| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077557
Identifier: 170077557
GI number: 170077557
Start: 965342
End: 965959
Strand: Direct
Name: 170077557
Synonym: SYNPCC7002_A0935
Alternate gene names: NA
Gene position: 965342-965959 (Clockwise)
Preceding gene: 170077556
Following gene: 170077559
Centisome position: 32.09
GC content: 44.5
Gene sequence:
>618_bases ATGTTTGGTCGAAAATTCTTCACACTTTTAACGGCTGTCTCCACAGTGTTCCTGACTCCTATTTACGGAGCGGCTCAAAC GATGCAAGATCAAAGTAATACGATGAATAATGAAAATTCATTGGGGAATAGTGCGACTGGGGTAGTCAACCAAACCGCTG TGTACAACTTAGGTCAAAGTGCCACCTACGGTTTTAGAGGGATCGTTTGTCCCCGCCCTTCCTTTGTGCTCAGTGGCTCT GCAAATGGCAATACATTTGATGGGGAGAGTTCAAATTCCTACGCTCTTTCCGGTGCCATTATTGTGCCCCTCGGTGGTCA AGTGGGCAGCAACTGTAGAGATTTCAGCACTACCCTACTGGAAAGAGAACAAGCCGAATTAGCAAAGTTTCAAATCCAAT CTTCAGCGGAAACAGTCAAACTTTGTGCTGACATGATTTCTTCAGGCATTCAAGTAGATCCAGAGGTTTATCCAGTACTG GCGCGGCAATGTTCTGCAGTTCGGTTGGTTTCACAAGGACGGGCTTCTAGCACAAATGAAGCCCGACAAAATGAATCGAC TCACAATAAGCTAGATGATGATGTAGAATTGTCTGCTAATTACTTAAAAACTGAGTAA
Upstream 100 bases:
>100_bases CACGAGGTTCCTCTACAACGGTCAAAGGCTCAGCAGAGACCTATGGCACCACCTTTATTTTTGAAAGCAATCTCTCCGTT GAGTTCTAAAGGTTTTATTT
Downstream 100 bases:
>100_bases ATATAATATTTTGAATAGTGAGGAAAAATATCTCAAAGGCTATATGAAAATAAAAAAAGAGCGGCTAAAAAATCTTCAGC TTACAGTGACGCCTGTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MFGRKFFTLLTAVSTVFLTPIYGAAQTMQDQSNTMNNENSLGNSATGVVNQTAVYNLGQSATYGFRGIVCPRPSFVLSGS ANGNTFDGESSNSYALSGAIIVPLGGQVGSNCRDFSTTLLEREQAELAKFQIQSSAETVKLCADMISSGIQVDPEVYPVL ARQCSAVRLVSQGRASSTNEARQNESTHNKLDDDVELSANYLKTE
Sequences:
>Translated_205_residues MFGRKFFTLLTAVSTVFLTPIYGAAQTMQDQSNTMNNENSLGNSATGVVNQTAVYNLGQSATYGFRGIVCPRPSFVLSGS ANGNTFDGESSNSYALSGAIIVPLGGQVGSNCRDFSTTLLEREQAELAKFQIQSSAETVKLCADMISSGIQVDPEVYPVL ARQCSAVRLVSQGRASSTNEARQNESTHNKLDDDVELSANYLKTE >Mature_205_residues MFGRKFFTLLTAVSTVFLTPIYGAAQTMQDQSNTMNNENSLGNSATGVVNQTAVYNLGQSATYGFRGIVCPRPSFVLSGS ANGNTFDGESSNSYALSGAIIVPLGGQVGSNCRDFSTTLLEREQAELAKFQIQSSAETVKLCADMISSGIQVDPEVYPVL ARQCSAVRLVSQGRASSTNEARQNESTHNKLDDDVELSANYLKTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21946; Mature: 21946
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRKFFTLLTAVSTVFLTPIYGAAQTMQDQSNTMNNENSLGNSATGVVNQTAVYNLGQS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCC ATYGFRGIVCPRPSFVLSGSANGNTFDGESSNSYALSGAIIVPLGGQVGSNCRDFSTTLL CCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCHHHHHHHHH EREQAELAKFQIQSSAETVKLCADMISSGIQVDPEVYPVLARQCSAVRLVSQGRASSTNE HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH ARQNESTHNKLDDDVELSANYLKTE HHHCCCHHHCCCCCHHHCCHHHCCC >Mature Secondary Structure MFGRKFFTLLTAVSTVFLTPIYGAAQTMQDQSNTMNNENSLGNSATGVVNQTAVYNLGQS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCC ATYGFRGIVCPRPSFVLSGSANGNTFDGESSNSYALSGAIIVPLGGQVGSNCRDFSTTLL CCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCHHHHHHHHH EREQAELAKFQIQSSAETVKLCADMISSGIQVDPEVYPVLARQCSAVRLVSQGRASSTNE HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH ARQNESTHNKLDDDVELSANYLKTE HHHCCCHHHCCCCCHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA