| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077218
Identifier: 170077218
GI number: 170077218
Start: 622752
End: 623018
Strand: Direct
Name: 170077218
Synonym: SYNPCC7002_A0593
Alternate gene names: NA
Gene position: 622752-623018 (Clockwise)
Preceding gene: 170077217
Following gene: 170077219
Centisome position: 20.7
GC content: 47.94
Gene sequence:
>267_bases ATGAGTCAAAAGTTCACCCCCGAAAAAATGGCCCGTCTACGGGCGGAAGCCAAAAATCCTTACCGTTCGCTCCGCCAATT TATTTATCTATGCTTTGGGTTGTCTGGGGGCATTGGGGGGATGATTTTTCTGTTGCAAATTGCCGCTGGGCGAGATTTAG ACCAGGCGATTCCGAATCTGGCGGTGCAGGCTGGGGTTGTGGGTTTAATGATTTTTCTCTGGCGCTGGGAAAACAAAAAT AAACTCGCCAGTCAAGAGAAAGAATAA
Upstream 100 bases:
>100_bases GCGCGACACCGTCAACCTGGCTTTTTTCCAAAATTTAATTCGTTAATTTCTTTGTTCCGTAGGGGTTAACGCTGGTTAAT CCCTCGCAATTGATACAACC
Downstream 100 bases:
>100_bases GCTGGATCTCACCAATTGGCCCGTTAATTTTAAATGAATAAATTGATGCTGCCCCCTTGGTTACAACCGGGGGATTTATT GAAAGTGATTGCCCCTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSQKFTPEKMARLRAEAKNPYRSLRQFIYLCFGLSGGIGGMIFLLQIAAGRDLDQAIPNLAVQAGVVGLMIFLWRWENKN KLASQEKE
Sequences:
>Translated_88_residues MSQKFTPEKMARLRAEAKNPYRSLRQFIYLCFGLSGGIGGMIFLLQIAAGRDLDQAIPNLAVQAGVVGLMIFLWRWENKN KLASQEKE >Mature_87_residues SQKFTPEKMARLRAEAKNPYRSLRQFIYLCFGLSGGIGGMIFLLQIAAGRDLDQAIPNLAVQAGVVGLMIFLWRWENKNK LASQEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9946; Mature: 9815
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKFTPEKMARLRAEAKNPYRSLRQFIYLCFGLSGGIGGMIFLLQIAAGRDLDQAIPNL CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH AVQAGVVGLMIFLWRWENKNKLASQEKE HHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SQKFTPEKMARLRAEAKNPYRSLRQFIYLCFGLSGGIGGMIFLLQIAAGRDLDQAIPNL CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH AVQAGVVGLMIFLWRWENKNKLASQEKE HHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA