| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is mutL [H]
Identifier: 170077272
GI number: 170077272
Start: 679147
End: 680844
Strand: Reverse
Name: mutL [H]
Synonym: SYNPCC7002_A0649
Alternate gene names: 170077272
Gene position: 680844-679147 (Counterclockwise)
Preceding gene: 170077273
Following gene: 170077271
Centisome position: 22.63
GC content: 47.23
Gene sequence:
>1698_bases ATGGCCAATATCAAACAACTCCCTAATGATGTCATCCAGTTAATTGCGGCTGGTGAAGTGATTGATTCCCTGGCAGCGGT GGTACGGGAGTTGGCAGAAAATGCCATTGATGCCGGGGCGACACGCATTAACATCGATATTCAGCCCCAACGTTGGCAAA TTCGCGTTGTAGATAATGGTCAGGGAATGGATCTGGAGGATTTGCAACAGTGCGCCCTCCCCCACCGGACAAGTAAGATT GGCGATCGCCAAGATTTAGCCCACATCAAAAGCCTCGGATTCCGGGGGGAAGCCCTCCACAGCATTGCTCAGGTGGCGAA ACTTACCATCGCCAGTTGTCAAGATGGACAACCCGGTTATCAACTCACAGTGCAGCAAAATCATGTTTCGGAACCACTCC TCAAGCCAATGGCCGTGGGAACGATGGTGACGGTGACAGACATTTTTCAGAATTTTCCGGTGCGACGCCATGCCTTACCG GCGATCGCCCAGCAGCTCAAAACCGCCCAGCAGATGATTTATCATTTGGCCCTAGGTCAGCCACAAATTACCTGGCAAGT CAACCAAAATAATCAGCCCTGGTTTGTCATTAGTGCAGGAAAAAATGCCCAGGAGATTTTGCCGCAACTGCTAAGATCAA TTAGTATTCAAGACTTGATTTTTCAACGCTATCAAGCCACAGATTTTTTGACAGAAAATAATTCTGATTATGCAACAAGT TATTTGGAAGTAGTCCTCGGTTTACCAGACCGTTGTCACCGCCACCAGGCCGATTGGTTAAAGTTGGCAATTAACGGCAG AATTGTTAAATTTTCGGCTTTAGAACAGGCGATCATGAAAGGATTTAGTCGTACTCTTCCCCGCGATCGCCACCCCATCT GTTTTGTCCATCTCCATGTCCCACCAGAACACATCGACTGGAATCGTCATCCCGCAAAAAGCGAAATTTATCTACAACAT CAAACCCTCTGGCAAGAGATTATTCCGCAGGCGATCGCCAAAGGTTTAAGCTTCAGCGAGGCTAATCTACCACGCTTAGA AAATCAGCGGGTTTTAAGTCTTATTCAAGCAGCAGAAAAAAAAGAGAACTATTCTATTGAGCCTCCCTCTGAACATTCAA CGACAAGCGCATCAAATCCACACAAAAAAGTCTTAAAAGTCATTGGCCAAGCCCGCAATACTTATATCATTACGGAACAT CCCGATGGCATCTGGCTAGTAGAGCAGCACATTGCCGACGAACGGGCAATTTATGAAGACTTATGCAAAAATTGGCAGCT TATTTCTCCGATTCAACCCGTGCTGCTAAATGACTTATCACCAAAACAAATAGAGCAACTAACAGACCAACTGGGTTTGG ATCTCGAAATTTTTGGGGAAAATGTTTGGCGAGTCAATACGATTCCTCGGGCTTTGCAAGGCCATTCTGATCTAGAAGCT GCTTTACTAGAATTGAGTCGGGGGGGAGATCTTGAGGCCGCCCAAGTGGCGATCGCCTGCCGGACTGCTGTCCGTAATGG CACACCGCTAGATTTCCCGACCATGCAAACAATCATTGATCGCTGGCAACAGTGCGAAAACCCAAGTACCTGTCCCCACG GTCGACCCATTTATCTGGCCCTAGAAGAAACATCCCTTTATCGTTTTTTCCGTCGCCATTGGGTTTTGGGCAAGAGCCAT GGCATTACCGAAAAATGA
Upstream 100 bases:
>100_bases TTCATCAAAAGTGAGTGCTAAGTTATTAAAGCCTGGTCTTAAATTACTGAGATCTTAGTCATAACTTGATCGTCAAAAAT AAATAATTACTCAGCACTAA
Downstream 100 bases:
>100_bases GTATTTTAAAAGTTAATTGACCCTTTACCGTTATCTAGAGAAAAATGCTTGAGCTTGACCAGATTTTTGTCACTGCTGCC CAAATGCAGCACCTTGAAAC
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MANIKQLPNDVIQLIAAGEVIDSLAAVVRELAENAIDAGATRINIDIQPQRWQIRVVDNGQGMDLEDLQQCALPHRTSKI GDRQDLAHIKSLGFRGEALHSIAQVAKLTIASCQDGQPGYQLTVQQNHVSEPLLKPMAVGTMVTVTDIFQNFPVRRHALP AIAQQLKTAQQMIYHLALGQPQITWQVNQNNQPWFVISAGKNAQEILPQLLRSISIQDLIFQRYQATDFLTENNSDYATS YLEVVLGLPDRCHRHQADWLKLAINGRIVKFSALEQAIMKGFSRTLPRDRHPICFVHLHVPPEHIDWNRHPAKSEIYLQH QTLWQEIIPQAIAKGLSFSEANLPRLENQRVLSLIQAAEKKENYSIEPPSEHSTTSASNPHKKVLKVIGQARNTYIITEH PDGIWLVEQHIADERAIYEDLCKNWQLISPIQPVLLNDLSPKQIEQLTDQLGLDLEIFGENVWRVNTIPRALQGHSDLEA ALLELSRGGDLEAAQVAIACRTAVRNGTPLDFPTMQTIIDRWQQCENPSTCPHGRPIYLALEETSLYRFFRRHWVLGKSH GITEK
Sequences:
>Translated_565_residues MANIKQLPNDVIQLIAAGEVIDSLAAVVRELAENAIDAGATRINIDIQPQRWQIRVVDNGQGMDLEDLQQCALPHRTSKI GDRQDLAHIKSLGFRGEALHSIAQVAKLTIASCQDGQPGYQLTVQQNHVSEPLLKPMAVGTMVTVTDIFQNFPVRRHALP AIAQQLKTAQQMIYHLALGQPQITWQVNQNNQPWFVISAGKNAQEILPQLLRSISIQDLIFQRYQATDFLTENNSDYATS YLEVVLGLPDRCHRHQADWLKLAINGRIVKFSALEQAIMKGFSRTLPRDRHPICFVHLHVPPEHIDWNRHPAKSEIYLQH QTLWQEIIPQAIAKGLSFSEANLPRLENQRVLSLIQAAEKKENYSIEPPSEHSTTSASNPHKKVLKVIGQARNTYIITEH PDGIWLVEQHIADERAIYEDLCKNWQLISPIQPVLLNDLSPKQIEQLTDQLGLDLEIFGENVWRVNTIPRALQGHSDLEA ALLELSRGGDLEAAQVAIACRTAVRNGTPLDFPTMQTIIDRWQQCENPSTCPHGRPIYLALEETSLYRFFRRHWVLGKSH GITEK >Mature_564_residues ANIKQLPNDVIQLIAAGEVIDSLAAVVRELAENAIDAGATRINIDIQPQRWQIRVVDNGQGMDLEDLQQCALPHRTSKIG DRQDLAHIKSLGFRGEALHSIAQVAKLTIASCQDGQPGYQLTVQQNHVSEPLLKPMAVGTMVTVTDIFQNFPVRRHALPA IAQQLKTAQQMIYHLALGQPQITWQVNQNNQPWFVISAGKNAQEILPQLLRSISIQDLIFQRYQATDFLTENNSDYATSY LEVVLGLPDRCHRHQADWLKLAINGRIVKFSALEQAIMKGFSRTLPRDRHPICFVHLHVPPEHIDWNRHPAKSEIYLQHQ TLWQEIIPQAIAKGLSFSEANLPRLENQRVLSLIQAAEKKENYSIEPPSEHSTTSASNPHKKVLKVIGQARNTYIITEHP DGIWLVEQHIADERAIYEDLCKNWQLISPIQPVLLNDLSPKQIEQLTDQLGLDLEIFGENVWRVNTIPRALQGHSDLEAA LLELSRGGDLEAAQVAIACRTAVRNGTPLDFPTMQTIIDRWQQCENPSTCPHGRPIYLALEETSLYRFFRRHWVLGKSHG ITEK
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=347, Percent_Identity=28.5302593659942, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI189458898, Length=338, Percent_Identity=26.0355029585799, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI4505911, Length=338, Percent_Identity=26.0355029585799, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI189458896, Length=328, Percent_Identity=27.7439024390244, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI4505913, Length=370, Percent_Identity=26.7567567567568, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI310128478, Length=370, Percent_Identity=26.7567567567568, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI91992160, Length=195, Percent_Identity=32.3076923076923, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI91992162, Length=195, Percent_Identity=32.3076923076923, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI310128480, Length=317, Percent_Identity=24.9211356466877, Blast_Score=79, Evalue=9e-15, Organism=Escherichia coli, GI1790612, Length=340, Percent_Identity=30.5882352941176, Blast_Score=140, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71991825, Length=321, Percent_Identity=29.595015576324, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17562796, Length=372, Percent_Identity=23.6559139784946, Blast_Score=106, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6323819, Length=339, Percent_Identity=28.3185840707965, Blast_Score=120, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6324247, Length=369, Percent_Identity=26.5582655826558, Blast_Score=116, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6325093, Length=378, Percent_Identity=25.1322751322751, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI17136968, Length=354, Percent_Identity=28.5310734463277, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI17136970, Length=160, Percent_Identity=36.875, Blast_Score=93, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 63853; Mature: 63722
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIKQLPNDVIQLIAAGEVIDSLAAVVRELAENAIDAGATRINIDIQPQRWQIRVVDNG CCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEECC QGMDLEDLQQCALPHRTSKIGDRQDLAHIKSLGFRGEALHSIAQVAKLTIASCQDGQPGY CCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCE QLTVQQNHVSEPLLKPMAVGTMVTVTDIFQNFPVRRHALPAIAQQLKTAQQMIYHLALGQ EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PQITWQVNQNNQPWFVISAGKNAQEILPQLLRSISIQDLIFQRYQATDFLTENNSDYATS CEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH YLEVVLGLPDRCHRHQADWLKLAINGRIVKFSALEQAIMKGFSRTLPRDRHPICFVHLHV HHHHHHCCCHHHHHCCCCEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC PPEHIDWNRHPAKSEIYLQHQTLWQEIIPQAIAKGLSFSEANLPRLENQRVLSLIQAAEK CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH KENYSIEPPSEHSTTSASNPHKKVLKVIGQARNTYIITEHPDGIWLVEQHIADERAIYED CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEHHHHHHHHHHHHH LCKNWQLISPIQPVLLNDLSPKQIEQLTDQLGLDLEIFGENVWRVNTIPRALQGHSDLEA HHCCCEECCCCHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCEEECCCHHHHCCCCHHHH ALLELSRGGDLEAAQVAIACRTAVRNGTPLDFPTMQTIIDRWQQCENPSTCPHGRPIYLA HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE LEETSLYRFFRRHWVLGKSHGITEK ECHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ANIKQLPNDVIQLIAAGEVIDSLAAVVRELAENAIDAGATRINIDIQPQRWQIRVVDNG CCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEECC QGMDLEDLQQCALPHRTSKIGDRQDLAHIKSLGFRGEALHSIAQVAKLTIASCQDGQPGY CCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCE QLTVQQNHVSEPLLKPMAVGTMVTVTDIFQNFPVRRHALPAIAQQLKTAQQMIYHLALGQ EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PQITWQVNQNNQPWFVISAGKNAQEILPQLLRSISIQDLIFQRYQATDFLTENNSDYATS CEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH YLEVVLGLPDRCHRHQADWLKLAINGRIVKFSALEQAIMKGFSRTLPRDRHPICFVHLHV HHHHHHCCCHHHHHCCCCEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC PPEHIDWNRHPAKSEIYLQHQTLWQEIIPQAIAKGLSFSEANLPRLENQRVLSLIQAAEK CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH KENYSIEPPSEHSTTSASNPHKKVLKVIGQARNTYIITEHPDGIWLVEQHIADERAIYED CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEHHHHHHHHHHHHH LCKNWQLISPIQPVLLNDLSPKQIEQLTDQLGLDLEIFGENVWRVNTIPRALQGHSDLEA HHCCCEECCCCHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCEEECCCHHHHCCCCHHHH ALLELSRGGDLEAAQVAIACRTAVRNGTPLDFPTMQTIIDRWQQCENPSTCPHGRPIYLA HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE LEETSLYRFFRRHWVLGKSHGITEK ECHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA