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The map label for this gene is atpD [H]

Identifier: 170077372

GI number: 170077372

Start: 778301

End: 779752

Strand: Direct

Name: atpD [H]

Synonym: SYNPCC7002_A0749

Alternate gene names: 170077372

Gene position: 778301-779752 (Clockwise)

Preceding gene: 170077371

Following gene: 170077373

Centisome position: 25.87

GC content: 51.65

Gene sequence:

>1452_bases
ATGGTAGCTACACAAGAAAAAACTTTAGGTAAAATCACTCAGATCATTGGCCCTGTCATTGACGCAGAGTTCCCCAGTGG
CAAAATGCCTCGGATTTATAACGCTTTAAAAATCCAAGGAAAAAACCCCTACGGTCAAGAAATCAACCTCACCTGTGAAG
TTCAACAGTTGCTCGGCGACAACCAAGTCCGGGCCGTTGCCATGAGCTCCACCGACGGTCTCGTTCGCGGCATGGATATC
CTCGACACTGGTGCTCCCATCAGCGTTCCCGTAGGGAAGAAAACCCTCGGTCGGATTTTCAACGTTCTCGGTGAACCCGT
AGACGAAAAAGGCGAAGTTGGCGCAGAAGAAACTTCTCCGATCCACCGCCCTGCTCCTAAGCTGACCGAACTTGACACAG
CTCCTTCTGTGTTTGAAACGGGCATTAAAGTTGTTGACCTTCTTACTCCCTACCGTCGTGGTGGGAAAATTGGTCTCTTT
GGTGGTGCTGGTGTTGGTAAAACCGTCATCATGATGGAGCTGATCAACAACATCGCCACCAACCACGGTGGTGTGTCTGT
ATTCGCTGGTGTAGGGGAACGGACCCGTGAAGGGAATGACCTTTACAACGAAATGATCGAATCTGGCGTTATCAACCCCG
ATAACCTCAACGATTCCAAGATCGCCCTCGTGTACGGTCAGATGAACGAGCCCCCCGGAGCCCGGATGCGGGTTGGTCTG
TCTGGTTTGACCATGGCGGAATATTTCCGTGATGTAAACAAGCAGGACGTACTGCTTTTCGTTGACAACATTTTCCGCTT
TGTCCAGGCTGGTTCTGAGGTATCGGCACTGCTCGGTCGGATGCCTTCTGCGGTAGGTTATCAGCCCACCCTCGGTACTG
ACGTTGGGGATCTCCAAGAGCGCATTACCTCCACCAAGGAAGGTTCTATCACCTCGATCCAAGCAGTTTATGTTCCTGCG
GATGACTTGACTGACCCTGCTCCGGCAACCACCTTCGCTCACCTCGACGGTACTACTGTACTTTCCCGTGCTTTGGCTTC
CAAAGGGATTTATCCTGCTGTGGATCCCCTTGATTCCACCAGTACAATGCTTCAGCCCAGCATCGTGGGTGAAGACCACT
ACAACACGGCGCGTGCGGTACAGTCTACCCTCCAGCGCTATAAGGAACTCCAGGACATCATCGCGATTCTTGGTTTGGAC
GAACTTTCTGAAGAAGACCGTCTGACCGTAGACCGGGCCCGGAAGATTGAGCGTTTCTTGTCTCAGCCTTTCTTCGTGGC
AGAGGTATTTACCGGTTCTCCTGGTAAGTATGTGACCCTTGAAGAAACCATTGAAGGCTTCAAGCGCATCCTCTCTGGTG
AATTAGATGATCTACCTGAGCAGGCGTTCTACCTCGTTGGCAACATCGAAGAGGCGATCGCCAAAGGCAAGAAGCTCAAA
GAGCAAGGCTAA

Upstream 100 bases:

>100_bases
AGATGGTACCCTGAGTATGGCAAATTTTTACATTTGGTTAAAACTTTAGGAACAAAGCCAGCATTTGGCCTAGAGCGAAA
CCAATCGATAATAGAGAAGC

Downstream 100 bases:

>100_bases
ACCCTGCTTCGCCTAAGACATCAGGTCAGTGCTACCGTTCTGCGGGGTGCTGACCTTGAACGTCAGAATTTTCCTTATTT
TTTGAATTAGATTTAAGCAA

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MVATQEKTLGKITQIIGPVIDAEFPSGKMPRIYNALKIQGKNPYGQEINLTCEVQQLLGDNQVRAVAMSSTDGLVRGMDI
LDTGAPISVPVGKKTLGRIFNVLGEPVDEKGEVGAEETSPIHRPAPKLTELDTAPSVFETGIKVVDLLTPYRRGGKIGLF
GGAGVGKTVIMMELINNIATNHGGVSVFAGVGERTREGNDLYNEMIESGVINPDNLNDSKIALVYGQMNEPPGARMRVGL
SGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERITSTKEGSITSIQAVYVPA
DDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPSIVGEDHYNTARAVQSTLQRYKELQDIIAILGLD
ELSEEDRLTVDRARKIERFLSQPFFVAEVFTGSPGKYVTLEETIEGFKRILSGELDDLPEQAFYLVGNIEEAIAKGKKLK
EQG

Sequences:

>Translated_483_residues
MVATQEKTLGKITQIIGPVIDAEFPSGKMPRIYNALKIQGKNPYGQEINLTCEVQQLLGDNQVRAVAMSSTDGLVRGMDI
LDTGAPISVPVGKKTLGRIFNVLGEPVDEKGEVGAEETSPIHRPAPKLTELDTAPSVFETGIKVVDLLTPYRRGGKIGLF
GGAGVGKTVIMMELINNIATNHGGVSVFAGVGERTREGNDLYNEMIESGVINPDNLNDSKIALVYGQMNEPPGARMRVGL
SGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERITSTKEGSITSIQAVYVPA
DDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPSIVGEDHYNTARAVQSTLQRYKELQDIIAILGLD
ELSEEDRLTVDRARKIERFLSQPFFVAEVFTGSPGKYVTLEETIEGFKRILSGELDDLPEQAFYLVGNIEEAIAKGKKLK
EQG
>Mature_483_residues
MVATQEKTLGKITQIIGPVIDAEFPSGKMPRIYNALKIQGKNPYGQEINLTCEVQQLLGDNQVRAVAMSSTDGLVRGMDI
LDTGAPISVPVGKKTLGRIFNVLGEPVDEKGEVGAEETSPIHRPAPKLTELDTAPSVFETGIKVVDLLTPYRRGGKIGLF
GGAGVGKTVIMMELINNIATNHGGVSVFAGVGERTREGNDLYNEMIESGVINPDNLNDSKIALVYGQMNEPPGARMRVGL
SGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERITSTKEGSITSIQAVYVPA
DDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPSIVGEDHYNTARAVQSTLQRYKELQDIIAILGLD
ELSEEDRLTVDRARKIERFLSQPFFVAEVFTGSPGKYVTLEETIEGFKRILSGELDDLPEQAFYLVGNIEEAIAKGKKLK
EQG

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=473, Percent_Identity=69.1331923890063, Blast_Score=665, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=322, Percent_Identity=29.1925465838509, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI19913428, Length=376, Percent_Identity=26.5957446808511, Blast_Score=109, Evalue=7e-24,
Organism=Homo sapiens, GI19913426, Length=376, Percent_Identity=25.7978723404255, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI50345984, Length=302, Percent_Identity=26.8211920529801, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI4757810, Length=302, Percent_Identity=26.8211920529801, Blast_Score=94, Evalue=4e-19,
Organism=Escherichia coli, GI1790170, Length=470, Percent_Identity=69.1489361702128, Blast_Score=654, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=369, Percent_Identity=26.8292682926829, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1790172, Length=390, Percent_Identity=25.6410256410256, Blast_Score=108, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI25144756, Length=480, Percent_Identity=65.8333333333333, Blast_Score=642, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17510931, Length=367, Percent_Identity=26.9754768392371, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17570191, Length=357, Percent_Identity=26.6106442577031, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17565854, Length=319, Percent_Identity=29.4670846394984, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71988080, Length=302, Percent_Identity=27.1523178807947, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71988063, Length=306, Percent_Identity=27.4509803921569, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71988074, Length=265, Percent_Identity=25.6603773584906, Blast_Score=73, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322581, Length=464, Percent_Identity=67.2413793103448, Blast_Score=639, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=411, Percent_Identity=27.007299270073, Blast_Score=117, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6319370, Length=372, Percent_Identity=25.8064516129032, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320016, Length=239, Percent_Identity=28.4518828451883, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24638766, Length=474, Percent_Identity=67.0886075949367, Blast_Score=648, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=470, Percent_Identity=68.0851063829787, Blast_Score=642, Evalue=0.0,
Organism=Drosophila melanogaster, GI24583988, Length=325, Percent_Identity=29.2307692307692, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583986, Length=325, Percent_Identity=29.2307692307692, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583984, Length=325, Percent_Identity=29.2307692307692, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583992, Length=325, Percent_Identity=28.3076923076923, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI20129479, Length=334, Percent_Identity=27.8443113772455, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI281361666, Length=368, Percent_Identity=26.0869565217391, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24646341, Length=368, Percent_Identity=26.0869565217391, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI17136796, Length=368, Percent_Identity=26.0869565217391, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24638768, Length=96, Percent_Identity=50, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24658560, Length=302, Percent_Identity=25.8278145695364, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 52222; Mature: 52222

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATQEKTLGKITQIIGPVIDAEFPSGKMPRIYNALKIQGKNPYGQEINLTCEVQQLLGD
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEECCCCCCCCEEEEEEHHHHHCC
NQVRAVAMSSTDGLVRGMDILDTGAPISVPVGKKTLGRIFNVLGEPVDEKGEVGAEETSP
CCEEEEEECCCCCHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
IHRPAPKLTELDTAPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIAT
CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHC
NHGGVSVFAGVGERTREGNDLYNEMIESGVINPDNLNDSKIALVYGQMNEPPGARMRVGL
CCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECC
SGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQE
CHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
RITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDST
HHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCC
STMLQPSIVGEDHYNTARAVQSTLQRYKELQDIIAILGLDELSEEDRLTVDRARKIERFL
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHH
SQPFFVAEVFTGSPGKYVTLEETIEGFKRILSGELDDLPEQAFYLVGNIEEAIAKGKKLK
CCCEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCHHCCCHHHHHHHCCHHHHHHCCHHHH
EQG
CCC
>Mature Secondary Structure
MVATQEKTLGKITQIIGPVIDAEFPSGKMPRIYNALKIQGKNPYGQEINLTCEVQQLLGD
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEECCCCCCCCEEEEEEHHHHHCC
NQVRAVAMSSTDGLVRGMDILDTGAPISVPVGKKTLGRIFNVLGEPVDEKGEVGAEETSP
CCEEEEEECCCCCHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
IHRPAPKLTELDTAPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIAT
CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHC
NHGGVSVFAGVGERTREGNDLYNEMIESGVINPDNLNDSKIALVYGQMNEPPGARMRVGL
CCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECC
SGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQE
CHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
RITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDST
HHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCC
STMLQPSIVGEDHYNTARAVQSTLQRYKELQDIIAILGLDELSEEDRLTVDRARKIERFL
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHH
SQPFFVAEVFTGSPGKYVTLEETIEGFKRILSGELDDLPEQAFYLVGNIEEAIAKGKKLK
CCCEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCHHCCCHHHHHHHCCHHHHHHCCHHHH
EQG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA