| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is ybeZ [C]
Identifier: 170077560
GI number: 170077560
Start: 968304
End: 969311
Strand: Direct
Name: ybeZ [C]
Synonym: SYNPCC7002_A0938
Alternate gene names: 170077560
Gene position: 968304-969311 (Clockwise)
Preceding gene: 170077559
Following gene: 170077561
Centisome position: 32.19
GC content: 50.79
Gene sequence:
>1008_bases ATGAGTGAAACCTCGCAAACCATTCAACTCCCCAGCCTAGAAAGTGCGATCGCCCTCTCTGGCGTCAAGGAAGAAAACCT CAAATTTCTATCCCAGCACACCGGCACAACTGTGGTCTTACGGGGACAAGAGCTACTGGTGCGAGGTCGCGAAAAGGCCG TTAATCGTTGCATTAAAGCGCTCTATTTCCTGCAACCTTTTTGGGAAACAGCCCAACACATCTCCCAACCAGATCTCCTG ACGGCCTTCCATGCCATTGATACCCATCAAGTCGAAGAATACCAAGATCTCCAAAAGCAGACTCTGGGGAAAACCAGACG TGGCGAATATATCCGGGCCAAAACATTTCGACAGCGCCAATACATCCAACTCATTCAAAAACATGACATCACCTTTGGCA TTGGGCCGGCGGGTACTGGGAAAACCTTTCTCGCTTCAGTCCTAGCCGTCCAAGCCCTGCTCCGGGATGAGGTTGAGCGT TTGATTTTAACCCGGCCAGCGGTGGAAGCTGGAGAAAAACTAGGCTTTTTGCCGGGGGACTTGCAACAAAAAGTTGATCC TTTCCTACGTCCTCTATACGACGCCCTCTACCAATTTATCGATCCGCTGAAACTGCCGGAACTAATGGAAAAAGGGCGCA TTGAAATCGCACCATTAGCCTATATGCGGGGACGCACCCTCAGCAATTCCTTTGTGATCGTCGATGAGGCCCAAAATACG ACCCCAGCCCAGCTCAAAATGGTGCTGACACGGTTGGGTTTCGGTTCTAAGATGGTGATCACCGGGGACATCACCCAAAC GGATTTGCCGAGTCATCAGTCTTCGGGATTGATTATGGCGAGTAAGATTCTCCAGTCTGTAGAAGGGATTGGCTTTTGTT ATCTGACGGATGCTGATGTTGTGCGTCACCCCCTCGTCCAGAGAATCGTTAGCGCCTATGATCGATTTGAGAGCCATGGT ACGACCAGCCAAAAACGGCGGCCTTTGGGACAAACGAAAGGAGGGTAG
Upstream 100 bases:
>100_bases GAAAAGACCCCCCAAAAGTGAGGGTCTGAAACTCTATCTTGGTCTTTTCTCTTCCCTCTGCTGCCTATAATTAAGGCTGA TCTATTTTTTTGCTTTGCCC
Downstream 100 bases:
>100_bases CAAGGGGGCCATACCCTAATCACCTATTTTGTTATGACGACAATTCTAGTCATTGAAGATGATGATATTGTGCGGAAGCT AATCCGTAAAATCCTAACGC
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSETSQTIQLPSLESAIALSGVKEENLKFLSQHTGTTVVLRGQELLVRGREKAVNRCIKALYFLQPFWETAQHISQPDLL TAFHAIDTHQVEEYQDLQKQTLGKTRRGEYIRAKTFRQRQYIQLIQKHDITFGIGPAGTGKTFLASVLAVQALLRDEVER LILTRPAVEAGEKLGFLPGDLQQKVDPFLRPLYDALYQFIDPLKLPELMEKGRIEIAPLAYMRGRTLSNSFVIVDEAQNT TPAQLKMVLTRLGFGSKMVITGDITQTDLPSHQSSGLIMASKILQSVEGIGFCYLTDADVVRHPLVQRIVSAYDRFESHG TTSQKRRPLGQTKGG
Sequences:
>Translated_335_residues MSETSQTIQLPSLESAIALSGVKEENLKFLSQHTGTTVVLRGQELLVRGREKAVNRCIKALYFLQPFWETAQHISQPDLL TAFHAIDTHQVEEYQDLQKQTLGKTRRGEYIRAKTFRQRQYIQLIQKHDITFGIGPAGTGKTFLASVLAVQALLRDEVER LILTRPAVEAGEKLGFLPGDLQQKVDPFLRPLYDALYQFIDPLKLPELMEKGRIEIAPLAYMRGRTLSNSFVIVDEAQNT TPAQLKMVLTRLGFGSKMVITGDITQTDLPSHQSSGLIMASKILQSVEGIGFCYLTDADVVRHPLVQRIVSAYDRFESHG TTSQKRRPLGQTKGG >Mature_334_residues SETSQTIQLPSLESAIALSGVKEENLKFLSQHTGTTVVLRGQELLVRGREKAVNRCIKALYFLQPFWETAQHISQPDLLT AFHAIDTHQVEEYQDLQKQTLGKTRRGEYIRAKTFRQRQYIQLIQKHDITFGIGPAGTGKTFLASVLAVQALLRDEVERL ILTRPAVEAGEKLGFLPGDLQQKVDPFLRPLYDALYQFIDPLKLPELMEKGRIEIAPLAYMRGRTLSNSFVIVDEAQNTT PAQLKMVLTRLGFGSKMVITGDITQTDLPSHQSSGLIMASKILQSVEGIGFCYLTDADVVRHPLVQRIVSAYDRFESHGT TSQKRRPLGQTKGG
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=335, Percent_Identity=46.865671641791, Blast_Score=265, Evalue=4e-72, Organism=Escherichia coli, GI1787257, Length=208, Percent_Identity=44.2307692307692, Blast_Score=181, Evalue=5e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 37521; Mature: 37390
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETSQTIQLPSLESAIALSGVKEENLKFLSQHTGTTVVLRGQELLVRGREKAVNRCIKA CCCCCCEEECCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH LYFLQPFWETAQHISQPDLLTAFHAIDTHQVEEYQDLQKQTLGKTRRGEYIRAKTFRQRQ HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YIQLIQKHDITFGIGPAGTGKTFLASVLAVQALLRDEVERLILTRPAVEAGEKLGFLPGD HHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCH LQQKVDPFLRPLYDALYQFIDPLKLPELMEKGRIEIAPLAYMRGRTLSNSFVIVDEAQNT HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEHHHHHCCCCCCCCEEEEECCCCC TPAQLKMVLTRLGFGSKMVITGDITQTDLPSHQSSGLIMASKILQSVEGIGFCYLTDADV CHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHH VRHPLVQRIVSAYDRFESHGTTSQKRRPLGQTKGG HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC >Mature Secondary Structure SETSQTIQLPSLESAIALSGVKEENLKFLSQHTGTTVVLRGQELLVRGREKAVNRCIKA CCCCCEEECCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHH LYFLQPFWETAQHISQPDLLTAFHAIDTHQVEEYQDLQKQTLGKTRRGEYIRAKTFRQRQ HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YIQLIQKHDITFGIGPAGTGKTFLASVLAVQALLRDEVERLILTRPAVEAGEKLGFLPGD HHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCH LQQKVDPFLRPLYDALYQFIDPLKLPELMEKGRIEIAPLAYMRGRTLSNSFVIVDEAQNT HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEHHHHHCCCCCCCCEEEEECCCCC TPAQLKMVLTRLGFGSKMVITGDITQTDLPSHQSSGLIMASKILQSVEGIGFCYLTDADV CHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHH VRHPLVQRIVSAYDRFESHGTTSQKRRPLGQTKGG HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]