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The map label for this gene is ldcA [C]

Identifier: 170077219

GI number: 170077219

Start: 623052

End: 623966

Strand: Direct

Name: ldcA [C]

Synonym: SYNPCC7002_A0594

Alternate gene names: 170077219

Gene position: 623052-623966 (Clockwise)

Preceding gene: 170077218

Following gene: 170077220

Centisome position: 20.71

GC content: 51.8

Gene sequence:

>915_bases
ATGAATAAATTGATGCTGCCCCCTTGGTTACAACCGGGGGATTTATTGAAAGTGATTGCCCCTAGTGGTCGTTTGCTAGA
GCAGGATGCCTTTTGGGCTGGGGTAGATATTTGGCGATCGCAAGGATATCAGGTAGAACTGACGGCGGGTTGGGATGCGC
GCTGGGGCTATTTAGCGGGCAACGATCAGGGGCGACGGGACGCCTTAGCAGAAGCTTGGTTTGACCCAGATTGCAAAGGC
ATTCTCTGTGCGCGGGGCGGTTATGGCGGGATGCGCCTCCTAGAAAATTGGGACTGGAAAATCGACCAAGTGACTCCCAA
ATGGCTGATCGGCTTTTCGGACATTACCAGTCTATTGTGGAGTTTAGGCACGGTGGGCATTGCCAGTATCCACGGCCCCG
TTTTAACTACTTTTGCGGCAGAACCCGATTGGTCTAGGCAAAGATTATTTGATTTCTTGACGGGAAAACCCCTTGAAGCG
CTCCAGGGCAAGGGCTGGGGCAATGGCCAAGCTGAAGGAATTTTATTGCCCGCAAATTTGACGGTGGCGACCCACATTCT
CAAAACACCGTTACAGCCGAATTTTAAGAATGTCATTCTGGCCCTCGAAGACGTGACAGAAGCGCCCTACCGCATTGATC
GCCTGTTAACTCAATGGCGACTGCTGGGGGCTTTTGAAAAAATCAAAGGCATTGCCCTCGGTCGTTTTAGCCAATGTGAT
GAGTTGGGTTCAGCGGACAGTTTTAGCGTTATGGAAGTGCTTGGCGATCGCCTCCAGGATTTAAACATTCCGATTGTCGC
CGAGTTGCCCTTTGGCCATGATGGGATTAATGCCGCTTTACCCGTGGGGGTTCCGGTAATTTTAGATGGCGATCGCGGTT
TACTCTCTTTCCCGGAGAAGCCGACCCCCCATTAG

Upstream 100 bases:

>100_bases
GGGTTTAATGATTTTTCTCTGGCGCTGGGAAAACAAAAATAAACTCGCCAGTCAAGAGAAAGAATAAGCTGGATCTCACC
AATTGGCCCGTTAATTTTAA

Downstream 100 bases:

>100_bases
CACCGCTTCGGCAATGGGGTAAACTGGATCCCTGTGCATTGTAAGGAAAGCATTAGTAGGAAAGCCGTGCGAAAGATCAT
TATTGCGGGTAATTGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNKLMLPPWLQPGDLLKVIAPSGRLLEQDAFWAGVDIWRSQGYQVELTAGWDARWGYLAGNDQGRRDALAEAWFDPDCKG
ILCARGGYGGMRLLENWDWKIDQVTPKWLIGFSDITSLLWSLGTVGIASIHGPVLTTFAAEPDWSRQRLFDFLTGKPLEA
LQGKGWGNGQAEGILLPANLTVATHILKTPLQPNFKNVILALEDVTEAPYRIDRLLTQWRLLGAFEKIKGIALGRFSQCD
ELGSADSFSVMEVLGDRLQDLNIPIVAELPFGHDGINAALPVGVPVILDGDRGLLSFPEKPTPH

Sequences:

>Translated_304_residues
MNKLMLPPWLQPGDLLKVIAPSGRLLEQDAFWAGVDIWRSQGYQVELTAGWDARWGYLAGNDQGRRDALAEAWFDPDCKG
ILCARGGYGGMRLLENWDWKIDQVTPKWLIGFSDITSLLWSLGTVGIASIHGPVLTTFAAEPDWSRQRLFDFLTGKPLEA
LQGKGWGNGQAEGILLPANLTVATHILKTPLQPNFKNVILALEDVTEAPYRIDRLLTQWRLLGAFEKIKGIALGRFSQCD
ELGSADSFSVMEVLGDRLQDLNIPIVAELPFGHDGINAALPVGVPVILDGDRGLLSFPEKPTPH
>Mature_304_residues
MNKLMLPPWLQPGDLLKVIAPSGRLLEQDAFWAGVDIWRSQGYQVELTAGWDARWGYLAGNDQGRRDALAEAWFDPDCKG
ILCARGGYGGMRLLENWDWKIDQVTPKWLIGFSDITSLLWSLGTVGIASIHGPVLTTFAAEPDWSRQRLFDFLTGKPLEA
LQGKGWGNGQAEGILLPANLTVATHILKTPLQPNFKNVILALEDVTEAPYRIDRLLTQWRLLGAFEKIKGIALGRFSQCD
ELGSADSFSVMEVLGDRLQDLNIPIVAELPFGHDGINAALPVGVPVILDGDRGLLSFPEKPTPH

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=288, Percent_Identity=30.5555555555556, Blast_Score=111, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 33505; Mature: 33505

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLMLPPWLQPGDLLKVIAPSGRLLEQDAFWAGVDIWRSQGYQVELTAGWDARWGYLAG
CCCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEC
NDQGRRDALAEAWFDPDCKGILCARGGYGGMRLLENWDWKIDQVTPKWLIGFSDITSLLW
CCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHCCCCEEECCCHHHEECHHHHHHHHH
SLGTVGIASIHGPVLTTFAAEPDWSRQRLFDFLTGKPLEALQGKGWGNGQAEGILLPANL
HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEECCH
TVATHILKTPLQPNFKNVILALEDVTEAPYRIDRLLTQWRLLGAFEKIKGIALGRFSQCD
HHHHHHHHCCCCCCHHHEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ELGSADSFSVMEVLGDRLQDLNIPIVAELPFGHDGINAALPVGVPVILDGDRGLLSFPEK
HCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEECCCCEEEEEECCCCCCCCCCC
PTPH
CCCC
>Mature Secondary Structure
MNKLMLPPWLQPGDLLKVIAPSGRLLEQDAFWAGVDIWRSQGYQVELTAGWDARWGYLAG
CCCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEC
NDQGRRDALAEAWFDPDCKGILCARGGYGGMRLLENWDWKIDQVTPKWLIGFSDITSLLW
CCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHCCCCEEECCCHHHEECHHHHHHHHH
SLGTVGIASIHGPVLTTFAAEPDWSRQRLFDFLTGKPLEALQGKGWGNGQAEGILLPANL
HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEECCH
TVATHILKTPLQPNFKNVILALEDVTEAPYRIDRLLTQWRLLGAFEKIKGIALGRFSQCD
HHHHHHHHCCCCCCHHHEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ELGSADSFSVMEVLGDRLQDLNIPIVAELPFGHDGINAALPVGVPVILDGDRGLLSFPEK
HCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEECCCCEEEEEECCCCCCCCCCC
PTPH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]