Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077130

Identifier: 170077130

GI number: 170077130

Start: 535286

End: 535870

Strand: Direct

Name: 170077130

Synonym: SYNPCC7002_A0505

Alternate gene names: NA

Gene position: 535286-535870 (Clockwise)

Preceding gene: 170077129

Following gene: 170077132

Centisome position: 17.8

GC content: 38.63

Gene sequence:

>585_bases
ATGGCAAATCAATATAATCCGCAAATTCATCATCGGCGCTCCATTCGTTTGAAATCTTATGATTACAACCGGTCAGGCGC
ATATTTTGTGACAATTTGTGTGCAGGCCCGTGAATGTTTACTTGGCACGATCACGGATCAAATCTTGCACTTAAACGAGT
GTGGAAAAATTGTTGAACAAGTTTGGAATTATTTGCCTAGACATTTTGAAAATCTAGAAATTGATGCCGCCGTGATTATG
CCCAATCATTTTCATTGCATCTTAATTTGTACCGAACCTGAAACGCCAGATTTCCCTGTGCCACCGCCAAAAGATGCTTT
TAACGCTATTCACAACAAAGGCGATCGCCCTTTTTACGAACAAAAAACAAACCTCGGCAAAATCATCGCCTATTTTAAAT
ATCAAACAACGAAAAAAATCAACCAAAAACGCGGTCTGGTTGGGACAAAAATTTGGCAAAAAAACTATTACGAGCACATT
ATTCGTAATGGAAAATCTCTCAATATCCTCAGAGAATACATAGAAAATAATCCCTACAATTGGCACACCGACCAATTACA
CCCCAATATTCCATCGAAATGGTAG

Upstream 100 bases:

>100_bases
GCTCGTTTCCCAACCCGTTAACCATCCGTAGGGGCTTGGTTCCCATGCCCTTAGTTTCTATTATTTTGGATTTGGAAACC
AAACCCCTACGGTTATTGCG

Downstream 100 bases:

>100_bases
GGATTTGGTTGCCAGGGGATTTCATAATAATGGGATTTGGAGACCAAATCCCTACGGGAAAAACGGGACTGGCCGGATTC
GAACCGGCGACCTAGCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MANQYNPQIHHRRSIRLKSYDYNRSGAYFVTICVQARECLLGTITDQILHLNECGKIVEQVWNYLPRHFENLEIDAAVIM
PNHFHCILICTEPETPDFPVPPPKDAFNAIHNKGDRPFYEQKTNLGKIIAYFKYQTTKKINQKRGLVGTKIWQKNYYEHI
IRNGKSLNILREYIENNPYNWHTDQLHPNIPSKW

Sequences:

>Translated_194_residues
MANQYNPQIHHRRSIRLKSYDYNRSGAYFVTICVQARECLLGTITDQILHLNECGKIVEQVWNYLPRHFENLEIDAAVIM
PNHFHCILICTEPETPDFPVPPPKDAFNAIHNKGDRPFYEQKTNLGKIIAYFKYQTTKKINQKRGLVGTKIWQKNYYEHI
IRNGKSLNILREYIENNPYNWHTDQLHPNIPSKW
>Mature_193_residues
ANQYNPQIHHRRSIRLKSYDYNRSGAYFVTICVQARECLLGTITDQILHLNECGKIVEQVWNYLPRHFENLEIDAAVIMP
NHFHCILICTEPETPDFPVPPPKDAFNAIHNKGDRPFYEQKTNLGKIIAYFKYQTTKKINQKRGLVGTKIWQKNYYEHII
RNGKSLNILREYIENNPYNWHTDQLHPNIPSKW

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22981; Mature: 22849

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQYNPQIHHRRSIRLKSYDYNRSGAYFVTICVQARECLLGTITDQILHLNECGKIVEQ
CCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VWNYLPRHFENLEIDAAVIMPNHFHCILICTEPETPDFPVPPPKDAFNAIHNKGDRPFYE
HHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHH
QKTNLGKIIAYFKYQTTKKINQKRGLVGTKIWQKNYYEHIIRNGKSLNILREYIENNPYN
HHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
WHTDQLHPNIPSKW
CCCCCCCCCCCCCC
>Mature Secondary Structure 
ANQYNPQIHHRRSIRLKSYDYNRSGAYFVTICVQARECLLGTITDQILHLNECGKIVEQ
CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VWNYLPRHFENLEIDAAVIMPNHFHCILICTEPETPDFPVPPPKDAFNAIHNKGDRPFYE
HHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHH
QKTNLGKIIAYFKYQTTKKINQKRGLVGTKIWQKNYYEHIIRNGKSLNILREYIENNPYN
HHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
WHTDQLHPNIPSKW
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]