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The map label for this gene is ompR [C]

Identifier: 170077264

GI number: 170077264

Start: 672352

End: 672627

Strand: Reverse

Name: ompR [C]

Synonym: SYNPCC7002_A0641

Alternate gene names: 170077264

Gene position: 672627-672352 (Counterclockwise)

Preceding gene: 170077265

Following gene: 170077263

Centisome position: 22.36

GC content: 52.54

Gene sequence:

>276_bases
ATGGCTACGGAAAAGACGGCAAGTGAAGCGGCTTTATCGGAACGGGAGATCGAAATTGTCGATTTGGTGGCAGCGGGTCT
GACGAACCATGAGATTGCGGCGCGCCTCGACATTAGCAAGCGCACGGTGGACAACCACATTAGTAATATTTTGACAAAAA
CGGCGACGGATAATCGCGTTTCCCTGGTGCGCTGGGCGTTACAGTGGGGGAAAGTGTGCCTGGATAATGTGAACTGTTGT
GCCCTCCCGAATCAGTCCGCTACCTCAGATTCATGA

Upstream 100 bases:

>100_bases
ATCTTTAGTTGTCTGGGGGAGGGAATTGTGTACAATCTAGCCAATGTGAAAACCTCCCCTACAATAGGAAAATAACAATA
CACAGACAAAAGAAGGGTCT

Downstream 100 bases:

>100_bases
ACCATGCTTGGGCGATCGCCCTTCTAGGGGTTTTGTGTATCGGCTGCCAGAGTACCAGTTTTGTGACGCCCCCAGCCGAC
CCCCTTGGCAATAATCTCAA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator LuxR Family; LuxR Transcriptional Regulator; Regulatory Protein LuxR; Transcriptional Regulator LuxR Family Protein; Two Component LuxR Family Transcriptional Regulator; Response Regulator Like-Protein; LuxR Family Two Component Transcriptional Regulator; LuxR Family Transcriptional Regulatory Protein; Two Component Transcriptional Regulator LuxR Family; Bacterial Regulatory Protein LuxR Family; Sigma-70 Region 4 Family

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MATEKTASEAALSEREIEIVDLVAAGLTNHEIAARLDISKRTVDNHISNILTKTATDNRVSLVRWALQWGKVCLDNVNCC
ALPNQSATSDS

Sequences:

>Translated_91_residues
MATEKTASEAALSEREIEIVDLVAAGLTNHEIAARLDISKRTVDNHISNILTKTATDNRVSLVRWALQWGKVCLDNVNCC
ALPNQSATSDS
>Mature_90_residues
ATEKTASEAALSEREIEIVDLVAAGLTNHEIAARLDISKRTVDNHISNILTKTATDNRVSLVRWALQWGKVCLDNVNCCA
LPNQSATSDS

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9880; Mature: 9749

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEKTASEAALSEREIEIVDLVAAGLTNHEIAARLDISKRTVDNHISNILTKTATDNRV
CCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHH
SLVRWALQWGKVCLDNVNCCALPNQSATSDS
HHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
ATEKTASEAALSEREIEIVDLVAAGLTNHEIAARLDISKRTVDNHISNILTKTATDNRV
CCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHH
SLVRWALQWGKVCLDNVNCCALPNQSATSDS
HHHHHHHHHHHHHHCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA