| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yjeF [C]
Identifier: 170077271
GI number: 170077271
Start: 677567
End: 679102
Strand: Reverse
Name: yjeF [C]
Synonym: SYNPCC7002_A0648
Alternate gene names: 170077271
Gene position: 679102-677567 (Counterclockwise)
Preceding gene: 170077272
Following gene: 170077268
Centisome position: 22.58
GC content: 49.67
Gene sequence:
>1536_bases ATGCTTGAGCTTGACCAGATTTTTGTCACTGCTGCCCAAATGCAGCACCTTGAAACAGCAATTTTTAACCAAGGAATGCC GACCCCAGCTCTTATGGAAAAGGCGGCGGGGTTAATTGCCCAATATATTCAAAATCATTATCCTTTAAAAAATTATCGAA AAATTAGTGTTTTAGTGGGGCCTGGTCACAATGGTGGCGATGCCTTAGTTGTTGCACGGGAGTTATCTTTTGCAGGCTAT AAATTATGCTTATTTCATCCCCTAGAAAAGCTAAAATTCCTCACCCAAAGCCACTGGGATTATGCACAATTTTTAGGAAT TTCCCATACAAAAGATCTTGATATTTTTCTGGAAAGTCATTTGATCATTGATGGTTTATTTGGCTTTGGTTTAACGCGGC CGATTACGGGAGATTTAGGTTTATTAATCGATGAACTGAATGAATCAGGACGGCCCATTGTCAGTATTGATTTGCCTTCG GGGCTCCATACCGATACCGGGGCGGTGTTGGGTACAGCGATTCAAGCAACGGAAAGTCTCTGCTTAGGGCTTTGGAAACG GGCCTACGGCCAGGATGTTGCCACGCCTTATCTAGGTAAAGTTAACCGCCTTGATTTTGGTATTCCCTCCCATTTAATTG CAGAAACTTTATCCGCCAAAAATACGATTCAAGGCATTCCCCAAAGCTTGTTACAACGTTTGTTACCCCTGGGGCGATCG CCGTTAACCCACAAATACAAACAGGGCCATTTATTGCTCATTGGTGGCTCCCAAACTTATCTGGGAAGTGTGCTGCTGGC GGCTTTGGGGGCGCGAGCAACGGGGATTGGCATGCTCACCATTGCGGTGCCAGAATCCCTGAAATTATTGGTGGTGGCCC AACTGCCGGAAGCCTTGGTGCTTGGTTGCCCAGAAGATGAAACGGGGGCGATCGCCCAACTGCCAAGCCTAGACTTTTCC CGATACCAAGCGGTGGCCTGTGGCTGTGGTTTGACCCTTGCGGGGGCGACTAATTTAATGCCCGATCTCACGCCGCGGGA AGTGCCTCTAGTGTTAGACGCCGATGCCCTCAATTGGCTGGCCGAGGAAGATCTAGAAGTGCTTCAAAACCGCCATTTCC CCACAATTTTAACGCCCCATCTCGGCGAATTTAAGCGTCTATTTGCTGACCAAATCCCCATCACCGCCGACCGATTCCAG ATGACCCAAAAGGCGGCCCAACTGACCGGGGCGATCGCCCTTTTGAAGGGGGCAAAAACTGTTATTGCCCGTCCCGATGG CGTGACCCATTGCATTACAGAAAGTACCCCAGCTTTAGCTAGAGGCGGTAGTGGCGATGTTCTCCTTGGTTTAATCGGTG GCCTTTTGGCCCAACATCCAGAAGCACCCTTAGAGGTCGCTACAGCAGCCGCTTGGTGGCACGCCCAGGCCGGAATTCGC GCCGCCCAGGCCAGAACTGTTGCCGGGGTTGATGGGGTCACGTTGGCGGAATTTCTCGTTGAAGTTTTACAGCAATGGCA AACAAAATCTGTCTGA
Upstream 100 bases:
>100_bases GTTTTTTCCGTCGCCATTGGGTTTTGGGCAAGAGCCATGGCATTACCGAAAAATGAGTATTTTAAAAGTTAATTGACCCT TTACCGTTATCTAGAGAAAA
Downstream 100 bases:
>100_bases GCGTAAAAGAAATAAGCTAGGGAGACGGTTGAAAAACTTGCAGCAAAATCTTTAGGGGCGGTTTTTGCCAGTAATCAATG TGGGAGACGATCAAGTTATC
Product: carbohydrate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MLELDQIFVTAAQMQHLETAIFNQGMPTPALMEKAAGLIAQYIQNHYPLKNYRKISVLVGPGHNGGDALVVARELSFAGY KLCLFHPLEKLKFLTQSHWDYAQFLGISHTKDLDIFLESHLIIDGLFGFGLTRPITGDLGLLIDELNESGRPIVSIDLPS GLHTDTGAVLGTAIQATESLCLGLWKRAYGQDVATPYLGKVNRLDFGIPSHLIAETLSAKNTIQGIPQSLLQRLLPLGRS PLTHKYKQGHLLLIGGSQTYLGSVLLAALGARATGIGMLTIAVPESLKLLVVAQLPEALVLGCPEDETGAIAQLPSLDFS RYQAVACGCGLTLAGATNLMPDLTPREVPLVLDADALNWLAEEDLEVLQNRHFPTILTPHLGEFKRLFADQIPITADRFQ MTQKAAQLTGAIALLKGAKTVIARPDGVTHCITESTPALARGGSGDVLLGLIGGLLAQHPEAPLEVATAAAWWHAQAGIR AAQARTVAGVDGVTLAEFLVEVLQQWQTKSV
Sequences:
>Translated_511_residues MLELDQIFVTAAQMQHLETAIFNQGMPTPALMEKAAGLIAQYIQNHYPLKNYRKISVLVGPGHNGGDALVVARELSFAGY KLCLFHPLEKLKFLTQSHWDYAQFLGISHTKDLDIFLESHLIIDGLFGFGLTRPITGDLGLLIDELNESGRPIVSIDLPS GLHTDTGAVLGTAIQATESLCLGLWKRAYGQDVATPYLGKVNRLDFGIPSHLIAETLSAKNTIQGIPQSLLQRLLPLGRS PLTHKYKQGHLLLIGGSQTYLGSVLLAALGARATGIGMLTIAVPESLKLLVVAQLPEALVLGCPEDETGAIAQLPSLDFS RYQAVACGCGLTLAGATNLMPDLTPREVPLVLDADALNWLAEEDLEVLQNRHFPTILTPHLGEFKRLFADQIPITADRFQ MTQKAAQLTGAIALLKGAKTVIARPDGVTHCITESTPALARGGSGDVLLGLIGGLLAQHPEAPLEVATAAAWWHAQAGIR AAQARTVAGVDGVTLAEFLVEVLQQWQTKSV >Mature_511_residues MLELDQIFVTAAQMQHLETAIFNQGMPTPALMEKAAGLIAQYIQNHYPLKNYRKISVLVGPGHNGGDALVVARELSFAGY KLCLFHPLEKLKFLTQSHWDYAQFLGISHTKDLDIFLESHLIIDGLFGFGLTRPITGDLGLLIDELNESGRPIVSIDLPS GLHTDTGAVLGTAIQATESLCLGLWKRAYGQDVATPYLGKVNRLDFGIPSHLIAETLSAKNTIQGIPQSLLQRLLPLGRS PLTHKYKQGHLLLIGGSQTYLGSVLLAALGARATGIGMLTIAVPESLKLLVVAQLPEALVLGCPEDETGAIAQLPSLDFS RYQAVACGCGLTLAGATNLMPDLTPREVPLVLDADALNWLAEEDLEVLQNRHFPTILTPHLGEFKRLFADQIPITADRFQ MTQKAAQLTGAIALLKGAKTVIARPDGVTHCITESTPALARGGSGDVLLGLIGGLLAQHPEAPLEVATAAAWWHAQAGIR AAQARTVAGVDGVTLAEFLVEVLQQWQTKSV
Specific function: Unknown
COG id: COG0063
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI91984773, Length=174, Percent_Identity=28.735632183908, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1790609, Length=455, Percent_Identity=30.7692307692308, Blast_Score=144, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17554656, Length=276, Percent_Identity=28.6231884057971, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17509719, Length=163, Percent_Identity=34.9693251533742, Blast_Score=70, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324129, Length=161, Percent_Identity=31.055900621118, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI221329809, Length=177, Percent_Identity=27.1186440677966, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 [H]
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]
EC number: NA
Molecular weight: Translated: 54804; Mature: 54804
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELDQIFVTAAQMQHLETAIFNQGMPTPALMEKAAGLIAQYIQNHYPLKNYRKISVLVG CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE PGHNGGDALVVARELSFAGYKLCLFHPLEKLKFLTQSHWDYAQFLGISHTKDLDIFLESH CCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHH LIIDGLFGFGLTRPITGDLGLLIDELNESGRPIVSIDLPSGLHTDTGAVLGTAIQATESL HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH CLGLWKRAYGQDVATPYLGKVNRLDFGIPSHLIAETLSAKNTIQGIPQSLLQRLLPLGRS HHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLTHKYKQGHLLLIGGSQTYLGSVLLAALGARATGIGMLTIAVPESLKLLVVAQLPEALV CCCCHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCHHHE LGCPEDETGAIAQLPSLDFSRYQAVACGCGLTLAGATNLMPDLTPREVPLVLDADALNWL EECCCCCCCCEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEECHHHHHH AEEDLEVLQNRHFPTILTPHLGEFKRLFADQIPITADRFQMTQKAAQLTGAIALLKGAKT HHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE VIARPDGVTHCITESTPALARGGSGDVLLGLIGGLLAQHPEAPLEVATAAAWWHAQAGIR EEECCCCCEEECCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCH AAQARTVAGVDGVTLAEFLVEVLQQWQTKSV HHHHHEECCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLELDQIFVTAAQMQHLETAIFNQGMPTPALMEKAAGLIAQYIQNHYPLKNYRKISVLVG CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE PGHNGGDALVVARELSFAGYKLCLFHPLEKLKFLTQSHWDYAQFLGISHTKDLDIFLESH CCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHH LIIDGLFGFGLTRPITGDLGLLIDELNESGRPIVSIDLPSGLHTDTGAVLGTAIQATESL HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH CLGLWKRAYGQDVATPYLGKVNRLDFGIPSHLIAETLSAKNTIQGIPQSLLQRLLPLGRS HHHHHHHHHCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLTHKYKQGHLLLIGGSQTYLGSVLLAALGARATGIGMLTIAVPESLKLLVVAQLPEALV CCCCHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCHHHE LGCPEDETGAIAQLPSLDFSRYQAVACGCGLTLAGATNLMPDLTPREVPLVLDADALNWL EECCCCCCCCEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEECHHHHHH AEEDLEVLQNRHFPTILTPHLGEFKRLFADQIPITADRFQMTQKAAQLTGAIALLKGAKT HHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE VIARPDGVTHCITESTPALARGGSGDVLLGLIGGLLAQHPEAPLEVATAAAWWHAQAGIR EEECCCCCEEECCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCH AAQARTVAGVDGVTLAEFLVEVLQQWQTKSV HHHHHEECCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]