| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077370
Identifier: 170077370
GI number: 170077370
Start: 776048
End: 777373
Strand: Direct
Name: 170077370
Synonym: SYNPCC7002_A0747
Alternate gene names: NA
Gene position: 776048-777373 (Clockwise)
Preceding gene: 170077369
Following gene: 170077371
Centisome position: 25.8
GC content: 50.9
Gene sequence:
>1326_bases ATGACAGCAAAAATTATTGTGTTTGATGATGACCCGACGGGCTCCCAAACGGTGCATAGTTGTCCATTACTATTGCGTTG GGATGTGGACACGTTGCGGTTGGGTTTACGGGATCCGGCCCCCATTCTATTTATTTTGGCGAATACCCGCGCTTTGACAG AACCAGAGGCGATCGCCACCACCACAGCAGTTTGTCGGAATCTCAAAATTGCCCTGACCCAGGAAAATATCCAGGAATAT CTGATCGTCAGTCGCTCGGATTCCACCTTGAGGGGCCATTTTCCCGCTGAAACCGAGGCGATCGCCAACGTATTAGGGCC GTTTGATGCCTGTTTTTTTGCCCCAGCATTTTTTGAGGGGGGCCGCATTACCCGCAACGGCATTCACTATGTCCAGGAAA ATGAACGCTTGATCCCCGTGGCTGAGACAGAATTTGCGGGCGATCGCCTTTTTGGCTTCCAGAATAGTTTTTTACCCGAT TTCATCGCGACGAAAACCCAGGGCGCAGTGACGGCGGCTCAGGTGGATTGTCTCAGTCCAGGGAATTTACCTGAAACTCT CCTTGACTATTTCCGCGAGCTTCAGAATGGCAAATACGTTGTCCTCGACGGCGAACAACAGGCTGATTTTGATCGTCTAG TTCCGGCGCTATTCCAAGCGATTCACCAAGGCAAAAAGTTTCTCTTTCGCAGTGCCGCCAGTTTGCTTACTTCTCTTGCG GATCTTGGCCCCCAACCGATTCCGCCGGAAAAAAGTTTTACCGTGCGGCGATCGCCCCAACCCGGACTGATTATTGTCGG TTCCCACACACAAAAAACAACTGTACAACTCGCGGAATTACTGCAATTAGCAGGTGTTGTCGGCATTGAAATCGACGTAG AGCTGTGCCAAACATCCCTAGGCCGTGATCAACTAGCAGTAGCGATGCTAGAGCAGATCCCCAAAATTCGCCAAGCCGGA CAAACCCCCGTACTCTTTACCAGTCGGCAAGTGGTGGCCAGCGACCAAGCCCAACATAACCTTGAATTTGGGAAAAATAT CACGGCTCTATTCCTTAAAATTCTTGCCCAGTTGCCCGCAGATCTCGGCTTTGTAATTAGTAAAGGCGGTAACACCACCA ATGCGCTGCTCCAAAAAGGTTTGCGGGTTCCAGTGATCCAATTGCGCGGCCAAATCATCCCTGGTTGTTGCCTCGTGCAA ACGGAGCATGATCACCCACAATTTCCCCTGTTACCCGTGGTACTGTTTCCTGGCAATGTGGGCGATCACCACAGTCTCGT CACCGCTTACCAACGCCTCCAAATTCCCAGCCAATCAACAATTTAG
Upstream 100 bases:
>100_bases CGACGGTGGGACGAGAAATTATTGAGCAAGCCTTGGCCCTAGTGTCCCAGACAAACGCGATCGCCGATCCGGTCTCCATG GTTTCTGGGAGAAAGTGACC
Downstream 100 bases:
>100_bases GCTTTATTTTTCCCAGAAACCATGAACGACATCGAAGCCCAATTTCGTAACTTATTTCAACGCTATGGCGATCCTCACCT TTGGCAACCCGATTCCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTAKIIVFDDDPTGSQTVHSCPLLLRWDVDTLRLGLRDPAPILFILANTRALTEPEAIATTTAVCRNLKIALTQENIQEY LIVSRSDSTLRGHFPAETEAIANVLGPFDACFFAPAFFEGGRITRNGIHYVQENERLIPVAETEFAGDRLFGFQNSFLPD FIATKTQGAVTAAQVDCLSPGNLPETLLDYFRELQNGKYVVLDGEQQADFDRLVPALFQAIHQGKKFLFRSAASLLTSLA DLGPQPIPPEKSFTVRRSPQPGLIIVGSHTQKTTVQLAELLQLAGVVGIEIDVELCQTSLGRDQLAVAMLEQIPKIRQAG QTPVLFTSRQVVASDQAQHNLEFGKNITALFLKILAQLPADLGFVISKGGNTTNALLQKGLRVPVIQLRGQIIPGCCLVQ TEHDHPQFPLLPVVLFPGNVGDHHSLVTAYQRLQIPSQSTI
Sequences:
>Translated_441_residues MTAKIIVFDDDPTGSQTVHSCPLLLRWDVDTLRLGLRDPAPILFILANTRALTEPEAIATTTAVCRNLKIALTQENIQEY LIVSRSDSTLRGHFPAETEAIANVLGPFDACFFAPAFFEGGRITRNGIHYVQENERLIPVAETEFAGDRLFGFQNSFLPD FIATKTQGAVTAAQVDCLSPGNLPETLLDYFRELQNGKYVVLDGEQQADFDRLVPALFQAIHQGKKFLFRSAASLLTSLA DLGPQPIPPEKSFTVRRSPQPGLIIVGSHTQKTTVQLAELLQLAGVVGIEIDVELCQTSLGRDQLAVAMLEQIPKIRQAG QTPVLFTSRQVVASDQAQHNLEFGKNITALFLKILAQLPADLGFVISKGGNTTNALLQKGLRVPVIQLRGQIIPGCCLVQ TEHDHPQFPLLPVVLFPGNVGDHHSLVTAYQRLQIPSQSTI >Mature_440_residues TAKIIVFDDDPTGSQTVHSCPLLLRWDVDTLRLGLRDPAPILFILANTRALTEPEAIATTTAVCRNLKIALTQENIQEYL IVSRSDSTLRGHFPAETEAIANVLGPFDACFFAPAFFEGGRITRNGIHYVQENERLIPVAETEFAGDRLFGFQNSFLPDF IATKTQGAVTAAQVDCLSPGNLPETLLDYFRELQNGKYVVLDGEQQADFDRLVPALFQAIHQGKKFLFRSAASLLTSLAD LGPQPIPPEKSFTVRRSPQPGLIIVGSHTQKTTVQLAELLQLAGVVGIEIDVELCQTSLGRDQLAVAMLEQIPKIRQAGQ TPVLFTSRQVVASDQAQHNLEFGKNITALFLKILAQLPADLGFVISKGGNTTNALLQKGLRVPVIQLRGQIIPGCCLVQT EHDHPQFPLLPVVLFPGNVGDHHSLVTAYQRLQIPSQSTI
Specific function: Unknown
COG id: COG3395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48253; Mature: 48122
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKIIVFDDDPTGSQTVHSCPLLLRWDVDTLRLGLRDPAPILFILANTRALTEPEAIAT CCEEEEEECCCCCCCCHHHCCCEEEEECHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHH TTAVCRNLKIALTQENIQEYLIVSRSDSTLRGHFPAETEAIANVLGPFDACFFAPAFFEG HHHHHHCCEEEEEHHHHHEEEEEECCCCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHCC GRITRNGIHYVQENERLIPVAETEFAGDRLFGFQNSFLPDFIATKTQGAVTAAQVDCLSP CCEECCCCEEEECCCEEEEEECCCCCCCCEECCCCCCCCHHHHCCCCCCEEEEEEEECCC GNLPETLLDYFRELQNGKYVVLDGEQQADFDRLVPALFQAIHQGKKFLFRSAASLLTSLA CCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLGPQPIPPEKSFTVRRSPQPGLIIVGSHTQKTTVQLAELLQLAGVVGIEIDVELCQTSL HCCCCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHC GRDQLAVAMLEQIPKIRQAGQTPVLFTSRQVVASDQAQHNLEFGKNITALFLKILAQLPA CHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCC DLGFVISKGGNTTNALLQKGLRVPVIQLRGQIIPGCCLVQTEHDHPQFPLLPVVLFPGNV CCCEEEECCCCHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCC GDHHSLVTAYQRLQIPSQSTI CCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TAKIIVFDDDPTGSQTVHSCPLLLRWDVDTLRLGLRDPAPILFILANTRALTEPEAIAT CEEEEEECCCCCCCCHHHCCCEEEEECHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHH TTAVCRNLKIALTQENIQEYLIVSRSDSTLRGHFPAETEAIANVLGPFDACFFAPAFFEG HHHHHHCCEEEEEHHHHHEEEEEECCCCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHCC GRITRNGIHYVQENERLIPVAETEFAGDRLFGFQNSFLPDFIATKTQGAVTAAQVDCLSP CCEECCCCEEEECCCEEEEEECCCCCCCCEECCCCCCCCHHHHCCCCCCEEEEEEEECCC GNLPETLLDYFRELQNGKYVVLDGEQQADFDRLVPALFQAIHQGKKFLFRSAASLLTSLA CCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLGPQPIPPEKSFTVRRSPQPGLIIVGSHTQKTTVQLAELLQLAGVVGIEIDVELCQTSL HCCCCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHC GRDQLAVAMLEQIPKIRQAGQTPVLFTSRQVVASDQAQHNLEFGKNITALFLKILAQLPA CHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCC DLGFVISKGGNTTNALLQKGLRVPVIQLRGQIIPGCCLVQTEHDHPQFPLLPVVLFPGNV CCCEEEECCCCHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCC GDHHSLVTAYQRLQIPSQSTI CCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA