| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077263
Identifier: 170077263
GI number: 170077263
Start: 671840
End: 672355
Strand: Reverse
Name: 170077263
Synonym: SYNPCC7002_A0640
Alternate gene names: NA
Gene position: 672355-671840 (Counterclockwise)
Preceding gene: 170077264
Following gene: 170077261
Centisome position: 22.35
GC content: 50.78
Gene sequence:
>516_bases ATGAACCATGCTTGGGCGATCGCCCTTCTAGGGGTTTTGTGTATCGGCTGCCAGAGTACCAGTTTTGTGACGCCCCCAGC CGACCCCCTTGGCAATAATCTCAATAGTCTCCACAGCGAAAAAAATCCCCGCCTTTCCGATGAAGGCCGTTATCTAGTCT TTAGTAGCGATCGCCGCCAACAACGGCGTATTTTTTTGTATGATCTCGCCCAACGTAAGCTTTTGCCCCTGCCCGGTTTA AACCAACCCAATGTGTTCTATGACCAGCCAGACATTAGCCGCAATGGTCGCTTCATTGTCTACACTTCCGAGCAGGAAGG AAAAACCAATATTTATCTCTACGACCGCCAAGCGTTCCAGAGCCAAAATCTGACCCGTACCTACATCGGTCAAGTGCGTA ATCCTACCGTTAGCGGCGATGGTCGTTGGGTCGCCTTTGAAGGCGATCGCACGGGGCAATGGGATATTGAAGTGATTGAT CGCGGTGTTCAACCGGATTTAGTCGAAGCAGAATGA
Upstream 100 bases:
>100_bases ATCGCGTTTCCCTGGTGCGCTGGGCGTTACAGTGGGGGAAAGTGTGCCTGGATAATGTGAACTGTTGTGCCCTCCCGAAT CAGTCCGCTACCTCAGATTC
Downstream 100 bases:
>100_bases ACCAAACCCCAAGATCTGCTCCTGTTCGGTCTTGAGGTTGAAATTTATGTATTGTGCAAGGAATTGAAGTCTTGCCCTCA ATCGAGCCATAGGCCTACAG
Product: WD-40-like beta propeller repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNHAWAIALLGVLCIGCQSTSFVTPPADPLGNNLNSLHSEKNPRLSDEGRYLVFSSDRRQQRRIFLYDLAQRKLLPLPGL NQPNVFYDQPDISRNGRFIVYTSEQEGKTNIYLYDRQAFQSQNLTRTYIGQVRNPTVSGDGRWVAFEGDRTGQWDIEVID RGVQPDLVEAE
Sequences:
>Translated_171_residues MNHAWAIALLGVLCIGCQSTSFVTPPADPLGNNLNSLHSEKNPRLSDEGRYLVFSSDRRQQRRIFLYDLAQRKLLPLPGL NQPNVFYDQPDISRNGRFIVYTSEQEGKTNIYLYDRQAFQSQNLTRTYIGQVRNPTVSGDGRWVAFEGDRTGQWDIEVID RGVQPDLVEAE >Mature_171_residues MNHAWAIALLGVLCIGCQSTSFVTPPADPLGNNLNSLHSEKNPRLSDEGRYLVFSSDRRQQRRIFLYDLAQRKLLPLPGL NQPNVFYDQPDISRNGRFIVYTSEQEGKTNIYLYDRQAFQSQNLTRTYIGQVRNPTVSGDGRWVAFEGDRTGQWDIEVID RGVQPDLVEAE
Specific function: Unknown
COG id: COG0823
COG function: function code U; Periplasmic component of the Tol biopolymer transport system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19504; Mature: 19504
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHAWAIALLGVLCIGCQSTSFVTPPADPLGNNLNSLHSEKNPRLSDEGRYLVFSSDRRQ CCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCC QRRIFLYDLAQRKLLPLPGLNQPNVFYDQPDISRNGRFIVYTSEQEGKTNIYLYDRQAFQ HHEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEEEEECHHHC SQNLTRTYIGQVRNPTVSGDGRWVAFEGDRTGQWDIEVIDRGVQPDLVEAE CCCCCHHHHHCCCCCEECCCCCEEEEECCCCCCEEHHEECCCCCCCEECCC >Mature Secondary Structure MNHAWAIALLGVLCIGCQSTSFVTPPADPLGNNLNSLHSEKNPRLSDEGRYLVFSSDRRQ CCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCC QRRIFLYDLAQRKLLPLPGLNQPNVFYDQPDISRNGRFIVYTSEQEGKTNIYLYDRQAFQ HHEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEEEEECHHHC SQNLTRTYIGQVRNPTVSGDGRWVAFEGDRTGQWDIEVIDRGVQPDLVEAE CCCCCHHHHHCCCCCEECCCCCEEEEECCCCCCEEHHEECCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA