCTGGCCGCGATGGTCGCT
CCGGCGGCAGTGCCCAAAATCAAACGATCATTACCGATGGCACCGCCCGCACGTTTGACCTCAAAGGTGGCGACGGCGAA
CCAGGCACCGACGGCGAATATGGCGAAGCAGCCCGCTGTTCTAGCTATTGGCGACGACCAGAACACAATATTCGGGGCGC
TGATGGGGGCGATGGCGGTCGAGGCGGCAACGGTGGTAATGGAGGCGATGGCGCGGATGTGACAATTTTCTATCAACAAC
CCCAGGATCTCCGCCTAATTTTTATTGATAATCGCGGTGGCGAAGGTGGACTAGAAGGACGAGGCGGTTACGGGGGGCGC
GGCTGTGGTTGCCCCTATTCCTCTTGGGTCGTCGAAACTTGCCGTTTGGAAGAAGTGGCCAGCAATAATCCCGAAGAAAA
ACCTAGAAAAGAAGAGCGATGTACTCAACAACGCTATTACTGTACCCCCGGTCGCAATGGTCGTAACGCTCCCGATGGTA
ACCCTGGCAGAAATGGAACTCCTGGCACCGTGACCCTCATTCAAAATTTAACCGCTATCCCCACCGACAATCCCAACACC
ACCATTTCTCTCGCCGCATTGGAACGATCGGGGACGACCCTCAGCAAAAATATTTGGCGATCGCCTACAGGATTACGCAG
CAAATTAGCCAGCGGTTCCCAAATCCCCGATACCTATCGCGAATATGTCGAACTTTTCACTGCGCCGATCCAACTGGTTT
GGGCCGCTGATCAACTCCAAACTGCTTTTAACCAAGCACAATTTAGCCTCAGCCTGGGAGACAGTCGGCAGTTAGCAGTA
CAACAATCGGGGGAAGCTTGGTTAGATTACACCGTTCAACCCCAGGGTAACGGTTTCCAAATCCAAGTTAACCGGGCAAT
GGAAGCAGATGAGGCCACCCAATTGATCCGCCAGGGTTTGCGGGGAACTGGCCGCGATCTAACTTTCAGTATCCTCGATC
TCGGGCCTCGGAGCGATTGGTTAGACACACAATTTATGGTCACCTACCGCACCCGTAATCCCACACCCCAATTTCGGGAG
GGCTACACCTACGAAACCCGTTATAGCGGACGCCTCTCCCCAGAAGCAGTGCAGCAAATTGGTTCAGAATATCAACTACG
CCTGGGAGATCTCCCCTTGGCTCAAGAGTATTTCCAGAGCGGAATGGTGGTGGATTTAGAAATTACAGCCGAGCGGCGTT
TCGGAGAACATCAGACCCAACAGGTGATCCAATGGCGGGGGGCGCTGCCCTAG

Upstream 100 bases:

>100_bases
CGCCTTTTGCCTGGTGGACTGCTGGGTACACTAGAAACTAGAGAGGTGTCTAGCCCGTCACGGAGTAATATCCGGGCGGA
TAAATCAGGGGTCAAACGCG

Downstream 100 bases:

>100_bases
GCCCGCTGCCGCAAAAATTGCAGTAACTTTTCAAATTCTGTAGGTAAAGGGGCGATCGCCTCGATCGTTTCTCCGGTCAC
TGGATGTTTGACGATTAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKWHHWVGIGSVVVGIIMVGAIAPGVSQHYPYYNNSFSWGQTGRDGRPGRDGRSGGSAQNQTIITDGTARTFDLKGGDGE
PGTDGEYGEAARCSSYWRRPEHNIRGADGGDGGRGGNGGNGGDGADVTIFYQQPQDLRLIFIDNRGGEGGLEGRGGYGGR
GCGCPYSSWVVETCRLEEVASNNPEEKPRKEERCTQQRYYCTPGRNGRNAPDGNPGRNGTPGTVTLIQNLTAIPTDNPNT
TISLAALERSGTTLSKNIWRSPTGLRSKLASGSQIPDTYREYVELFTAPIQLVWAADQLQTAFNQAQFSLSLGDSRQLAV
QQSGEAWLDYTVQPQGNGFQIQVNRAMEADEATQLIRQGLRGTGRDLTFSILDLGPRSDWLDTQFMVTYRTRNPTPQFRE
GYTYETRYSGRLSPEAVQQIGSEYQLRLGDLPLAQEYFQSGMVVDLEITAERRFGEHQTQQVIQWRGALP

Sequences:

>Translated_470_residues
MKWHHWVGIGSVVVGIIMVGAIAPGVSQHYPYYNNSFSWGQTGRDGRPGRDGRSGGSAQNQTIITDGTARTFDLKGGDGE
PGTDGEYGEAARCSSYWRRPEHNIRGADGGDGGRGGNGGNGGDGADVTIFYQQPQDLRLIFIDNRGGEGGLEGRGGYGGR
GCGCPYSSWVVETCRLEEVASNNPEEKPRKEERCTQQRYYCTPGRNGRNAPDGNPGRNGTPGTVTLIQNLTAIPTDNPNT
TISLAALERSGTTLSKNIWRSPTGLRSKLASGSQIPDTYREYVELFTAPIQLVWAADQLQTAFNQAQFSLSLGDSRQLAV
QQSGEAWLDYTVQPQGNGFQIQVNRAMEADEATQLIRQGLRGTGRDLTFSILDLGPRSDWLDTQFMVTYRTRNPTPQFRE
GYTYETRYSGRLSPEAVQQIGSEYQLRLGDLPLAQEYFQSGMVVDLEITAERRFGEHQTQQVIQWRGALP
>Mature_470_residues
MKWHHWVGIGSVVVGIIMVGAIAPGVSQHYPYYNNSFSWGQTGRDGRPGRDGRSGGSAQNQTIITDGTARTFDLKGGDGE
PGTDGEYGEAARCSSYWRRPEHNIRGADGGDGGRGGNGGNGGDGADVTIFYQQPQDLRLIFIDNRGGEGGLEGRGGYGGR
GCGCPYSSWVVETCRLEEVASNNPEEKPRKEERCTQQRYYCTPGRNGRNAPDGNPGRNGTPGTVTLIQNLTAIPTDNPNT
TISLAALERSGTTLSKNIWRSPTGLRSKLASGSQIPDTYREYVELFTAPIQLVWAADQLQTAFNQAQFSLSLGDSRQLAV
QQSGEAWLDYTVQPQGNGFQIQVNRAMEADEATQLIRQGLRGTGRDLTFSILDLGPRSDWLDTQFMVTYRTRNPTPQFRE
GYTYETRYSGRLSPEAVQQIGSEYQLRLGDLPLAQEYFQSGMVVDLEITAERRFGEHQTQQVIQWRGALP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51596; Mature: 51596

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWHHWVGIGSVVVGIIMVGAIAPGVSQHYPYYNNSFSWGQTGRDGRPGRDGRSGGSAQN
CCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QTIITDGTARTFDLKGGDGEPGTDGEYGEAARCSSYWRRPEHNIRGADGGDGGRGGNGGN
CEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GGDGADVTIFYQQPQDLRLIFIDNRGGEGGLEGRGGYGGRGCGCPYSSWVVETCRLEEVA
CCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SNNPEEKPRKEERCTQQRYYCTPGRNGRNAPDGNPGRNGTPGTVTLIQNLTAIPTDNPNT
CCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCC
TISLAALERSGTTLSKNIWRSPTGLRSKLASGSQIPDTYREYVELFTAPIQLVWAADQLQ
EEEEEEEECCCCCHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHH
TAFNQAQFSLSLGDSRQLAVQQSGEAWLDYTVQPQGNGFQIQVNRAMEADEATQLIRQGL
HHHHHHEEEEECCCCCEEEEECCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHC
RGTGRDLTFSILDLGPRSDWLDTQFMVTYRTRNPTPQFREGYTYETRYSGRLSPEAVQQI
CCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHCCCCEEEECCCCCCHHHHHHC
GSEYQLRLGDLPLAQEYFQSGMVVDLEITAERRFGEHQTQQVIQWRGALP
CCCEEEEECCCCHHHHHHHCCCEEEEEEECCHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKWHHWVGIGSVVVGIIMVGAIAPGVSQHYPYYNNSFSWGQTGRDGRPGRDGRSGGSAQN
CCCEEEECHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QTIITDGTARTFDLKGGDGEPGTDGEYGEAARCSSYWRRPEHNIRGADGGDGGRGGNGGN
CEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GGDGADVTIFYQQPQDLRLIFIDNRGGEGGLEGRGGYGGRGCGCPYSSWVVETCRLEEVA
CCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SNNPEEKPRKEERCTQQRYYCTPGRNGRNAPDGNPGRNGTPGTVTLIQNLTAIPTDNPNT
CCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCC
TISLAALERSGTTLSKNIWRSPTGLRSKLASGSQIPDTYREYVELFTAPIQLVWAADQLQ
EEEEEEEECCCCCHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHH
TAFNQAQFSLSLGDSRQLAVQQSGEAWLDYTVQPQGNGFQIQVNRAMEADEATQLIRQGL
HHHHHHEEEEECCCCCEEEEECCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHC
RGTGRDLTFSILDLGPRSDWLDTQFMVTYRTRNPTPQFREGYTYETRYSGRLSPEAVQQI
CCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHCCCCEEEECCCCCCHHHHHHC
GSEYQLRLGDLPLAQEYFQSGMVVDLEITAERRFGEHQTQQVIQWRGALP
CCCEEEEECCCCHHHHHHHCCCEEEEEEECCHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA