| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077497
Identifier: 170077497
GI number: 170077497
Start: 905483
End: 905986
Strand: Direct
Name: 170077497
Synonym: SYNPCC7002_A0875
Alternate gene names: NA
Gene position: 905483-905986 (Clockwise)
Preceding gene: 170077496
Following gene: 170077498
Centisome position: 30.1
GC content: 50.6
Gene sequence:
>504_bases TTGATGGATACCACGACGCAAATTTTGTTTGAAACTGGCAAGGATGCTTTTCTTCAGGGGGAATATCGCCAAAGCATTGA CTATTTCCAGCGCACCGTTGCAAATCTACCTCCCTATTCCCGCGAATCTGGGGAAGTACAACTTTGGCTTGTCAGTGCAT ATCAGGCGAACAATCAAGGGGAAAAGGCGATCGCCCTCTGCCGTGAACTAATGACCCATCCCTTTGCCAGCACCAGCCAA CGGGCCCAGCGACAACTGTACATCCTCGAAGCTCCCAAACTTGAACGGCCCAAGGAGTGGCTCACGGAAATCCCCAGCTT GGATAATCTTGATCCGGCAAAATCGCTCTATGTCGAAGGCAAGAAAAAAGTGGAAACCAAAGCACTTGCCATCGAGGATT TGGAAGATCTATCCCAAATCGAAACCCAGGATAATCAGTTTCTCTGGTGGGCTTTGGGCTTGGGTCTCGTGGGCTTGACC AGTTGGGGCATTTGGGGCGGTTAG
Upstream 100 bases:
>100_bases CACCTATTCAGCGATGTTAGAGGTGCGCCAAATGTTGACGGGCCGCAAAATTTTGTAGGCTAGCAAAAATAAATTCTGCT CTCCAGCGCCACCGTTTTTT
Downstream 100 bases:
>100_bases AATCTCCAGCAATCTAAGAAGGGTAGGGTGGTGCGGTAGGATTTGAAAGCTGTGGCTCCCTTCCCCTCGGTATGATCAAA CATTCGTCAGCCTCAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MMDTTTQILFETGKDAFLQGEYRQSIDYFQRTVANLPPYSRESGEVQLWLVSAYQANNQGEKAIALCRELMTHPFASTSQ RAQRQLYILEAPKLERPKEWLTEIPSLDNLDPAKSLYVEGKKKVETKALAIEDLEDLSQIETQDNQFLWWALGLGLVGLT SWGIWGG
Sequences:
>Translated_167_residues MMDTTTQILFETGKDAFLQGEYRQSIDYFQRTVANLPPYSRESGEVQLWLVSAYQANNQGEKAIALCRELMTHPFASTSQ RAQRQLYILEAPKLERPKEWLTEIPSLDNLDPAKSLYVEGKKKVETKALAIEDLEDLSQIETQDNQFLWWALGLGLVGLT SWGIWGG >Mature_167_residues MMDTTTQILFETGKDAFLQGEYRQSIDYFQRTVANLPPYSRESGEVQLWLVSAYQANNQGEKAIALCRELMTHPFASTSQ RAQRQLYILEAPKLERPKEWLTEIPSLDNLDPAKSLYVEGKKKVETKALAIEDLEDLSQIETQDNQFLWWALGLGLVGLT SWGIWGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19029; Mature: 19029
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDTTTQILFETGKDAFLQGEYRQSIDYFQRTVANLPPYSRESGEVQLWLVSAYQANNQG CCCCHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCC EKAIALCRELMTHPFASTSQRAQRQLYILEAPKLERPKEWLTEIPSLDNLDPAKSLYVEG HHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHCC KKKVETKALAIEDLEDLSQIETQDNQFLWWALGLGLVGLTSWGIWGG CHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMDTTTQILFETGKDAFLQGEYRQSIDYFQRTVANLPPYSRESGEVQLWLVSAYQANNQG CCCCHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCC EKAIALCRELMTHPFASTSQRAQRQLYILEAPKLERPKEWLTEIPSLDNLDPAKSLYVEG HHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHCC KKKVETKALAIEDLEDLSQIETQDNQFLWWALGLGLVGLTSWGIWGG CHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA