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The map label for this gene is yycF [H]

Identifier: 170077559

GI number: 170077559

Start: 967453

End: 968172

Strand: Direct

Name: yycF [H]

Synonym: SYNPCC7002_A0937

Alternate gene names: 170077559

Gene position: 967453-968172 (Clockwise)

Preceding gene: 170077557

Following gene: 170077560

Centisome position: 32.16

GC content: 49.86

Gene sequence:

>720_bases
ATGGCCGGTGCCAAAATTTTAGTTGTTGATGATGATCCAGCAATTCGCACACTAATTGTTCGATTTCTCGGGCAGAAAGG
TTATGCAGTGGCAGCAGCAACGGATGGACAATCCGCTAAAGAAACATTTCAATCCTTTAGCCCTGACCTGGTAATCCTCG
ACATTAATCTGCCAGATACCCTCGGCTATGCCCTCTGCGAGCAAATGCAGGAGTCTAAGGATACTTACGTGTTGATCCTG
ACCAGTCGCACCGATGCGACCGATAAAGTACGAGGTTTTACCCAAGGGGCAGATGATTACCTGACTAAACCCTTTGACAT
TATTGAACTGGAACATCGTGTCCATGCGATCCTCCGCCGTCAGCGATCGCCCGTTGCCCCCCCAGCCCGAGACCAAAGCC
TCGATTTTGCCGATTTAAACATTGACCCGATGCGCCATGTGGTCGCTGTCAAGGGAGAACCCGTCAACCTAACGGCCCTA
GAATTTAACCTGCTCCACTTCCTCGCGAAAAATGCGAACAAAGTTTGGCGGCGCTCAGAACTGATTCAAGCAGTGTGGGG
CTACGATTACCTAGGCGATCAACGGGTCGTGGATGTCCATATCGGACAAATTCGTCGCAAACTTGACAACCTCATGCAGC
AAGAAAACCCGATCAAAACCGTGCGGGGTGTGGGCTATATGTTTGAAACAACATTAAACTCCTTTAGCGAAACCCGCTGA

Upstream 100 bases:

>100_bases
TAAAATAATGTGTTAGGGAGGAATATGATCGCACACTAATCAAACAAGCTTTAGTTTGAAGCCTTGATTTACTATTCGCC
GAAAGTATCTTGAAGAGTCT

Downstream 100 bases:

>100_bases
TCAGTTCCCAGTCTGTGGCGTCATTTGACAGGAAAAGACCCCCCAAAAGTGAGGGTCTGAAACTCTATCTTGGTCTTTTC
TCTTCCCTCTGCTGCCTATA

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAGAKILVVDDDPAIRTLIVRFLGQKGYAVAAATDGQSAKETFQSFSPDLVILDINLPDTLGYALCEQMQESKDTYVLIL
TSRTDATDKVRGFTQGADDYLTKPFDIIELEHRVHAILRRQRSPVAPPARDQSLDFADLNIDPMRHVVAVKGEPVNLTAL
EFNLLHFLAKNANKVWRRSELIQAVWGYDYLGDQRVVDVHIGQIRRKLDNLMQQENPIKTVRGVGYMFETTLNSFSETR

Sequences:

>Translated_239_residues
MAGAKILVVDDDPAIRTLIVRFLGQKGYAVAAATDGQSAKETFQSFSPDLVILDINLPDTLGYALCEQMQESKDTYVLIL
TSRTDATDKVRGFTQGADDYLTKPFDIIELEHRVHAILRRQRSPVAPPARDQSLDFADLNIDPMRHVVAVKGEPVNLTAL
EFNLLHFLAKNANKVWRRSELIQAVWGYDYLGDQRVVDVHIGQIRRKLDNLMQQENPIKTVRGVGYMFETTLNSFSETR
>Mature_238_residues
AGAKILVVDDDPAIRTLIVRFLGQKGYAVAAATDGQSAKETFQSFSPDLVILDINLPDTLGYALCEQMQESKDTYVLILT
SRTDATDKVRGFTQGADDYLTKPFDIIELEHRVHAILRRQRSPVAPPARDQSLDFADLNIDPMRHVVAVKGEPVNLTALE
FNLLHFLAKNANKVWRRSELIQAVWGYDYLGDQRVVDVHIGQIRRKLDNLMQQENPIKTVRGVGYMFETTLNSFSETR

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH, ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF. Binds to the ftsAZ P1 promoter seque

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=229, Percent_Identity=36.2445414847162, Blast_Score=153, Evalue=8e-39,
Organism=Escherichia coli, GI87082012, Length=224, Percent_Identity=34.375, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=33.6322869955157, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=32.5991189427313, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=34.0807174887892, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=33.6283185840708, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=31.2775330396476, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=31.858407079646, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=34.3612334801762, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=35.2422907488987, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=33.0472103004292, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1787375, Length=226, Percent_Identity=31.4159292035398, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=33.7777777777778, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=30.9012875536481, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790299, Length=105, Percent_Identity=37.1428571428571, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=32.2033898305085, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787487, Length=120, Percent_Identity=32.5, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26962; Mature: 26831

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAKILVVDDDPAIRTLIVRFLGQKGYAVAAATDGQSAKETFQSFSPDLVILDINLPDT
CCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCHH
LGYALCEQMQESKDTYVLILTSRTDATDKVRGFTQGADDYLTKPFDIIELEHRVHAILRR
HHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHH
QRSPVAPPARDQSLDFADLNIDPMRHVVAVKGEPVNLTALEFNLLHFLAKNANKVWRRSE
CCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHCHHHHHHHHH
LIQAVWGYDYLGDQRVVDVHIGQIRRKLDNLMQQENPIKTVRGVGYMFETTLNSFSETR
HHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGAKILVVDDDPAIRTLIVRFLGQKGYAVAAATDGQSAKETFQSFSPDLVILDINLPDT
CCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCHH
LGYALCEQMQESKDTYVLILTSRTDATDKVRGFTQGADDYLTKPFDIIELEHRVHAILRR
HHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHH
QRSPVAPPARDQSLDFADLNIDPMRHVVAVKGEPVNLTALEFNLLHFLAKNANKVWRRSE
CCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHCHHHHHHHHH
LIQAVWGYDYLGDQRVVDVHIGQIRRKLDNLMQQENPIKTVRGVGYMFETTLNSFSETR
HHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 9829949; 10878122 [H]