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The map label for this gene is lytH [H]

Identifier: 170077209

GI number: 170077209

Start: 610431

End: 612200

Strand: Direct

Name: lytH [H]

Synonym: SYNPCC7002_A0584

Alternate gene names: 170077209

Gene position: 610431-612200 (Clockwise)

Preceding gene: 170077208

Following gene: 170077217

Centisome position: 20.29

GC content: 56.38

Gene sequence:

>1770_bases
ATGTTTAAAGCGATCGCCCTCAGTTCTGGTATTGCCGTGGCCCTGACCTTTCCGGCGATCGCCCAGTTTCCCCGCCAAAG
CGATCGCCTCCAATTGGTCTACCCCCCAAACAATCACCAAACCAGCGCCGCCCAGATTTTCTTGATTGGCTCAGCCCCAG
CGGCGGGCACCGTGGCGATCAATGGTCAACCGATTACCCGGAGTGACTTTGGCCATTTTGCTCCCAGTTTGCCCTTGGCG
GTGGGTCAAAACCAAATCACCCTGACCTATCGTCAGCCTTCGGGACAGACGGAAACAAAAACCCTCACCGTTGAGCGTTT
GGCGAACAATACAATGCCGCCCAACCAACTCGAAGCCCCTTTCCCGGCGGTGGATATTGCCCGGCAAGCCGACGAGACAA
TTTGTTTCCAAGTCCAGGGGCCAGCCCAAGCCCAAGTTAGGGTTGCCCTCGGCGGAAAATCTTTTTCCCTACAACCCCAG
ACCACGGTGACGCTCCCCAGCAATGCCGCCGTCTTAACCCTAGAGAATGAAGCTCCTGCCGAAGTTTTTACGGGAACCTA
CGGGGGCTGTCAGCGCTTTACCCAAGGCGGGAACCTCGGCCAAGCCCGTTACCAGATGAATGTCCAGGGGCAAACCAGCA
CCGCCACCAGCCCCGGTCGCATCGAAATTTTAGACACCCAAAATACTGAGGCGATCGCCGTCACCAGTTTAGCAGGGGTG
GCCCGCACAGGCCCCAGTACCAATTTTTCCCGCCTCACGCCCTTGCCCCAGGGAACCCAGGCCCTGGTTACTGGCAAAGA
AGGGGATTGGTTGCGTTTAGACTATGGCGCTTGGATTCGCGCTTCGGAGACCACACCGATCCAGGGTGCAGTGACGCCGA
CGACATTGATTCGCAGCCTGCGATCGCAAACCACCGCCACGGAAACAAACGTTATTTTTCCCCTCCAAAGACCCGTACCA
GTTACCGTCAGTCAAAATGACGACACCTTTAGCCTGACCCTCCACCAGGCGATCGCCCAAACTGACACCATTTATCTAGA
TGACAGTCCAATTATCCGCCGCCTCGACTGGGCACAGCTTGATCCAGAAACGATCCGCTATGATTTCCGCCTCAAAACAG
ACCAACAATGGGGCCATTCACTGCGTTATGAAGGCAGCAATTTAATTTTGTCCCTCCGCCACCCGCCACAACTCCAGGGG
AATTCGCTCCGGGGCGCGACCATTTGGCTCGATCCTGGCCATGGGGGGGCTGAATCCGGTGCCTTGGGGCCAACGGGCTA
CCCTGAAAAAGCAATTAATTTGCTCATTTCCCAAAAAATTCAAAAACAACTGGAAGCCAAGGGCGCGGAAGTGATCCTCA
GCCGTACCACGGATCAAGATTTATCCCTAGGCGATCGCCAGGCCGCGATTCGCGACCTCCAGCCCACTTTGGCCCTGTCT
GTCCATTACAACGCTCTGCCCGATGCGGGGGACGCGGAAAATACGGCGGGAATCGGGATGTTTTGGTACCATCCCCAGGC
CCATGACCTGGCGCAGTTTCTCCACGACGACTTAACGACGCAGTTAGGCCGTCCCAGTTATGGTGTCTTTTGGAATAACC
TAGCCCTAACCCGGCCCCAGGAAGCTCCGGCGGTTTTGATGGAGTTGGGTTTTATGATTAATCCCACGGAGTTTGAGTGG
ATTACCGATCCCCAGGCCCAGGAAGAACTCGCCGGGGCGATCGCCACGGCAGTTGAAACCTGGCTGCAAACCAAGGCGAT
CGCTCAATAA

Upstream 100 bases:

>100_bases
GTGGTTCAGGGGGATAGTACCCTCTAGGTTTCAACGCCTCAAAGAACGCTGTCTCGATGGAGATGGCCTTTGTAAGCTTA
AAAAGTTAAGGACAAGATTT

Downstream 100 bases:

>100_bases
TCCCTAGGGAGCCGCCGGGGCAATCACCGCATCCCCTAAACCGACTTCCCGTTTCAGTTGGGCAAAGGCACGATTGTAAT
CGGTGACTGCCTGAAGATAG

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MFKAIALSSGIAVALTFPAIAQFPRQSDRLQLVYPPNNHQTSAAQIFLIGSAPAAGTVAINGQPITRSDFGHFAPSLPLA
VGQNQITLTYRQPSGQTETKTLTVERLANNTMPPNQLEAPFPAVDIARQADETICFQVQGPAQAQVRVALGGKSFSLQPQ
TTVTLPSNAAVLTLENEAPAEVFTGTYGGCQRFTQGGNLGQARYQMNVQGQTSTATSPGRIEILDTQNTEAIAVTSLAGV
ARTGPSTNFSRLTPLPQGTQALVTGKEGDWLRLDYGAWIRASETTPIQGAVTPTTLIRSLRSQTTATETNVIFPLQRPVP
VTVSQNDDTFSLTLHQAIAQTDTIYLDDSPIIRRLDWAQLDPETIRYDFRLKTDQQWGHSLRYEGSNLILSLRHPPQLQG
NSLRGATIWLDPGHGGAESGALGPTGYPEKAINLLISQKIQKQLEAKGAEVILSRTTDQDLSLGDRQAAIRDLQPTLALS
VHYNALPDAGDAENTAGIGMFWYHPQAHDLAQFLHDDLTTQLGRPSYGVFWNNLALTRPQEAPAVLMELGFMINPTEFEW
ITDPQAQEELAGAIATAVETWLQTKAIAQ

Sequences:

>Translated_589_residues
MFKAIALSSGIAVALTFPAIAQFPRQSDRLQLVYPPNNHQTSAAQIFLIGSAPAAGTVAINGQPITRSDFGHFAPSLPLA
VGQNQITLTYRQPSGQTETKTLTVERLANNTMPPNQLEAPFPAVDIARQADETICFQVQGPAQAQVRVALGGKSFSLQPQ
TTVTLPSNAAVLTLENEAPAEVFTGTYGGCQRFTQGGNLGQARYQMNVQGQTSTATSPGRIEILDTQNTEAIAVTSLAGV
ARTGPSTNFSRLTPLPQGTQALVTGKEGDWLRLDYGAWIRASETTPIQGAVTPTTLIRSLRSQTTATETNVIFPLQRPVP
VTVSQNDDTFSLTLHQAIAQTDTIYLDDSPIIRRLDWAQLDPETIRYDFRLKTDQQWGHSLRYEGSNLILSLRHPPQLQG
NSLRGATIWLDPGHGGAESGALGPTGYPEKAINLLISQKIQKQLEAKGAEVILSRTTDQDLSLGDRQAAIRDLQPTLALS
VHYNALPDAGDAENTAGIGMFWYHPQAHDLAQFLHDDLTTQLGRPSYGVFWNNLALTRPQEAPAVLMELGFMINPTEFEW
ITDPQAQEELAGAIATAVETWLQTKAIAQ
>Mature_589_residues
MFKAIALSSGIAVALTFPAIAQFPRQSDRLQLVYPPNNHQTSAAQIFLIGSAPAAGTVAINGQPITRSDFGHFAPSLPLA
VGQNQITLTYRQPSGQTETKTLTVERLANNTMPPNQLEAPFPAVDIARQADETICFQVQGPAQAQVRVALGGKSFSLQPQ
TTVTLPSNAAVLTLENEAPAEVFTGTYGGCQRFTQGGNLGQARYQMNVQGQTSTATSPGRIEILDTQNTEAIAVTSLAGV
ARTGPSTNFSRLTPLPQGTQALVTGKEGDWLRLDYGAWIRASETTPIQGAVTPTTLIRSLRSQTTATETNVIFPLQRPVP
VTVSQNDDTFSLTLHQAIAQTDTIYLDDSPIIRRLDWAQLDPETIRYDFRLKTDQQWGHSLRYEGSNLILSLRHPPQLQG
NSLRGATIWLDPGHGGAESGALGPTGYPEKAINLLISQKIQKQLEAKGAEVILSRTTDQDLSLGDRQAAIRDLQPTLALS
VHYNALPDAGDAENTAGIGMFWYHPQAHDLAQFLHDDLTTQLGRPSYGVFWNNLALTRPQEAPAVLMELGFMINPTEFEW
ITDPQAQEELAGAIATAVETWLQTKAIAQ

Specific function: Probably involved in cell-wall metabolism [H]

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017273
- InterPro:   IPR002508
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01520 Amidase_3; PF08239 SH3_3 [H]

EC number: 3.5.1.28

Molecular weight: Translated: 63816; Mature: 63816

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKAIALSSGIAVALTFPAIAQFPRQSDRLQLVYPPNNHQTSAAQIFLIGSAPAAGTVAI
CCEEEEECCCCEEEEECHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCEEEE
NGQPITRSDFGHFAPSLPLAVGQNQITLTYRQPSGQTETKTLTVERLANNTMPPNQLEAP
CCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCEEEEHHHHHCCCCCCCCCCCC
FPAVDIARQADETICFQVQGPAQAQVRVALGGKSFSLQPQTTVTLPSNAAVLTLENEAPA
CCHHHHHHCCCCEEEEEECCCCCEEEEEEECCCEEEECCCEEEEECCCEEEEEECCCCCC
EVFTGTYGGCQRFTQGGNLGQARYQMNVQGQTSTATSPGRIEILDTQNTEAIAVTSLAGV
HHCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEHHHH
ARTGPSTNFSRLTPLPQGTQALVTGKEGDWLRLDYGAWIRASETTPIQGAVTPTTLIRSL
HCCCCCCCHHHCCCCCCCCEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCHHHHHHHH
RSQTTATETNVIFPLQRPVPVTVSQNDDTFSLTLHQAIAQTDTIYLDDSPIIRRLDWAQL
HHCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEHHHHHCCCEEEECCCHHHHHCCHHCC
DPETIRYDFRLKTDQQWGHSLRYEGSNLILSLRHPPQLQGNSLRGATIWLDPGHGGAESG
CHHHEEEEEEECCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCC
ALGPTGYPEKAINLLISQKIQKQLEAKGAEVILSRTTDQDLSLGDRQAAIRDLQPTLALS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHCCCEEEEE
VHYNALPDAGDAENTAGIGMFWYHPQAHDLAQFLHDDLTTQLGRPSYGVFWNNLALTRPQ
EEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCC
EAPAVLMELGFMINPTEFEWITDPQAQEELAGAIATAVETWLQTKAIAQ
CCCHHHHHCCCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKAIALSSGIAVALTFPAIAQFPRQSDRLQLVYPPNNHQTSAAQIFLIGSAPAAGTVAI
CCEEEEECCCCEEEEECHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCEEEE
NGQPITRSDFGHFAPSLPLAVGQNQITLTYRQPSGQTETKTLTVERLANNTMPPNQLEAP
CCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCEEEEHHHHHCCCCCCCCCCCC
FPAVDIARQADETICFQVQGPAQAQVRVALGGKSFSLQPQTTVTLPSNAAVLTLENEAPA
CCHHHHHHCCCCEEEEEECCCCCEEEEEEECCCEEEECCCEEEEECCCEEEEEECCCCCC
EVFTGTYGGCQRFTQGGNLGQARYQMNVQGQTSTATSPGRIEILDTQNTEAIAVTSLAGV
HHCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEHHHH
ARTGPSTNFSRLTPLPQGTQALVTGKEGDWLRLDYGAWIRASETTPIQGAVTPTTLIRSL
HCCCCCCCHHHCCCCCCCCEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCHHHHHHHH
RSQTTATETNVIFPLQRPVPVTVSQNDDTFSLTLHQAIAQTDTIYLDDSPIIRRLDWAQL
HHCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEHHHHHCCCEEEECCCHHHHHCCHHCC
DPETIRYDFRLKTDQQWGHSLRYEGSNLILSLRHPPQLQGNSLRGATIWLDPGHGGAESG
CHHHEEEEEEECCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCC
ALGPTGYPEKAINLLISQKIQKQLEAKGAEVILSRTTDQDLSLGDRQAAIRDLQPTLALS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHCCCEEEEE
VHYNALPDAGDAENTAGIGMFWYHPQAHDLAQFLHDDLTTQLGRPSYGVFWNNLALTRPQ
EEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCC
EAPAVLMELGFMINPTEFEWITDPQAQEELAGAIATAVETWLQTKAIAQ
CCCHHHHHCCCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA