Click here to switch to the map view.

The map label for this gene is 170077498

Identifier: 170077498

GI number: 170077498

Start: 906118

End: 907353

Strand: Direct

Name: 170077498

Synonym: SYNPCC7002_A0876

Alternate gene names: NA

Gene position: 906118-907353 (Clockwise)

Preceding gene: 170077497

Following gene: 170077500

Centisome position: 30.12

GC content: 51.78

Gene sequence:

>1236_bases
ATGGTTCTCCTGCCGATCGCCCCTGGCTGGGGGGTTGCTTGTCTGGGGATTCAAATGATTATGTTGTTAAAACAGGCTGG
ACGGCAATTATGGCAGCAACCGTTAACTTGGATTTTTGGGGCTATTTCAGTTTGGCTATTCGGAGTAACGGCGATCGCCC
CCTATCCTTTGGAATCTTTGTTGGGGGTTGCTAACTTTGTCCCGTTTTTCCTAGTTTTTCTCGCTTTCTCGACCCTCTTC
AATACCCTGGAACGTTTGGAGCGCTTGGCGTGGCTGATTGTGGCCCCTTCTTTGGCGATCGCCGTTTTAGGTTTAGGGGA
GCTTTGGTTTGGCTGGCGGACGCCCCCTCTGATTTGGCAACTGTTTGGCTGGGGTTTGACAGGGGAAGGAAATCCCCCCA
CGCGGTTGTCCTCCACGTTTATGTATGCCAACATTTGCGCCGCCTATCTGCTGATGGCTTTTTTATTGGGGGTGGGTCTG
TGGTTGCGAGATTTCGCTTGGGGAAAGTTACGGCAGTCCCGAATTTTTCTTTATCTCACCGTGACCCTACTCCTCGATGG
TGTTGCCCTGATTTTGACAAATTCCCGGAATGTCTGGGCGATCGCCTTTTTAGGGCTGTTTATCTATGCCATTTATGTGG
GTTGGTGGTGGATTTGTGGCTTTGCAACGGGCTTCGGTACCGCCATTCTCGGCGCATCTTTTGGCCAAACCCCCTGGCGC
GATCCCCTGCGCCAGATTGTGCCTTACTATTTTTGGGGACGTTTATCGGATCAAATGCACCGGGGCCGTGCCATCGAAGA
TCTCCGCATTACCCAATGGCAGTTTGTCCTAGACATGATTCGTCAGCGGCCTTTGACGGGGTGGGGCATCCGCAGTTTTA
CCCCCAGCTATGAAGTGGCGATGAACCGTTGGCTGGGCCACCCCCACAATTTTTATCTGATGCTCACTTCTGAAATTGGC
ATTCCCTTCGCGGCTTTATTGATCGGTACTATTGGCTGGCTCTATGCCCAGGGAGTGTTGGCCTGGCGCAGGTTATCTGA
CCGGGGCGATCGCCTCCTCCTATTTAGTTATCTGATGGCTTTTGGCGGTTATGTTTTGTTCAATACCCTTGATGTGACGG
TGCTCGATTTGCGTTTAAACTTATTTACTTGGCTCCTCCTGAGCGCGATCTGGGGTTTGGGGCAGCAAGTAAATCAGGCC
GGAAATCAAAGTCAAAGCGACAGCCAGCCAGAATAA

Upstream 100 bases:

>100_bases
TGCGGTAGGATTTGAAAGCTGTGGCTCCCTTCCCCTCGGTATGATCAAACATTCGTCAGCCTCAACTTTAGAATATTTAC
CACCCCTAACAGAACTGGGG

Downstream 100 bases:

>100_bases
ACCTAAAGCCAATATTTCCCCTTGGGCGGTAATTGGGTAAATTAACAAGGCGATCGCCGCAATTTGGGTCACTGTTTTCG
CCTTTCCCCAGAGATTTGCC

Product: O-antigen polymerase family protein

Products: NA

Alternate protein names: O-Antigen Polymerase Family Protein; O-Antigen Polymerase Family; Lipid A Core O-Antigen Ligase ; Lipid A Core-O-Antigen Ligase-Like Enyme

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MVLLPIAPGWGVACLGIQMIMLLKQAGRQLWQQPLTWIFGAISVWLFGVTAIAPYPLESLLGVANFVPFFLVFLAFSTLF
NTLERLERLAWLIVAPSLAIAVLGLGELWFGWRTPPLIWQLFGWGLTGEGNPPTRLSSTFMYANICAAYLLMAFLLGVGL
WLRDFAWGKLRQSRIFLYLTVTLLLDGVALILTNSRNVWAIAFLGLFIYAIYVGWWWICGFATGFGTAILGASFGQTPWR
DPLRQIVPYYFWGRLSDQMHRGRAIEDLRITQWQFVLDMIRQRPLTGWGIRSFTPSYEVAMNRWLGHPHNFYLMLTSEIG
IPFAALLIGTIGWLYAQGVLAWRRLSDRGDRLLLFSYLMAFGGYVLFNTLDVTVLDLRLNLFTWLLLSAIWGLGQQVNQA
GNQSQSDSQPE

Sequences:

>Translated_411_residues
MVLLPIAPGWGVACLGIQMIMLLKQAGRQLWQQPLTWIFGAISVWLFGVTAIAPYPLESLLGVANFVPFFLVFLAFSTLF
NTLERLERLAWLIVAPSLAIAVLGLGELWFGWRTPPLIWQLFGWGLTGEGNPPTRLSSTFMYANICAAYLLMAFLLGVGL
WLRDFAWGKLRQSRIFLYLTVTLLLDGVALILTNSRNVWAIAFLGLFIYAIYVGWWWICGFATGFGTAILGASFGQTPWR
DPLRQIVPYYFWGRLSDQMHRGRAIEDLRITQWQFVLDMIRQRPLTGWGIRSFTPSYEVAMNRWLGHPHNFYLMLTSEIG
IPFAALLIGTIGWLYAQGVLAWRRLSDRGDRLLLFSYLMAFGGYVLFNTLDVTVLDLRLNLFTWLLLSAIWGLGQQVNQA
GNQSQSDSQPE
>Mature_411_residues
MVLLPIAPGWGVACLGIQMIMLLKQAGRQLWQQPLTWIFGAISVWLFGVTAIAPYPLESLLGVANFVPFFLVFLAFSTLF
NTLERLERLAWLIVAPSLAIAVLGLGELWFGWRTPPLIWQLFGWGLTGEGNPPTRLSSTFMYANICAAYLLMAFLLGVGL
WLRDFAWGKLRQSRIFLYLTVTLLLDGVALILTNSRNVWAIAFLGLFIYAIYVGWWWICGFATGFGTAILGASFGQTPWR
DPLRQIVPYYFWGRLSDQMHRGRAIEDLRITQWQFVLDMIRQRPLTGWGIRSFTPSYEVAMNRWLGHPHNFYLMLTSEIG
IPFAALLIGTIGWLYAQGVLAWRRLSDRGDRLLLFSYLMAFGGYVLFNTLDVTVLDLRLNLFTWLLLSAIWGLGQQVNQA
GNQSQSDSQPE

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46637; Mature: 46637

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLPIAPGWGVACLGIQMIMLLKQAGRQLWQQPLTWIFGAISVWLFGVTAIAPYPLESL
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LGVANFVPFFLVFLAFSTLFNTLERLERLAWLIVAPSLAIAVLGLGELWFGWRTPPLIWQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LFGWGLTGEGNPPTRLSSTFMYANICAAYLLMAFLLGVGLWLRDFAWGKLRQSRIFLYLT
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTLLLDGVALILTNSRNVWAIAFLGLFIYAIYVGWWWICGFATGFGTAILGASFGQTPWR
HHHHHCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPLRQIVPYYFWGRLSDQMHRGRAIEDLRITQWQFVLDMIRQRPLTGWGIRSFTPSYEVA
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
MNRWLGHPHNFYLMLTSEIGIPFAALLIGTIGWLYAQGVLAWRRLSDRGDRLLLFSYLMA
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FGGYVLFNTLDVTVLDLRLNLFTWLLLSAIWGLGQQVNQAGNQSQSDSQPE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVLLPIAPGWGVACLGIQMIMLLKQAGRQLWQQPLTWIFGAISVWLFGVTAIAPYPLESL
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LGVANFVPFFLVFLAFSTLFNTLERLERLAWLIVAPSLAIAVLGLGELWFGWRTPPLIWQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LFGWGLTGEGNPPTRLSSTFMYANICAAYLLMAFLLGVGLWLRDFAWGKLRQSRIFLYLT
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTLLLDGVALILTNSRNVWAIAFLGLFIYAIYVGWWWICGFATGFGTAILGASFGQTPWR
HHHHHCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPLRQIVPYYFWGRLSDQMHRGRAIEDLRITQWQFVLDMIRQRPLTGWGIRSFTPSYEVA
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
MNRWLGHPHNFYLMLTSEIGIPFAALLIGTIGWLYAQGVLAWRRLSDRGDRLLLFSYLMA
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FGGYVLFNTLDVTVLDLRLNLFTWLLLSAIWGLGQQVNQAGNQSQSDSQPE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA