| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077496
Identifier: 170077496
GI number: 170077496
Start: 904115
End: 905440
Strand: Direct
Name: 170077496
Synonym: SYNPCC7002_A0874
Alternate gene names: NA
Gene position: 904115-905440 (Clockwise)
Preceding gene: 170077495
Following gene: 170077497
Centisome position: 30.06
GC content: 53.17
Gene sequence:
>1326_bases ATGGCTATTTTGCGCAGTGTACGGTTGGCGATCGCCTGTGGTTTAGGCAAAACAATTACAGCGGTGGTACGGGGCCTCAA GCTTAGTGCGGGCAGTGTCTTACCGGGGGCGATCGCCCGACGCATTTTTCCAGAGATTCTGCCGGATCTGTTCCAACAGG CGAAAAAAGGCGTCATTTTGGTGGTGGGCACAAATGGTAAAACCACGACTTCTCTGCTAATCAAAGCAATCCTCACGGCC CAGGGCTATAAGCTCGCCCACAATGCTACCGGGGCAAATTTGATCAATGGTTTAACGACAGCCCTCCTGGAGCATGCGAA TCTTTTCGGCCAACTCGATATTGACTACGCGATCCTCGAAGTGGATGAAAATATTATTCCGATCCTCCTCAAAACCTGCT CTCCGACCCATATCCTCGCCCTCAATTTATTCCGTGACCAACTCGACCGTTACGGCGAAGTCGATACCATTAGTCAGCGT TGGCAAGCGGCGATCGCCCCCCTCCCGCCGGAAACCACGATTATCGTCAATGGCGACGACCCGACCCTCAATGATCTGGG GCAAAACCTCAGCCAAACGGTGAAATTTTTTGGCCTCAACGAGCCAGACCTATACCTAGAGGCCATCCCCCACGCTGTCG ATTCCATTTATTGTCCCCGCTGCGGTGCGCCCCTCACCTACAAAGGCGTTTACCTGTCCCACCTCGGCGATTACCACTGC GATAGTTGCGGCTTTGCCAAAAATCCCCTCGACATCCACAGTCCAGACTGGGGTCAAATCCTCATCGGCGTTTATAACAA ATACAATACCCTTGCTGCCGCTCTCTTGGCGGAAACCCTGGGTATTCACCGGGACATCATCAACGAACAGATTCAGTCGT TTAAAGCGGCCTTTGGTCGGGCGGAAGAATTAACCGTCCAAGGAAAATCGGTGCGGATTCTGTTGTCAAAAAATCCCGTG GGCATGAACGAAACAGTCCGCGCCGTCACTGATTTACAGCAGCAAGGGAAAACGAGCACCGTCCTCGTCGTACTCAATGA CCGCACCCCCGACGGCACCGATGTGTCCTGGATTTGGGATGTGGATCTCGAAAAGCTCACCCAATCCCCTGGCAAAATTA TCATCAGCGGCGATCGCACCTACGACATGGCCCTGCGGCTTCGCTATTGCGAAGGGGCTGCCGAATTAATTGTGGAACCG GATTTAACAAAAGCCCTCGACCAGGCGATTGCCCTCAGTCCAGCCGATCAAACCCTCCATATCCTGCCCACCTATTCAGC GATGTTAGAGGTGCGCCAAATGTTGACGGGCCGCAAAATTTTGTAG
Upstream 100 bases:
>100_bases GGTTGGTTAGTTGTCAGTCAGACCTCGCCCAGAGATAGGCAGGGACTGCAAGTTCTGTTATGTTTAAGGACTTAGACAGT CTGGGAGACAGCCGAAGGGA
Downstream 100 bases:
>100_bases GCTAGCAAAAATAAATTCTGCTCTCCAGCGCCACCGTTTTTTTTGATGGATACCACGACGCAAATTTTGTTTGAAACTGG CAAGGATGCTTTTCTTCAGG
Product: UDP-N-acetylmuramyl tripeptide synthase
Products: NA
Alternate protein names: Mur Ligase Family Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase; Ligase; Mur Ligase; Mur Ligase Middle Domain Protein; UDP-N-Acetylmuramoylalanine-D-Glutamate Ligase; Conserved Domain Protein; UDP-N-Acetylmuramyl Tripeptide Synthase-Like Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase MurC; Peptide Ligase; UDP-N-Acetylmuramyl Tripeptide Synthetase Like; Murein Ligase; UDP-N-Acetylmuramoyl-L-Alanyl-D-Glutamate-Lysine Ligase; Udp-N-Acetylmuramyl Tripeptide Synthetase; Cell Wall Biosynthesis Protein Mur Ligase Family; UDP-N-Acetylmuramyl Tripeptide Synthetase Related Protein; Mur Ligase Middle Domain-Containing Protein; UDP-N-Acetylmuramyl Peptide Synthetase
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MAILRSVRLAIACGLGKTITAVVRGLKLSAGSVLPGAIARRIFPEILPDLFQQAKKGVILVVGTNGKTTTSLLIKAILTA QGYKLAHNATGANLINGLTTALLEHANLFGQLDIDYAILEVDENIIPILLKTCSPTHILALNLFRDQLDRYGEVDTISQR WQAAIAPLPPETTIIVNGDDPTLNDLGQNLSQTVKFFGLNEPDLYLEAIPHAVDSIYCPRCGAPLTYKGVYLSHLGDYHC DSCGFAKNPLDIHSPDWGQILIGVYNKYNTLAAALLAETLGIHRDIINEQIQSFKAAFGRAEELTVQGKSVRILLSKNPV GMNETVRAVTDLQQQGKTSTVLVVLNDRTPDGTDVSWIWDVDLEKLTQSPGKIIISGDRTYDMALRLRYCEGAAELIVEP DLTKALDQAIALSPADQTLHILPTYSAMLEVRQMLTGRKIL
Sequences:
>Translated_441_residues MAILRSVRLAIACGLGKTITAVVRGLKLSAGSVLPGAIARRIFPEILPDLFQQAKKGVILVVGTNGKTTTSLLIKAILTA QGYKLAHNATGANLINGLTTALLEHANLFGQLDIDYAILEVDENIIPILLKTCSPTHILALNLFRDQLDRYGEVDTISQR WQAAIAPLPPETTIIVNGDDPTLNDLGQNLSQTVKFFGLNEPDLYLEAIPHAVDSIYCPRCGAPLTYKGVYLSHLGDYHC DSCGFAKNPLDIHSPDWGQILIGVYNKYNTLAAALLAETLGIHRDIINEQIQSFKAAFGRAEELTVQGKSVRILLSKNPV GMNETVRAVTDLQQQGKTSTVLVVLNDRTPDGTDVSWIWDVDLEKLTQSPGKIIISGDRTYDMALRLRYCEGAAELIVEP DLTKALDQAIALSPADQTLHILPTYSAMLEVRQMLTGRKIL >Mature_440_residues AILRSVRLAIACGLGKTITAVVRGLKLSAGSVLPGAIARRIFPEILPDLFQQAKKGVILVVGTNGKTTTSLLIKAILTAQ GYKLAHNATGANLINGLTTALLEHANLFGQLDIDYAILEVDENIIPILLKTCSPTHILALNLFRDQLDRYGEVDTISQRW QAAIAPLPPETTIIVNGDDPTLNDLGQNLSQTVKFFGLNEPDLYLEAIPHAVDSIYCPRCGAPLTYKGVYLSHLGDYHCD SCGFAKNPLDIHSPDWGQILIGVYNKYNTLAAALLAETLGIHRDIINEQIQSFKAAFGRAEELTVQGKSVRILLSKNPVG MNETVRAVTDLQQQGKTSTVLVVLNDRTPDGTDVSWIWDVDLEKLTQSPGKIIISGDRTYDMALRLRYCEGAAELIVEPD LTKALDQAIALSPADQTLHILPTYSAMLEVRQMLTGRKIL
Specific function: Unknown
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48082; Mature: 47951
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILRSVRLAIACGLGKTITAVVRGLKLSAGSVLPGAIARRIFPEILPDLFQQAKKGVIL CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE VVGTNGKTTTSLLIKAILTAQGYKLAHNATGANLINGLTTALLEHANLFGQLDIDYAILE EEECCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEE VDENIIPILLKTCSPTHILALNLFRDQLDRYGEVDTISQRWQAAIAPLPPETTIIVNGDD ECCCEEEHHEECCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCC PTLNDLGQNLSQTVKFFGLNEPDLYLEAIPHAVDSIYCPRCGAPLTYKGVYLSHLGDYHC CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHCCCCCC DSCGFAKNPLDIHSPDWGQILIGVYNKYNTLAAALLAETLGIHRDIINEQIQSFKAAFGR CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AEELTVQGKSVRILLSKNPVGMNETVRAVTDLQQQGKTSTVLVVLNDRTPDGTDVSWIWD CCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEE VDLEKLTQSPGKIIISGDRTYDMALRLRYCEGAAELIVEPDLTKALDQAIALSPADQTLH CCHHHHCCCCCEEEEECCCCEEEEEEEEECCCCCCEEECCCHHHHHHHHHCCCCCCCEEE ILPTYSAMLEVRQMLTGRKIL EEECHHHHHHHHHHHCCCCCC >Mature Secondary Structure AILRSVRLAIACGLGKTITAVVRGLKLSAGSVLPGAIARRIFPEILPDLFQQAKKGVIL HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE VVGTNGKTTTSLLIKAILTAQGYKLAHNATGANLINGLTTALLEHANLFGQLDIDYAILE EEECCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEE VDENIIPILLKTCSPTHILALNLFRDQLDRYGEVDTISQRWQAAIAPLPPETTIIVNGDD ECCCEEEHHEECCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCC PTLNDLGQNLSQTVKFFGLNEPDLYLEAIPHAVDSIYCPRCGAPLTYKGVYLSHLGDYHC CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHCCCCCC DSCGFAKNPLDIHSPDWGQILIGVYNKYNTLAAALLAETLGIHRDIINEQIQSFKAAFGR CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AEELTVQGKSVRILLSKNPVGMNETVRAVTDLQQQGKTSTVLVVLNDRTPDGTDVSWIWD CCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEE VDLEKLTQSPGKIIISGDRTYDMALRLRYCEGAAELIVEPDLTKALDQAIALSPADQTLH CCHHHHCCCCCEEEEECCCCEEEEEEEEECCCCCCEEECCCHHHHHHHHHCCCCCCCEEE ILPTYSAMLEVRQMLTGRKIL EEECHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA