| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yaeL [C]
Identifier: 170077217
GI number: 170077217
Start: 621606
End: 622697
Strand: Direct
Name: yaeL [C]
Synonym: SYNPCC7002_A0592
Alternate gene names: 170077217
Gene position: 621606-622697 (Clockwise)
Preceding gene: 170077209
Following gene: 170077218
Centisome position: 20.66
GC content: 52.56
Gene sequence:
>1092_bases ATGTCCGTACTGGCGGCGATCGCAGTTTTGGCACTCCTCATCGTGATCCATGAGTTGGGTCACTTCTCAGCAGCCCGACT TCAAAATATCCATGTCAACCGCTTTTCCATTGGCTTTGGGCCGACCCTGCTCAAATACCAAGGCAAAGAAACCGAGTATG CGGTGCGCGCCTTCCCCCTCGGTGGCTATGTGGGCTTCCCCGATGACGACCCAGACAGTGATATTCCCCCAGAAGACCCG AACCTCTTGCGTAATCGTCCCGTCTTTGACCGGGCGATCGTGATCAGTGCCGGGGTCATTGCCAATTTAATTTTTGCCTA CTTCCTCCTCGTGGTACAGGCAGGCACCGTGGGTTTTCAAGATATTAACTATCAACCGGGTGTACGCATTCCCCAAGTAT TAACCGAAGTAGACTCCCCGGCAGCCGCAGCAGGTATTCAAAGCGAAGATATTGTCCTAGCTGTTAATGGCCAAACCCTC CTCAGTGGCCAAGCCGCCCTTGAGGAATTGCGGGTGCTGATTCAGGAGGCTCCCAACGAAACCCTTAATCTGCAACTCCA ACGGGGCGAAGCAACGCTCACTGTAGATGTAACCCCCGATGCGGGGAGTGATGGGCAAGGAAAAATTGGGGTGATGTTAG CTCCCAATGGTGAAATTGTGCGCAACCGTGCCGGTAACCCCATTGCGGCCCTCCAGGCAGGCTCCCGGGAGTTTCAGCGG CTTGCCAGTCTCACAGTGCAAGGCTTTGGTCAACTCATCTTCAATTTCCAAGAAACAGCCCAACAGGTGGCTGGCCCCGT GGCGATCGTGGCGGTGGGAGCCGATTTAGCAAAAGATGATCTAAGTAATCTGTTCCAATTTGGTTCACTCATCAGCATTA ACCTGGCGATTATTAATATTTTGCCCTTACCCGCTTTAGACGGCGGCCAACTGGCCTTTCTCCTAGTAGAAGGAATTCGC GGTAAACCTCTGCCGATGCGCCTCCAGGAAAACATTATGCAAACGGGCTTAGTCCTGTTACTTGGCCTTGGGGTTTTTCT CATCGTGCGCGACACCGTCAACCTGGCTTTTTTCCAAAATTTAATTCGTTAA
Upstream 100 bases:
>100_bases TTGAGGCTGCCGCTCACCCAGGTCTTTCTCCCATAACTCCGATGGCGATCGCCTACAATAGCTAGAACATAAAAAATCAC TACAACATCAAGAGAACGTT
Downstream 100 bases:
>100_bases TTTCTTTGTTCCGTAGGGGTTAACGCTGGTTAATCCCTCGCAATTGATACAACCATGAGTCAAAAGTTCACCCCCGAAAA AATGGCCCGTCTACGGGCGG
Product: membrane-associated zinc-dependent metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSVLAAIAVLALLIVIHELGHFSAARLQNIHVNRFSIGFGPTLLKYQGKETEYAVRAFPLGGYVGFPDDDPDSDIPPEDP NLLRNRPVFDRAIVISAGVIANLIFAYFLLVVQAGTVGFQDINYQPGVRIPQVLTEVDSPAAAAGIQSEDIVLAVNGQTL LSGQAALEELRVLIQEAPNETLNLQLQRGEATLTVDVTPDAGSDGQGKIGVMLAPNGEIVRNRAGNPIAALQAGSREFQR LASLTVQGFGQLIFNFQETAQQVAGPVAIVAVGADLAKDDLSNLFQFGSLISINLAIINILPLPALDGGQLAFLLVEGIR GKPLPMRLQENIMQTGLVLLLGLGVFLIVRDTVNLAFFQNLIR
Sequences:
>Translated_363_residues MSVLAAIAVLALLIVIHELGHFSAARLQNIHVNRFSIGFGPTLLKYQGKETEYAVRAFPLGGYVGFPDDDPDSDIPPEDP NLLRNRPVFDRAIVISAGVIANLIFAYFLLVVQAGTVGFQDINYQPGVRIPQVLTEVDSPAAAAGIQSEDIVLAVNGQTL LSGQAALEELRVLIQEAPNETLNLQLQRGEATLTVDVTPDAGSDGQGKIGVMLAPNGEIVRNRAGNPIAALQAGSREFQR LASLTVQGFGQLIFNFQETAQQVAGPVAIVAVGADLAKDDLSNLFQFGSLISINLAIINILPLPALDGGQLAFLLVEGIR GKPLPMRLQENIMQTGLVLLLGLGVFLIVRDTVNLAFFQNLIR >Mature_362_residues SVLAAIAVLALLIVIHELGHFSAARLQNIHVNRFSIGFGPTLLKYQGKETEYAVRAFPLGGYVGFPDDDPDSDIPPEDPN LLRNRPVFDRAIVISAGVIANLIFAYFLLVVQAGTVGFQDINYQPGVRIPQVLTEVDSPAAAAGIQSEDIVLAVNGQTLL SGQAALEELRVLIQEAPNETLNLQLQRGEATLTVDVTPDAGSDGQGKIGVMLAPNGEIVRNRAGNPIAALQAGSREFQRL ASLTVQGFGQLIFNFQETAQQVAGPVAIVAVGADLAKDDLSNLFQFGSLISINLAIINILPLPALDGGQLAFLLVEGIRG KPLPMRLQENIMQTGLVLLLGLGVFLIVRDTVNLAFFQNLIR
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=220, Percent_Identity=32.2727272727273, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 38784; Mature: 38653
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLAAIAVLALLIVIHELGHFSAARLQNIHVNRFSIGFGPTLLKYQGKETEYAVRAFPL CHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEEEEECCCCCEEEEECCCCCCEEEEEEEC GGYVGFPDDDPDSDIPPEDPNLLRNRPVFDRAIVISAGVIANLIFAYFLLVVQAGTVGFQ CCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DINYQPGVRIPQVLTEVDSPAAAAGIQSEDIVLAVNGQTLLSGQAALEELRVLIQEAPNE CCCCCCCCCHHHHHHHCCCCHHHCCCCCCCEEEEECCCCEECHHHHHHHHHHHHHHCCCC TLNLQLQRGEATLTVDVTPDAGSDGQGKIGVMLAPNGEIVRNRAGNPIAALQAGSREFQR EEEEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCEEEHHCCHHHHHH LASLTVQGFGQLIFNFQETAQQVAGPVAIVAVGADLAKDDLSNLFQFGSLISINLAIINI HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEEE LPLPALDGGQLAFLLVEGIRGKPLPMRLQENIMQTGLVLLLGLGVFLIVRDTVNLAFFQN ECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIR HHC >Mature Secondary Structure SVLAAIAVLALLIVIHELGHFSAARLQNIHVNRFSIGFGPTLLKYQGKETEYAVRAFPL HHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEEEEECCCCCEEEEECCCCCCEEEEEEEC GGYVGFPDDDPDSDIPPEDPNLLRNRPVFDRAIVISAGVIANLIFAYFLLVVQAGTVGFQ CCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DINYQPGVRIPQVLTEVDSPAAAAGIQSEDIVLAVNGQTLLSGQAALEELRVLIQEAPNE CCCCCCCCCHHHHHHHCCCCHHHCCCCCCCEEEEECCCCEECHHHHHHHHHHHHHHCCCC TLNLQLQRGEATLTVDVTPDAGSDGQGKIGVMLAPNGEIVRNRAGNPIAALQAGSREFQR EEEEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCCEEEHHCCHHHHHH LASLTVQGFGQLIFNFQETAQQVAGPVAIVAVGADLAKDDLSNLFQFGSLISINLAIINI HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEEE LPLPALDGGQLAFLLVEGIRGKPLPMRLQENIMQTGLVLLLGLGVFLIVRDTVNLAFFQN ECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIR HHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]