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The map label for this gene is gidB [H]

Identifier: 170077371

GI number: 170077371

Start: 777395

End: 778144

Strand: Direct

Name: gidB [H]

Synonym: SYNPCC7002_A0748

Alternate gene names: 170077371

Gene position: 777395-778144 (Clockwise)

Preceding gene: 170077370

Following gene: 170077372

Centisome position: 25.84

GC content: 54.13

Gene sequence:

>750_bases
ATGAACGACATCGAAGCCCAATTTCGTAACTTATTTCAACGCTATGGCGATCCTCACCTTTGGCAACCCGATTCCTCCCA
CTATCCGGCCCTTGCTGCCCTTTACCACGGCATTTGCGACGGCAACCAGCGGCTGAATCTGACCCGAATCACGTCTCCAG
AAGACTTTTGGGAAAAACATTTGTGGGATTCCTACGCCGCTTTGAAACTAGACGTATTGGCGGAGCGTTTAACCCAGCCC
CAAAAAGTCATCGATGTGGGCACTGGGGGCGGCTTTCCCGGCATTCCCTTGGCGATCGCCTTTCCTGAGTGGCAAATTAC
CCTGCTCGATGCCACCCGCAAAAAAATTAATTTCCTCGTTGAACTGAGCCAAACCCTCCAACTGAACACCCTTGGCATCG
CTGACCGGGCTGAAACCCTGGGTCAAGACCCAAAATACCGGGAAAGCTATGACATCGCGACGATCCGCGCCGTGGGTAAA
GCCTCCCTCTGTGTGGAATATCTCTTGCCCCTACTCAAAATTGGCGGCCTCGCGGTTCTCTATCGGGGTCAATGGTCTGA
GGCCGAAACAGAACAACTCCAAGGGGCGATCGCCCAATGTGGTGGTCAACTCCTAGCCGTACAGCAATTTACAACCCCAA
TCACCCAAGGCCAGCGCACCTGTCTCTACATCGAGAAAAAACAGACCACAGCCCCCCAATTTCCTAGGGCGATCGGCCTG
CCGAAACAATCCCCCCTCGCCCCGGTTTAA

Upstream 100 bases:

>100_bases
TCCTGGCAATGTGGGCGATCACCACAGTCTCGTCACCGCTTACCAACGCCTCCAAATTCCCAGCCAATCAACAATTTAGG
CTTTATTTTTCCCAGAAACC

Downstream 100 bases:

>100_bases
GCCTTATAGATCAAGCTCCCTGGCCCTCTGTCGAATCTTGTTTACTTAATCCCAAGAGATGGTACCCTGAGTATGGCAAA
TTTTTACATTTGGTTAAAAC

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNDIEAQFRNLFQRYGDPHLWQPDSSHYPALAALYHGICDGNQRLNLTRITSPEDFWEKHLWDSYAALKLDVLAERLTQP
QKVIDVGTGGGFPGIPLAIAFPEWQITLLDATRKKINFLVELSQTLQLNTLGIADRAETLGQDPKYRESYDIATIRAVGK
ASLCVEYLLPLLKIGGLAVLYRGQWSEAETEQLQGAIAQCGGQLLAVQQFTTPITQGQRTCLYIEKKQTTAPQFPRAIGL
PKQSPLAPV

Sequences:

>Translated_249_residues
MNDIEAQFRNLFQRYGDPHLWQPDSSHYPALAALYHGICDGNQRLNLTRITSPEDFWEKHLWDSYAALKLDVLAERLTQP
QKVIDVGTGGGFPGIPLAIAFPEWQITLLDATRKKINFLVELSQTLQLNTLGIADRAETLGQDPKYRESYDIATIRAVGK
ASLCVEYLLPLLKIGGLAVLYRGQWSEAETEQLQGAIAQCGGQLLAVQQFTTPITQGQRTCLYIEKKQTTAPQFPRAIGL
PKQSPLAPV
>Mature_249_residues
MNDIEAQFRNLFQRYGDPHLWQPDSSHYPALAALYHGICDGNQRLNLTRITSPEDFWEKHLWDSYAALKLDVLAERLTQP
QKVIDVGTGGGFPGIPLAIAFPEWQITLLDATRKKINFLVELSQTLQLNTLGIADRAETLGQDPKYRESYDIATIRAVGK
ASLCVEYLLPLLKIGGLAVLYRGQWSEAETEQLQGAIAQCGGQLLAVQQFTTPITQGQRTCLYIEKKQTTAPQFPRAIGL
PKQSPLAPV

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=188, Percent_Identity=28.7234042553192, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: 2.1.-.-

Molecular weight: Translated: 27747; Mature: 27747

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDIEAQFRNLFQRYGDPHLWQPDSSHYPALAALYHGICDGNQRLNLTRITSPEDFWEKH
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
LWDSYAALKLDVLAERLTQPQKVIDVGTGGGFPGIPLAIAFPEWQITLLDATRKKINFLV
HHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCEEEECCCEEEEEEHHHHHHHHHHH
ELSQTLQLNTLGIADRAETLGQDPKYRESYDIATIRAVGKASLCVEYLLPLLKIGGLAVL
HHHHHHEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
YRGQWSEAETEQLQGAIAQCGGQLLAVQQFTTPITQGQRTCLYIEKKQTTAPQFPRAIGL
EECCCCCHHHHHHHHHHHHCCCCEEEHHHHHCHHHCCCEEEEEEECCCCCCCCCCHHHCC
PKQSPLAPV
CCCCCCCCC
>Mature Secondary Structure
MNDIEAQFRNLFQRYGDPHLWQPDSSHYPALAALYHGICDGNQRLNLTRITSPEDFWEKH
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
LWDSYAALKLDVLAERLTQPQKVIDVGTGGGFPGIPLAIAFPEWQITLLDATRKKINFLV
HHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCEEEECCCEEEEEEHHHHHHHHHHH
ELSQTLQLNTLGIADRAETLGQDPKYRESYDIATIRAVGKASLCVEYLLPLLKIGGLAVL
HHHHHHEEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
YRGQWSEAETEQLQGAIAQCGGQLLAVQQFTTPITQGQRTCLYIEKKQTTAPQFPRAIGL
EECCCCCHHHHHHHHHHHHCCCCEEEHHHHHCHHHCCCEEEEEEECCCCCCCCCCHHHCC
PKQSPLAPV
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]